RNA–Protein interactions for RNA: ENST00000558163.1

GATM-205, Transcript of glycine amidinotransferase, humanhuman

TSL 4

Gene GATM, Length 569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATM-205ENST00000558163 NISCHQ9Y2I1 1504 aa38.35■■■■□ 3.73
GATM-205ENST00000558163 CCDC180Q9P1Z9 1646 aa33.71■■■□□ 2.99
GATM-205ENST00000558163 ABCC9O60706 1549 aa32.26■■■□□ 2.76
GATM-205ENST00000558163 ZCCHC6Q5VYS8 1495 aaKnown RBP32.1■■■□□ 2.73
GATM-205ENST00000558163 DCAF8L2P0C7V8 631 aa31.98■■■□□ 2.71
GATM-205ENST00000558163 DCAF1Q9Y4B6 1507 aa31.71■■■□□ 2.67
GATM-205ENST00000558163 NACADO15069 1562 aa31.52■■■□□ 2.64
GATM-205ENST00000558163 MYO15BQ96JP2 1530 aa31.51■■■□□ 2.63
GATM-205ENST00000558163 RB1CC1Q8TDY2 1594 aa31.39■■■□□ 2.61
GATM-205ENST00000558163 SHROOM4Q9ULL8 1493 aa31■■■□□ 2.55
GATM-205ENST00000558163 SCRIBQ14160 1630 aa30.91■■■□□ 2.54
GATM-205ENST00000558163 UNC13AQ9UPW8 1703 aa30.64■■■□□ 2.5
GATM-205ENST00000558163 PABPN1Q86U42 306 aaKnown RBP eCLIP30.33■■■□□ 2.45
GATM-205ENST00000558163 BICRAQ9NZM4 1560 aa30.29■■■□□ 2.44
GATM-205ENST00000558163 CECR2Q9BXF3 1484 aa29.77■■■□□ 2.36
GATM-205ENST00000558163 BAZ1AQ9NRL2 1556 aaPredicted RBP29.7■■■□□ 2.35
GATM-205ENST00000558163 SUPT5HO00267 1087 aaKnown RBP29.65■■■□□ 2.34
GATM-205ENST00000558163 SMARCA4P51532 1647 aa29.59■■■□□ 2.33
GATM-205ENST00000558163 MROH2BQ7Z745 1585 aa29.57■■■□□ 2.32
GATM-205ENST00000558163 RSF1Q96T23 1441 aaPredicted RBP29.54■■■□□ 2.32
GATM-205ENST00000558163 EIF4G1Q04637 1599 aaKnown RBP29.48■■■□□ 2.31
GATM-205ENST00000558163 WIZO95785 1651 aa29.34■■■□□ 2.29
GATM-205ENST00000558163 SMARCA2P51531 1590 aa29.26■■■□□ 2.27
GATM-205ENST00000558163 ATAD2BQ9ULI0 1458 aa29.2■■■□□ 2.26
GATM-205ENST00000558163 PEG3Q9GZU2 1588 aa29.2■■■□□ 2.26
GATM-205ENST00000558163 CC2D2AQ9P2K1 1620 aa29.18■■■□□ 2.26
GATM-205ENST00000558163 BAZ1BQ9UIG0 1483 aaKnown RBP29.08■■■□□ 2.25
GATM-205ENST00000558163 TOP2AP11388 1531 aaKnown RBP29.05■■■□□ 2.24
GATM-205ENST00000558163 NCAPD3P42695 1498 aa29.04■■■□□ 2.24
GATM-205ENST00000558163 HMGXB3Q12766 1538 aa28.98■■■□□ 2.23
GATM-205ENST00000558163 DNAJC5BQ9UF47 199 aa28.75■■■□□ 2.19
GATM-205ENST00000558163 CCDC88BA6NC98 1476 aa28.72■■■□□ 2.19
GATM-205ENST00000558163 CADPSQ9ULU8 1353 aa28.29■■■□□ 2.12
GATM-205ENST00000558163 CFTRP13569 1480 aa28.26■■■□□ 2.11
GATM-205ENST00000558163 LAMC3Q9Y6N6 1575 aa28.18■■■□□ 2.1
GATM-205ENST00000558163 PRDM2Q13029 1718 aa28.18■■■□□ 2.1
GATM-205ENST00000558163 NESP48681 1621 aa28.12■■■□□ 2.09
GATM-205ENST00000558163 CHIC1Q5VXU3 224 aa28.07■■■□□ 2.08
GATM-205ENST00000558163 PDS5BQ9NTI5 1447 aa28.02■■■□□ 2.08
GATM-205ENST00000558163 FANCD2Q9BXW9 1451 aa27.98■■■□□ 2.07
GATM-205ENST00000558163 TRIM41Q8WV44 630 aa27.96■■■□□ 2.07
GATM-205ENST00000558163 ABCC8Q09428 1581 aa27.95■■■□□ 2.07
GATM-205ENST00000558163 WRNQ14191 1432 aaPredicted RBP eCLIP27.89■■■□□ 2.06
GATM-205ENST00000558163 CEP164Q9UPV0 1460 aa27.89■■■□□ 2.05
GATM-205ENST00000558163 KIF21AQ7Z4S6 1674 aa27.84■■■□□ 2.05
GATM-205ENST00000558163 ERCC6Q03468 1493 aa27.82■■■□□ 2.04
GATM-205ENST00000558163 SYNJ1O43426 1573 aa27.73■■■□□ 2.03
GATM-205ENST00000558163 CUX1P39880 1505 aa27.7■■■□□ 2.02
GATM-205ENST00000558163 TOP2BQ02880 1626 aa27.69■■■□□ 2.02
GATM-205ENST00000558163 BIVM-ERCC5R4GMW8 1640 aa27.67■■■□□ 2.02
GATM-205ENST00000558163 DNMBPQ6XZF7 1577 aa27.65■■■□□ 2.02
GATM-205ENST00000558163 MRC2Q9UBG0 1479 aa27.64■■■□□ 2.02
GATM-205ENST00000558163 TOPBP1Q92547 1522 aa27.61■■■□□ 2.01
GATM-205ENST00000558163 URB2Q14146 1524 aaKnown RBP27.6■■■□□ 2.01
GATM-205ENST00000558163 FGD5Q6ZNL6 1462 aa27.51■■□□□ 1.99
GATM-205ENST00000558163 WDR62O43379 1518 aa27.46■■□□□ 1.99
GATM-205ENST00000558163 THOC2Q8NI27 1593 aaKnown RBP27.46■■□□□ 1.99
GATM-205ENST00000558163 POLA1P09884 1462 aaPredicted RBP27.42■■□□□ 1.98
GATM-205ENST00000558163 FAM9AQ8IZU1 332 aaPredicted RBP27.4■■□□□ 1.98
GATM-205ENST00000558163 SOGA1O94964 1423 aa27.39■■□□□ 1.97
GATM-205ENST00000558163 RAD54L2Q9Y4B4 1467 aa27.32■■□□□ 1.96
GATM-205ENST00000558163 EEA1Q15075 1411 aa27.32■■□□□ 1.96
GATM-205ENST00000558163 CUX2O14529 1486 aa27.28■■□□□ 1.96
GATM-205ENST00000558163 KIF27Q86VH2 1401 aa27.28■■□□□ 1.96
GATM-205ENST00000558163 ABCA10Q8WWZ4 1543 aa27.25■■□□□ 1.95
GATM-205ENST00000558163 IFT140Q96RY7 1462 aa27.24■■□□□ 1.95
GATM-205ENST00000558163 RUSC2Q8N2Y8 1516 aa27.22■■□□□ 1.95
GATM-205ENST00000558163 TARBP1Q13395 1621 aaKnown RBP27.19■■□□□ 1.94
GATM-205ENST00000558163 CSRNP3Q8WYN3 585 aa27.19■■□□□ 1.94
GATM-205ENST00000558163 WDR97A6NE52 1622 aa27.17■■□□□ 1.94
GATM-205ENST00000558163 TDRD9Q8NDG6 1382 aaKnown RBP27.12■■□□□ 1.93
GATM-205ENST00000558163 GAPVD1Q14C86 1478 aa27.08■■□□□ 1.93
GATM-205ENST00000558163 ABCA5Q8WWZ7 1642 aa27.04■■□□□ 1.92
GATM-205ENST00000558163 EHMT2Q96KQ7 1210 aa27.03■■□□□ 1.92
GATM-205ENST00000558163 ZNF608Q9ULD9 1512 aaPredicted RBP27.01■■□□□ 1.91
GATM-205ENST00000558163 AQRO60306 1485 aaKnown RBP eCLIP27.01■■□□□ 1.918e-6■■■■□ 23.2
GATM-205ENST00000558163 IGF1RP08069 1367 aa26.99■■□□□ 1.91
GATM-205ENST00000558163 LOC105371045A0A1W2PR82 267 aa26.97■■□□□ 1.91
GATM-205ENST00000558163 PBRM1Q86U86 1689 aa26.96■■□□□ 1.91
GATM-205ENST00000558163 EIF4G3O43432 1585 aaKnown RBP26.96■■□□□ 1.91
GATM-205ENST00000558163 ERICH3Q5RHP9 1530 aa26.95■■□□□ 1.91
GATM-205ENST00000558163 GRIN2BQ13224 1484 aa26.94■■□□□ 1.9
GATM-205ENST00000558163 KIF21BO75037 1637 aa26.92■■□□□ 1.9
GATM-205ENST00000558163 CARMIL1Q5VZK9 1371 aa26.92■■□□□ 1.9
GATM-205ENST00000558163 CUL7Q14999 1698 aa26.91■■□□□ 1.9
GATM-205ENST00000558163 GOLGA3Q08378 1498 aa26.89■■□□□ 1.9
GATM-205ENST00000558163 UBTFP17480 764 aaKnown RBP26.88■■□□□ 1.89
GATM-205ENST00000558163 PRXQ9BXM0 1461 aa26.87■■□□□ 1.89
GATM-205ENST00000558163 RAPGEF2Q9Y4G8 1499 aa26.83■■□□□ 1.89
GATM-205ENST00000558163 SNAPC4Q5SXM2 1469 aa26.79■■□□□ 1.88
GATM-205ENST00000558163 FHAD1B1AJZ9 1412 aa26.78■■□□□ 1.88
GATM-205ENST00000558163 MAGI1Q96QZ7 1491 aaPredicted RBP26.76■■□□□ 1.87
GATM-205ENST00000558163 ADAMTS12P58397 1594 aa26.75■■□□□ 1.87
GATM-205ENST00000558163 CHMP7Q8WUX9 453 aaPredicted RBP26.7■■□□□ 1.86
GATM-205ENST00000558163 FBLN2P98095 1184 aa26.69■■□□□ 1.86
GATM-205ENST00000558163 TNIKQ9UKE5 1360 aa26.69■■□□□ 1.86
GATM-205ENST00000558163 SYNJ2O15056 1496 aa26.65■■□□□ 1.86
GATM-205ENST00000558163 GRIN2AQ12879 1464 aa26.58■■□□□ 1.85
GATM-205ENST00000558163 RANGAP1P46060 587 aaPredicted RBP26.55■■□□□ 1.84
GATM-205ENST00000558163 CTTNBP2Q8WZ74 1663 aa26.54■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms