RNA–Protein interactions for RNA: ENST00000557258.5

FOXN3-214, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-214ENST00000557258 ABCC5O15440 1437 aa27.42■■□□□ 1.98
FOXN3-214ENST00000557258 CARMIL2Q6F5E8 1435 aa27.4■■□□□ 1.98
FOXN3-214ENST00000557258 NUP160Q12769 1436 aa27.4■■□□□ 1.98
FOXN3-214ENST00000557258 GCC2Q8IWJ2 1684 aa27.38■■□□□ 1.97
FOXN3-214ENST00000557258 KIF14Q15058 1648 aa27.38■■□□□ 1.97
FOXN3-214ENST00000557258 TROQ12816 1431 aaPredicted RBP27.37■■□□□ 1.97
FOXN3-214ENST00000557258 SLC4A1APQ9BWU0 796 aaKnown RBP27.32■■□□□ 1.96
FOXN3-214ENST00000557258 KDM5BQ9UGL1 1544 aa27.31■■□□□ 1.96
FOXN3-214ENST00000557258 CAMSAP2Q08AD1 1489 aa27.3■■□□□ 1.96
FOXN3-214ENST00000557258 L3MBTL2Q969R5 705 aa27.3■■□□□ 1.96
FOXN3-214ENST00000557258 PLEKHD1A6NEE1 506 aa27.3■■□□□ 1.96
FOXN3-214ENST00000557258 GPATCH8Q9UKJ3 1502 aaKnown RBP27.29■■□□□ 1.96
FOXN3-214ENST00000557258 AKNAQ7Z591 1439 aa27.29■■□□□ 1.96
FOXN3-214ENST00000557258 DNMT1P26358 1616 aaKnown RBP27.28■■□□□ 1.96
FOXN3-214ENST00000557258 ATP10BO94823 1461 aa27.23■■□□□ 1.95
FOXN3-214ENST00000557258 HSPA5P11021 654 aaKnown RBP27.23■■□□□ 1.95
FOXN3-214ENST00000557258 ROCK1Q13464 1354 aa27.23■■□□□ 1.95
FOXN3-214ENST00000557258 ANP32CO43423 234 aa27.2■■□□□ 1.94
FOXN3-214ENST00000557258 PTPRGP23470 1445 aa27.18■■□□□ 1.94
FOXN3-214ENST00000557258 NCOA1Q15788 1441 aa27.17■■□□□ 1.94
FOXN3-214ENST00000557258 HNRNPMP52272 730 aaKnown RBP eCLIP27.16■■□□□ 1.947e-7■■■■□ 20.3
FOXN3-214ENST00000557258 ANKRD30BQ9BXX2 1392 aa27.16■■□□□ 1.94
FOXN3-214ENST00000557258 ABCA8O94911 1581 aa27.15■■□□□ 1.94
FOXN3-214ENST00000557258 NBPF8Q3BBV2 869 aa27.15■■□□□ 1.94
FOXN3-214ENST00000557258 ZNF326Q5BKZ1 582 aaKnown RBP27.14■■□□□ 1.94
FOXN3-214ENST00000557258 WASHC2AQ641Q2 1341 aa27.12■■□□□ 1.93
FOXN3-214ENST00000557258 ITSN2Q9NZM3 1697 aa27.11■■□□□ 1.93
FOXN3-214ENST00000557258 EIF4G2P78344 907 aaKnown RBP eCLIP27.09■■□□□ 1.93
FOXN3-214ENST00000557258 PKD2Q13563 968 aa27.09■■□□□ 1.93
FOXN3-214ENST00000557258 CHD1O14646 1710 aa27.08■■□□□ 1.93
FOXN3-214ENST00000557258 PZPP20742 1482 aa27.07■■□□□ 1.92
FOXN3-214ENST00000557258 C11orf95C9JLR9 678 aaPredicted RBP27.07■■□□□ 1.92
FOXN3-214ENST00000557258 ADCY10Q96PN6 1610 aa27.06■■□□□ 1.92
FOXN3-214ENST00000557258 ANKRD30AQ9BXX3 1397 aa27.06■■□□□ 1.92
FOXN3-214ENST00000557258 CDC42BPAQ5VT25 1732 aa27.05■■□□□ 1.92
FOXN3-214ENST00000557258 ABCC10Q5T3U5 1492 aa27.05■■□□□ 1.92
FOXN3-214ENST00000557258 RPRD2Q5VT52 1461 aaKnown RBP27.05■■□□□ 1.92
FOXN3-214ENST00000557258 PELP1Q8IZL8 1130 aaKnown RBP27.05■■□□□ 1.92
FOXN3-214ENST00000557258 ERCC6L2Q5T890 1561 aa27.04■■□□□ 1.92
FOXN3-214ENST00000557258 SUPT16HQ9Y5B9 1047 aaKnown RBP27.03■■□□□ 1.92
FOXN3-214ENST00000557258 TSPY4P0CV99 314 aa27.03■■□□□ 1.92
FOXN3-214ENST00000557258 TSPY10P0CW01 314 aa27.03■■□□□ 1.92
FOXN3-214ENST00000557258 ANKRD50Q9ULJ7 1429 aa27.03■■□□□ 1.92
FOXN3-214ENST00000557258 C9orf84Q5VXU9 1444 aa27.01■■□□□ 1.91
FOXN3-214ENST00000557258 CNGB1Q14028 1251 aaPredicted RBP27.01■■□□□ 1.91
FOXN3-214ENST00000557258 TEX14Q8IWB6 1497 aa27■■□□□ 1.91
FOXN3-214ENST00000557258 NUP155O75694 1391 aa27■■□□□ 1.91
FOXN3-214ENST00000557258 ADGBQ8N7X0 1667 aa26.96■■□□□ 1.91
FOXN3-214ENST00000557258 CROCC2H7BZ55 1655 aa26.96■■□□□ 1.91
FOXN3-214ENST00000557258 POLR3GLQ9BT43 218 aa26.95■■□□□ 1.9
FOXN3-214ENST00000557258 ADGRL2O95490 1459 aa26.95■■□□□ 1.9
FOXN3-214ENST00000557258 CCER2I3L3R5 266 aa26.94■■□□□ 1.9
FOXN3-214ENST00000557258 BCANQ96GW7 911 aa26.94■■□□□ 1.9
FOXN3-214ENST00000557258 KIF15Q9NS87 1388 aa26.93■■□□□ 1.9
FOXN3-214ENST00000557258 KIAA1107Q9UPP5 1409 aa26.92■■□□□ 1.9
FOXN3-214ENST00000557258 KDM2AQ9Y2K7 1162 aa26.9■■□□□ 1.9
FOXN3-214ENST00000557258 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.88■■□□□ 1.891e-6■□□□□ 10.2
FOXN3-214ENST00000557258 CCDC184Q52MB2 194 aa26.88■■□□□ 1.89
FOXN3-214ENST00000557258 MBD5Q9P267 1494 aa26.85■■□□□ 1.89
FOXN3-214ENST00000557258 CCDC7Q96M83 1385 aa26.85■■□□□ 1.89
FOXN3-214ENST00000557258 SAMD9LQ8IVG5 1584 aa26.84■■□□□ 1.89
FOXN3-214ENST00000557258 TTC37Q6PGP7 1564 aa26.83■■□□□ 1.89
FOXN3-214ENST00000557258 KIF7Q2M1P5 1343 aa26.82■■□□□ 1.88
FOXN3-214ENST00000557258 CDC42BPBQ9Y5S2 1711 aa26.82■■□□□ 1.88
FOXN3-214ENST00000557258 ARHGAP5Q13017 1502 aa26.82■■□□□ 1.88
FOXN3-214ENST00000557258 SYCP2Q9BX26 1530 aa26.81■■□□□ 1.88
FOXN3-214ENST00000557258 HNRNPUQ00839 825 aaKnown RBP eCLIP26.81■■□□□ 1.88
FOXN3-214ENST00000557258 FKBP8Q14318 412 aa26.8■■□□□ 1.88
FOXN3-214ENST00000557258 SHANK2Q9UPX8 1470 aa26.79■■□□□ 1.88
FOXN3-214ENST00000557258 CNTLNQ9NXG0 1405 aa26.78■■□□□ 1.88
FOXN3-214ENST00000557258 CCDC141Q6ZP82 1450 aa26.78■■□□□ 1.88
FOXN3-214ENST00000557258 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.77■■□□□ 1.88
FOXN3-214ENST00000557258 DCAF11Q8TEB1 546 aa26.76■■□□□ 1.87
FOXN3-214ENST00000557258 SHROOM2Q13796 1616 aa26.76■■□□□ 1.87
FOXN3-214ENST00000557258 SPATA31E1Q6ZUB1 1445 aa26.75■■□□□ 1.87
FOXN3-214ENST00000557258 PREX2Q70Z35 1606 aa26.75■■□□□ 1.87
FOXN3-214ENST00000557258 RGL3Q3MIN7 710 aa26.74■■□□□ 1.87
FOXN3-214ENST00000557258 USP47Q96K76 1375 aa26.73■■□□□ 1.87
FOXN3-214ENST00000557258 ABCC2Q92887 1545 aa26.73■■□□□ 1.87
FOXN3-214ENST00000557258 FAM9BQ8IZU0 186 aa26.73■■□□□ 1.87
FOXN3-214ENST00000557258 PRKRIP1Q9H875 184 aaPredicted RBP26.71■■□□□ 1.87
FOXN3-214ENST00000557258 ARHGEF5Q12774 1597 aa26.69■■□□□ 1.86
FOXN3-214ENST00000557258 CARD11Q9BXL7 1154 aa26.69■■□□□ 1.86
FOXN3-214ENST00000557258 SENP3-EIF4A1A0A087X0R7 540 aa26.67■■□□□ 1.86
FOXN3-214ENST00000557258 MRS2Q9HD23 443 aa26.66■■□□□ 1.86
FOXN3-214ENST00000557258 ARHGEF12Q9NZN5 1544 aa26.65■■□□□ 1.86
FOXN3-214ENST00000557258 FAM135AQ9P2D6 1515 aa26.64■■□□□ 1.86
FOXN3-214ENST00000557258 PLEKHH2Q8IVE3 1493 aa26.63■■□□□ 1.85
FOXN3-214ENST00000557258 IRX6P78412 446 aaPredicted RBP26.61■■□□□ 1.85
FOXN3-214ENST00000557258 RSPH4AQ5TD94 716 aa26.61■■□□□ 1.85
FOXN3-214ENST00000557258 BCORL1Q5H9F3 1711 aa26.6■■□□□ 1.85
FOXN3-214ENST00000557258 ST20-MTHFSA0A0A6YYL1 179 aa26.6■■□□□ 1.85
FOXN3-214ENST00000557258 ZCCHC11Q5TAX3 1644 aaKnown RBP26.59■■□□□ 1.85
FOXN3-214ENST00000557258 AFAP1Q8N556 730 aa26.59■■□□□ 1.85
FOXN3-214ENST00000557258 NEFLP07196 543 aa26.58■■□□□ 1.85
FOXN3-214ENST00000557258 CLASP1Q7Z460 1538 aa26.58■■□□□ 1.84
FOXN3-214ENST00000557258 MYO5CQ9NQX4 1742 aa26.57■■□□□ 1.84
FOXN3-214ENST00000557258 KDM5DQ9BY66 1539 aa26.57■■□□□ 1.84
FOXN3-214ENST00000557258 EFCAB2Q5VUJ9 269 aa26.56■■□□□ 1.84
FOXN3-214ENST00000557258 CCDC144AA2RUR9 1427 aa26.55■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms