RNA–Protein interactions for RNA: ENST00000558163.1

GATM-205, Transcript of glycine amidinotransferase, humanhuman

TSL 4

Gene GATM, Length 569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATM-205ENST00000558163 ABCA9Q8IUA7 1624 aa25.08■■□□□ 1.6
GATM-205ENST00000558163 CDC42BPBQ9Y5S2 1711 aa25.06■■□□□ 1.6
GATM-205ENST00000558163 TCOF1Q13428 1488 aaKnown RBP25.05■■□□□ 1.6
GATM-205ENST00000558163 EFCAB2Q5VUJ9 269 aa25.05■■□□□ 1.6
GATM-205ENST00000558163 PLCH2O75038 1416 aa25.04■■□□□ 1.6
GATM-205ENST00000558163 CAMSAP2Q08AD1 1489 aa25.02■■□□□ 1.6
GATM-205ENST00000558163 FAM69CQ0P6D2 419 aa25.01■■□□□ 1.59
GATM-205ENST00000558163 CD109Q6YHK3 1445 aa25.01■■□□□ 1.59
GATM-205ENST00000558163 ZNF644Q9H582 1327 aaPredicted RBP25■■□□□ 1.59
GATM-205ENST00000558163 ARAP3Q8WWN8 1544 aa24.98■■□□□ 1.59
GATM-205ENST00000558163 GLI2P10070 1586 aa24.97■■□□□ 1.59
GATM-205ENST00000558163 PLEKHH2Q8IVE3 1493 aa24.96■■□□□ 1.59
GATM-205ENST00000558163 DIP2BQ9P265 1576 aa24.95■■□□□ 1.58
GATM-205ENST00000558163 FANCAO15360 1455 aa24.93■■□□□ 1.58
GATM-205ENST00000558163 SAMD9LQ8IVG5 1584 aa24.93■■□□□ 1.58
GATM-205ENST00000558163 CFAP74Q9C0B2 1584 aa24.92■■□□□ 1.58
GATM-205ENST00000558163 HNRNPMP52272 730 aaKnown RBP eCLIP24.91■■□□□ 1.58
GATM-205ENST00000558163 RSPH4AQ5TD94 716 aa24.91■■□□□ 1.58
GATM-205ENST00000558163 DNMT1P26358 1616 aaKnown RBP24.9■■□□□ 1.58
GATM-205ENST00000558163 MAP3K4Q9Y6R4 1608 aa24.9■■□□□ 1.58
GATM-205ENST00000558163 TSPY4P0CV99 314 aa24.89■■□□□ 1.58
GATM-205ENST00000558163 TSPY10P0CW01 314 aa24.89■■□□□ 1.58
GATM-205ENST00000558163 DAPK1P53355 1430 aa24.88■■□□□ 1.57
GATM-205ENST00000558163 CHIC2Q9UKJ5 165 aa24.87■■□□□ 1.57
GATM-205ENST00000558163 KIAA1107Q9UPP5 1409 aa24.86■■□□□ 1.57
GATM-205ENST00000558163 TSPOAP1O95153 1857 aa24.86■■□□□ 1.57
GATM-205ENST00000558163 SYCP2Q9BX26 1530 aa24.86■■□□□ 1.57
GATM-205ENST00000558163 ABCC5O15440 1437 aa24.85■■□□□ 1.57
GATM-205ENST00000558163 ARHGEF5Q12774 1597 aa24.84■■□□□ 1.57
GATM-205ENST00000558163 KIF13AQ9H1H9 1805 aa24.84■■□□□ 1.57
GATM-205ENST00000558163 AKNAQ7Z591 1439 aa24.84■■□□□ 1.57
GATM-205ENST00000558163 ABCC1P33527 1531 aa24.83■■□□□ 1.57
GATM-205ENST00000558163 TRHP20396 242 aaPredicted RBP24.83■■□□□ 1.57
GATM-205ENST00000558163 ADGRL1O94910 1474 aa24.83■■□□□ 1.56
GATM-205ENST00000558163 CCDC141Q6ZP82 1450 aa24.83■■□□□ 1.56
GATM-205ENST00000558163 TEX14Q8IWB6 1497 aa24.81■■□□□ 1.56
GATM-205ENST00000558163 NEO1Q92859 1461 aa24.81■■□□□ 1.56
GATM-205ENST00000558163 CROCC2H7BZ55 1655 aa24.81■■□□□ 1.56
GATM-205ENST00000558163 PTPRKQ15262 1439 aa24.8■■□□□ 1.56
GATM-205ENST00000558163 MBD5Q9P267 1494 aa24.79■■□□□ 1.56
GATM-205ENST00000558163 SCAPERQ9BY12 1400 aa24.78■■□□□ 1.56
GATM-205ENST00000558163 RRP7BPQ9NSQ0 103 aa24.77■■□□□ 1.56
GATM-205ENST00000558163 MYT1LQ9UL68 1186 aa24.77■■□□□ 1.56
GATM-205ENST00000558163 ADGBQ8N7X0 1667 aa24.76■■□□□ 1.55
GATM-205ENST00000558163 ANKRD30AQ9BXX3 1397 aa24.76■■□□□ 1.55
GATM-205ENST00000558163 C9orf84Q5VXU9 1444 aa24.76■■□□□ 1.55
GATM-205ENST00000558163 SETD5Q9C0A6 1442 aa24.76■■□□□ 1.55
GATM-205ENST00000558163 SHANK2Q9UPX8 1470 aa24.76■■□□□ 1.55
GATM-205ENST00000558163 ROCK1Q13464 1354 aa24.75■■□□□ 1.55
GATM-205ENST00000558163 ARHGEF12Q9NZN5 1544 aa24.74■■□□□ 1.55
GATM-205ENST00000558163 TRAPPC8Q9Y2L5 1435 aa24.72■■□□□ 1.55
GATM-205ENST00000558163 SPAG9O60271 1321 aaKnown RBP24.71■■□□□ 1.55
GATM-205ENST00000558163 AFAP1Q8N556 730 aa24.71■■□□□ 1.55
GATM-205ENST00000558163 HFM1A2PYH4 1435 aa24.69■■□□□ 1.54
GATM-205ENST00000558163 PPRC1Q5VV67 1664 aaKnown RBP24.69■■□□□ 1.54
GATM-205ENST00000558163 DENND4BO75064 1496 aaPredicted RBP24.69■■□□□ 1.54
GATM-205ENST00000558163 ADGRL2O95490 1459 aa24.68■■□□□ 1.54
GATM-205ENST00000558163 ZNF518AQ6AHZ1 1483 aa24.68■■□□□ 1.54
GATM-205ENST00000558163 RAB3GAP2Q9H2M9 1393 aa24.67■■□□□ 1.54
GATM-205ENST00000558163 MAST1Q9Y2H9 1570 aa24.67■■□□□ 1.54
GATM-205ENST00000558163 GCC2Q8IWJ2 1684 aa24.66■■□□□ 1.54
GATM-205ENST00000558163 NAIPQ13075 1403 aa24.66■■□□□ 1.54
GATM-205ENST00000558163 NCOA1Q15788 1441 aa24.66■■□□□ 1.54
GATM-205ENST00000558163 POGZQ7Z3K3 1410 aa24.64■■□□□ 1.54
GATM-205ENST00000558163 HRCP23327 699 aa24.62■■□□□ 1.53
GATM-205ENST00000558163 KIF15Q9NS87 1388 aa24.62■■□□□ 1.53
GATM-205ENST00000558163 RTEL1-TNFRSF6BF6WH68 1400 aa24.61■■□□□ 1.53
GATM-205ENST00000558163 ACIN1Q9UKV3 1341 aaKnown RBP24.61■■□□□ 1.53
GATM-205ENST00000558163 RAPGEF3O95398 923 aa24.6■■□□□ 1.53
GATM-205ENST00000558163 CCER1Q8TC90 406 aaPredicted RBP24.59■■□□□ 1.53
GATM-205ENST00000558163 PLXNC1O60486 1568 aa24.59■■□□□ 1.53
GATM-205ENST00000558163 ATP7AQ04656 1500 aa24.58■■□□□ 1.53
GATM-205ENST00000558163 ZFYVE16Q7Z3T8 1539 aa24.56■■□□□ 1.52
GATM-205ENST00000558163 TRIM52Q96A61 297 aa24.56■■□□□ 1.52
GATM-205ENST00000558163 RICTORQ6R327 1708 aa24.55■■□□□ 1.52
GATM-205ENST00000558163 ANKRD50Q9ULJ7 1429 aa24.55■■□□□ 1.52
GATM-205ENST00000558163 KDM5CP41229 1560 aa24.54■■□□□ 1.52
GATM-205ENST00000558163 HECW2Q9P2P5 1572 aa24.54■■□□□ 1.52
GATM-205ENST00000558163 INO80Q9ULG1 1556 aaPredicted RBP24.54■■□□□ 1.52
GATM-205ENST00000558163 DUOX2Q9NRD8 1548 aa24.53■■□□□ 1.52
GATM-205ENST00000558163 MLH3Q9UHC1 1453 aa24.52■■□□□ 1.52
GATM-205ENST00000558163 KIDINS220Q9ULH0 1771 aa24.5■■□□□ 1.51
GATM-205ENST00000558163 KDM6BO15054 1643 aa24.48■■□□□ 1.51
GATM-205ENST00000558163 FRMPD1Q5SYB0 1578 aa24.46■■□□□ 1.51
GATM-205ENST00000558163 ERBINQ96RT1 1412 aa24.45■■□□□ 1.51
GATM-205ENST00000558163 ZMYM4Q5VZL5 1548 aa24.45■■□□□ 1.5
GATM-205ENST00000558163 MAGI2Q86UL8 1455 aa24.45■■□□□ 1.5
GATM-205ENST00000558163 DHX29Q7Z478 1369 aaKnown RBP24.42■■□□□ 1.5
GATM-205ENST00000558163 A2MP01023 1474 aa24.42■■□□□ 1.5
GATM-205ENST00000558163 DHX57Q6P158 1386 aaKnown RBP24.41■■□□□ 1.5
GATM-205ENST00000558163 COL17A1Q9UMD9 1497 aaPredicted RBP24.4■■□□□ 1.5
GATM-205ENST00000558163 ABCA6Q8N139 1617 aa24.4■■□□□ 1.5
GATM-205ENST00000558163 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.39■■□□□ 1.492e-8■□□□□ 10.9
GATM-205ENST00000558163 KIF3BO15066 747 aa24.38■■□□□ 1.49
GATM-205ENST00000558163 NUP155O75694 1391 aa24.38■■□□□ 1.49
GATM-205ENST00000558163 DIP2CQ9Y2E4 1556 aa24.37■■□□□ 1.49
GATM-205ENST00000558163 YEATS2Q9ULM3 1422 aa24.35■■□□□ 1.49
GATM-205ENST00000558163 SLC4A1APQ9BWU0 796 aaKnown RBP24.35■■□□□ 1.49
GATM-205ENST00000558163 EIF2AK4Q9P2K8 1649 aaKnown RBP24.35■■□□□ 1.49
GATM-205ENST00000558163 ATP10AO60312 1499 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms