RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 ARHGAP5Q13017 1502 aa31.79■■■□□ 2.68
TSPAN3-207ENST00000559494 CDC42BPAQ5VT25 1732 aa31.79■■■□□ 2.68
TSPAN3-207ENST00000559494 CCNB3Q8WWL7 1395 aa31.79■■■□□ 2.68
TSPAN3-207ENST00000559494 CFAP74Q9C0B2 1584 aa31.77■■■□□ 2.68
TSPAN3-207ENST00000559494 RAPGEF3O95398 923 aa31.77■■■□□ 2.68
TSPAN3-207ENST00000559494 NCOA2Q15596 1464 aa31.77■■■□□ 2.68
TSPAN3-207ENST00000559494 PREX2Q70Z35 1606 aa31.76■■■□□ 2.68
TSPAN3-207ENST00000559494 SUPT6HQ7KZ85 1726 aaKnown RBP31.75■■■□□ 2.67
TSPAN3-207ENST00000559494 CFDP1Q9UEE9 299 aaPredicted RBP31.73■■■□□ 2.67
TSPAN3-207ENST00000559494 SCAPERQ9BY12 1400 aa31.72■■■□□ 2.67
TSPAN3-207ENST00000559494 ADGRL1O94910 1474 aa31.71■■■□□ 2.67
TSPAN3-207ENST00000559494 DENND4BO75064 1496 aaPredicted RBP31.7■■■□□ 2.67
TSPAN3-207ENST00000559494 ZNF777Q9ULD5 760 aaPredicted RBP31.7■■■□□ 2.66
TSPAN3-207ENST00000559494 FRMPD1Q5SYB0 1578 aa31.63■■■□□ 2.65
TSPAN3-207ENST00000559494 RICTORQ6R327 1708 aa31.61■■■□□ 2.65
TSPAN3-207ENST00000559494 ZNF644Q9H582 1327 aaPredicted RBP31.61■■■□□ 2.65
TSPAN3-207ENST00000559494 ARHGEF12Q9NZN5 1544 aa31.61■■■□□ 2.65
TSPAN3-207ENST00000559494 SAMD9LQ8IVG5 1584 aa31.6■■■□□ 2.65
TSPAN3-207ENST00000559494 ITSN2Q9NZM3 1697 aa31.59■■■□□ 2.65
TSPAN3-207ENST00000559494 AFAP1Q8N556 730 aa31.59■■■□□ 2.65
TSPAN3-207ENST00000559494 POGZQ7Z3K3 1410 aa31.58■■■□□ 2.65
TSPAN3-207ENST00000559494 ABCC1P33527 1531 aa31.58■■■□□ 2.65
TSPAN3-207ENST00000559494 HNRNPMP52272 730 aaKnown RBP eCLIP31.57■■■□□ 2.64
TSPAN3-207ENST00000559494 TRAPPC8Q9Y2L5 1435 aa31.55■■■□□ 2.64
TSPAN3-207ENST00000559494 PPARGC1BQ86YN6 1023 aaKnown RBP31.54■■■□□ 2.64
TSPAN3-207ENST00000559494 MYOM3Q5VTT5 1437 aa31.53■■■□□ 2.64
TSPAN3-207ENST00000559494 KIAA1107Q9UPP5 1409 aa31.53■■■□□ 2.64
TSPAN3-207ENST00000559494 PLEKHH2Q8IVE3 1493 aa31.51■■■□□ 2.63
TSPAN3-207ENST00000559494 ZNF518AQ6AHZ1 1483 aa31.5■■■□□ 2.63
TSPAN3-207ENST00000559494 SYCP2Q9BX26 1530 aa31.5■■■□□ 2.63
TSPAN3-207ENST00000559494 ZMYM4Q5VZL5 1548 aa31.49■■■□□ 2.63
TSPAN3-207ENST00000559494 MIA2Q96PC5 1412 aa31.47■■■□□ 2.63
TSPAN3-207ENST00000559494 MBD5Q9P267 1494 aa31.45■■■□□ 2.63
TSPAN3-207ENST00000559494 KDM5CP41229 1560 aa31.45■■■□□ 2.62
TSPAN3-207ENST00000559494 CAMSAP2Q08AD1 1489 aa31.44■■■□□ 2.62
TSPAN3-207ENST00000559494 YEATS2Q9ULM3 1422 aa31.43■■■□□ 2.62
TSPAN3-207ENST00000559494 MAGI2Q86UL8 1455 aa31.43■■■□□ 2.62
TSPAN3-207ENST00000559494 MYT1LQ9UL68 1186 aa31.4■■■□□ 2.62
TSPAN3-207ENST00000559494 ZFYVE16Q7Z3T8 1539 aa31.38■■■□□ 2.61
TSPAN3-207ENST00000559494 MLH3Q9UHC1 1453 aa31.38■■■□□ 2.61
TSPAN3-207ENST00000559494 FGD6Q6ZV73 1430 aa31.37■■■□□ 2.61
TSPAN3-207ENST00000559494 SPAG9O60271 1321 aaKnown RBP31.37■■■□□ 2.61
TSPAN3-207ENST00000559494 RSPH4AQ5TD94 716 aa31.36■■■□□ 2.61
TSPAN3-207ENST00000559494 ARHGEF40Q8TER5 1519 aa31.35■■■□□ 2.61
TSPAN3-207ENST00000559494 HECW2Q9P2P5 1572 aa31.34■■■□□ 2.61
TSPAN3-207ENST00000559494 PTPN23Q9H3S7 1636 aa31.32■■■□□ 2.6
TSPAN3-207ENST00000559494 KIDINS220Q9ULH0 1771 aa31.3■■■□□ 2.6
TSPAN3-207ENST00000559494 ATP10AO60312 1499 aa31.3■■■□□ 2.6
TSPAN3-207ENST00000559494 CCDC141Q6ZP82 1450 aa31.29■■■□□ 2.6
TSPAN3-207ENST00000559494 ARHGEF5Q12774 1597 aa31.28■■■□□ 2.6
TSPAN3-207ENST00000559494 TCOF1Q13428 1488 aaKnown RBP31.28■■■□□ 2.6
TSPAN3-207ENST00000559494 KDM4FA0A1W2PPD8 638 aa31.25■■■□□ 2.59
TSPAN3-207ENST00000559494 DIP2CQ9Y2E4 1556 aa31.25■■■□□ 2.59
TSPAN3-207ENST00000559494 TSPY4P0CV99 314 aa31.24■■■□□ 2.59
TSPAN3-207ENST00000559494 TSPY10P0CW01 314 aa31.24■■■□□ 2.59
TSPAN3-207ENST00000559494 ABCA6Q8N139 1617 aa31.24■■■□□ 2.59
TSPAN3-207ENST00000559494 ARID4BQ4LE39 1312 aaPredicted RBP31.24■■■□□ 2.59
TSPAN3-207ENST00000559494 ATP7AQ04656 1500 aa31.24■■■□□ 2.59
TSPAN3-207ENST00000559494 RTEL1-TNFRSF6BF6WH68 1400 aa31.23■■■□□ 2.59
TSPAN3-207ENST00000559494 C9orf84Q5VXU9 1444 aa31.23■■■□□ 2.59
TSPAN3-207ENST00000559494 FAM50AQ14320 339 aaKnown RBP31.23■■■□□ 2.59
TSPAN3-207ENST00000559494 INO80Q9ULG1 1556 aaPredicted RBP31.22■■■□□ 2.59
TSPAN3-207ENST00000559494 SIGLEC1Q9BZZ2 1709 aa31.2■■■□□ 2.59
TSPAN3-207ENST00000559494 ABCC5O15440 1437 aa31.19■■■□□ 2.58
TSPAN3-207ENST00000559494 REREQ9P2R6 1566 aa31.14■■■□□ 2.57
TSPAN3-207ENST00000559494 DAPK1P53355 1430 aa31.13■■■□□ 2.57
TSPAN3-207ENST00000559494 DNMT1P26358 1616 aaKnown RBP31.11■■■□□ 2.57
TSPAN3-207ENST00000559494 MAST1Q9Y2H9 1570 aa31.11■■■□□ 2.57
TSPAN3-207ENST00000559494 A2MP01023 1474 aa31.1■■■□□ 2.57
TSPAN3-207ENST00000559494 MLECQ14165 292 aa31.1■■■□□ 2.57
TSPAN3-207ENST00000559494 BCORL1Q5H9F3 1711 aa31.08■■■□□ 2.57
TSPAN3-207ENST00000559494 CHIC2Q9UKJ5 165 aa31.07■■■□□ 2.56
TSPAN3-207ENST00000559494 AGLP35573 1532 aa31.06■■■□□ 2.56
TSPAN3-207ENST00000559494 DHX29Q7Z478 1369 aaKnown RBP31.06■■■□□ 2.56
TSPAN3-207ENST00000559494 RRBP1Q9P2E9 1410 aaKnown RBP31.06■■■□□ 2.56
TSPAN3-207ENST00000559494 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.05■■■□□ 2.56
TSPAN3-207ENST00000559494 SHANK2Q9UPX8 1470 aa31.05■■■□□ 2.56
TSPAN3-207ENST00000559494 ADGBQ8N7X0 1667 aa31.05■■■□□ 2.56
TSPAN3-207ENST00000559494 CROCC2H7BZ55 1655 aa31.04■■■□□ 2.56
TSPAN3-207ENST00000559494 ADAMTSL3P82987 1691 aa31.04■■■□□ 2.56
TSPAN3-207ENST00000559494 PLXNC1O60486 1568 aa31.02■■■□□ 2.56
TSPAN3-207ENST00000559494 RRP7BPQ9NSQ0 103 aa31■■■□□ 2.55
TSPAN3-207ENST00000559494 PTPRKQ15262 1439 aa31■■■□□ 2.55
TSPAN3-207ENST00000559494 ITGAEP38570 1179 aa30.98■■■□□ 2.55
TSPAN3-207ENST00000559494 AEBP2Q6ZN18 517 aaPredicted RBP30.96■■■□□ 2.55
TSPAN3-207ENST00000559494 ANKRD30AQ9BXX3 1397 aa30.95■■■□□ 2.55
TSPAN3-207ENST00000559494 NCOA1Q15788 1441 aa30.95■■■□□ 2.55
TSPAN3-207ENST00000559494 KIF15Q9NS87 1388 aa30.94■■■□□ 2.54
TSPAN3-207ENST00000559494 MADDQ8WXG6 1647 aa30.94■■■□□ 2.54
TSPAN3-207ENST00000559494 KIF3BO15066 747 aa30.94■■■□□ 2.54
TSPAN3-207ENST00000559494 ADGRL2O95490 1459 aa30.92■■■□□ 2.54
TSPAN3-207ENST00000559494 GGT6Q6P531 493 aa30.92■■■□□ 2.54
TSPAN3-207ENST00000559494 DUOX2Q9NRD8 1548 aa30.89■■■□□ 2.54
TSPAN3-207ENST00000559494 PTPRMP28827 1452 aa30.86■■■□□ 2.53
TSPAN3-207ENST00000559494 RIMS1Q86UR5 1692 aaKnown RBP30.85■■■□□ 2.53
TSPAN3-207ENST00000559494 FER1L4A9Z1Z3 1794 aa30.85■■■□□ 2.53
TSPAN3-207ENST00000559494 ROCK1Q13464 1354 aa30.84■■■□□ 2.53
TSPAN3-207ENST00000559494 ESF1Q9H501 851 aaKnown RBP30.82■■■□□ 2.52
TSPAN3-207ENST00000559494 PPP6R1Q9UPN7 881 aa30.82■■■□□ 2.52
TSPAN3-207ENST00000559494 ERBINQ96RT1 1412 aa30.8■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms