RNA–Protein interactions for RNA: ENST00000556830.1

LRP1-212, Transcript of LDL receptor related protein 1, humanhuman

TSL 2

Gene LRP1, Length 1,847 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-212ENST00000556830 HFM1A2PYH4 1435 aa17.42■□□□□ 0.38
LRP1-212ENST00000556830 ANP32AP39687 249 aaKnown RBP17.42■□□□□ 0.38
LRP1-212ENST00000556830 IRX6P78412 446 aaPredicted RBP17.42■□□□□ 0.38
LRP1-212ENST00000556830 CCDC18Q5T9S5 1454 aa17.42■□□□□ 0.38
LRP1-212ENST00000556830 CNTLNQ9NXG0 1405 aa17.42■□□□□ 0.38
LRP1-212ENST00000556830 IPO9Q96P70 1041 aaKnown RBP17.41■□□□□ 0.38
LRP1-212ENST00000556830 MTUS2Q5JR59 1369 aa17.41■□□□□ 0.38
LRP1-212ENST00000556830 RAPGEF6Q8TEU7 1601 aa17.4■□□□□ 0.38
LRP1-212ENST00000556830 HIRIP3Q9BW71 556 aaPredicted RBP17.4■□□□□ 0.38
LRP1-212ENST00000556830 EPRSP07814 1512 aaKnown RBP17.4■□□□□ 0.38
LRP1-212ENST00000556830 KDM5BQ9UGL1 1544 aa17.39■□□□□ 0.37
LRP1-212ENST00000556830 USP35Q9P2H5 1018 aa17.36■□□□□ 0.37
LRP1-212ENST00000556830 PTPN23Q9H3S7 1636 aa17.35■□□□□ 0.37
LRP1-212ENST00000556830 SMG6Q86US8 1419 aaKnown RBP17.35■□□□□ 0.37
LRP1-212ENST00000556830 B4GALNT3Q6L9W6 998 aa17.34■□□□□ 0.37
LRP1-212ENST00000556830 FGD6Q6ZV73 1430 aa17.34■□□□□ 0.37
LRP1-212ENST00000556830 ZBTB47Q9UFB7 747 aaPredicted RBP17.34■□□□□ 0.37
LRP1-212ENST00000556830 WASHC2AQ641Q2 1341 aa17.34■□□□□ 0.37
LRP1-212ENST00000556830 ARHGEF11O15085 1522 aa17.34■□□□□ 0.37
LRP1-212ENST00000556830 ARID3CA6NKF2 412 aa17.33■□□□□ 0.37
LRP1-212ENST00000556830 NUP153P49790 1475 aaKnown RBP17.33■□□□□ 0.37
LRP1-212ENST00000556830 NBR1Q14596 966 aa17.33■□□□□ 0.36
LRP1-212ENST00000556830 RNF123Q5XPI4 1314 aa17.32■□□□□ 0.36
LRP1-212ENST00000556830 PAK3O75914 559 aaPredicted RBP17.32■□□□□ 0.36
LRP1-212ENST00000556830 DNAJC5Q9H3Z4 198 aa17.31■□□□□ 0.36
LRP1-212ENST00000556830 EIF4G2P78344 907 aaKnown RBP eCLIP17.3■□□□□ 0.36
LRP1-212ENST00000556830 MYOM3Q5VTT5 1437 aa17.3■□□□□ 0.36
LRP1-212ENST00000556830 PRKRIP1Q9H875 184 aaPredicted RBP17.29■□□□□ 0.36
LRP1-212ENST00000556830 NCOA1Q15788 1441 aa17.29■□□□□ 0.36
LRP1-212ENST00000556830 ANO8Q9HCE9 1232 aaPredicted RBP17.28■□□□□ 0.36
LRP1-212ENST00000556830 PLB1Q6P1J6 1458 aa17.28■□□□□ 0.36
LRP1-212ENST00000556830 HSPA5P11021 654 aaKnown RBP17.28■□□□□ 0.36
LRP1-212ENST00000556830 C11orf95C9JLR9 678 aaPredicted RBP17.27■□□□□ 0.36
LRP1-212ENST00000556830 CARMIL2Q6F5E8 1435 aa17.27■□□□□ 0.35
LRP1-212ENST00000556830 NAIPQ13075 1403 aa17.26■□□□□ 0.35
LRP1-212ENST00000556830 JPH4Q96JJ6 628 aa17.26■□□□□ 0.35
LRP1-212ENST00000556830 SHROOM2Q13796 1616 aa17.25■□□□□ 0.35
LRP1-212ENST00000556830 CCDC7Q96M83 1385 aa17.24■□□□□ 0.35
LRP1-212ENST00000556830 MRS2Q9HD23 443 aa17.24■□□□□ 0.35
LRP1-212ENST00000556830 ABCA8O94911 1581 aa17.23■□□□□ 0.35
LRP1-212ENST00000556830 POLR1AO95602 1720 aaPredicted RBP17.23■□□□□ 0.35
LRP1-212ENST00000556830 AKNAQ7Z591 1439 aa17.23■□□□□ 0.35
LRP1-212ENST00000556830 CCDC136Q96JN2 1154 aa17.22■□□□□ 0.35
LRP1-212ENST00000556830 NUDCQ9Y266 331 aa17.21■□□□□ 0.35
LRP1-212ENST00000556830 WASHC2CQ9Y4E1 1318 aa17.2■□□□□ 0.34
LRP1-212ENST00000556830 PTPRKQ15262 1439 aa17.2■□□□□ 0.34
LRP1-212ENST00000556830 PRG4Q92954 1404 aaPredicted RBP17.2■□□□□ 0.34
LRP1-212ENST00000556830 KIF14Q15058 1648 aa17.2■□□□□ 0.34
LRP1-212ENST00000556830 PPM1GO15355 546 aaPredicted RBP17.19■□□□□ 0.34
LRP1-212ENST00000556830 OSCARQ8IYS5 282 aa17.19■□□□□ 0.34
LRP1-212ENST00000556830 ADCY10Q96PN6 1610 aa17.19■□□□□ 0.34
LRP1-212ENST00000556830 TCOF1Q13428 1488 aaKnown RBP17.19■□□□□ 0.34
LRP1-212ENST00000556830 SALL2Q9Y467 1007 aaPredicted RBP17.19■□□□□ 0.34
LRP1-212ENST00000556830 ERCC6L2Q5T890 1561 aa17.18■□□□□ 0.34
LRP1-212ENST00000556830 FAM9BQ8IZU0 186 aa17.18■□□□□ 0.34
LRP1-212ENST00000556830 GCC2Q8IWJ2 1684 aa17.18■□□□□ 0.34
LRP1-212ENST00000556830 TCERG1O14776 1098 aaKnown RBP17.16■□□□□ 0.34
LRP1-212ENST00000556830 CCDC184Q52MB2 194 aa17.16■□□□□ 0.34
LRP1-212ENST00000556830 UBE2Q2Q8WVN8 375 aa17.16■□□□□ 0.34
LRP1-212ENST00000556830 ITSN2Q9NZM3 1697 aa17.15■□□□□ 0.34
LRP1-212ENST00000556830 CLASP1Q7Z460 1538 aa17.14■□□□□ 0.33
LRP1-212ENST00000556830 MS4A1P11836 297 aa17.14■□□□□ 0.33
LRP1-212ENST00000556830 TROQ12816 1431 aaPredicted RBP17.13■□□□□ 0.33
LRP1-212ENST00000556830 MIA2Q96PC5 1412 aa17.11■□□□□ 0.33
LRP1-212ENST00000556830 CDC42BPAQ5VT25 1732 aa17.1■□□□□ 0.33
LRP1-212ENST00000556830 IL27Q8NEV9 243 aa17.1■□□□□ 0.33
LRP1-212ENST00000556830 SPATA31E1Q6ZUB1 1445 aa17.1■□□□□ 0.33
LRP1-212ENST00000556830 ARID4BQ4LE39 1312 aaPredicted RBP17.09■□□□□ 0.33
LRP1-212ENST00000556830 DNMT1P26358 1616 aaKnown RBP17.09■□□□□ 0.33
LRP1-212ENST00000556830 ATP10BO94823 1461 aa17.08■□□□□ 0.33
LRP1-212ENST00000556830 PTPRGP23470 1445 aa17.08■□□□□ 0.32
LRP1-212ENST00000556830 NEFMP07197 916 aa17.07■□□□□ 0.32
LRP1-212ENST00000556830 DDRGK1Q96HY6 314 aa17.07■□□□□ 0.32
LRP1-212ENST00000556830 DENND4BO75064 1496 aaPredicted RBP17.07■□□□□ 0.32
LRP1-212ENST00000556830 KDM6BO15054 1643 aa17.06■□□□□ 0.32
LRP1-212ENST00000556830 CROCC2H7BZ55 1655 aa17.04■□□□□ 0.32
LRP1-212ENST00000556830 RPRD2Q5VT52 1461 aaKnown RBP17.04■□□□□ 0.32
LRP1-212ENST00000556830 KIF7Q2M1P5 1343 aa17.04■□□□□ 0.32
LRP1-212ENST00000556830 CAMSAP2Q08AD1 1489 aa17.04■□□□□ 0.32
LRP1-212ENST00000556830 GPATCH8Q9UKJ3 1502 aaKnown RBP17.02■□□□□ 0.32
LRP1-212ENST00000556830 DHX29Q7Z478 1369 aaKnown RBP17.02■□□□□ 0.31
LRP1-212ENST00000556830 KTN1Q86UP2 1357 aaKnown RBP17.02■□□□□ 0.31
LRP1-212ENST00000556830 DAPK1P53355 1430 aa17.02■□□□□ 0.31
LRP1-212ENST00000556830 ADGBQ8N7X0 1667 aa17.01■□□□□ 0.31
LRP1-212ENST00000556830 L3MBTL2Q969R5 705 aa17.01■□□□□ 0.31
LRP1-212ENST00000556830 BACH2Q9BYV9 841 aa17.01■□□□□ 0.31
LRP1-212ENST00000556830 CHIC2Q9UKJ5 165 aa17.01■□□□□ 0.31
LRP1-212ENST00000556830 ZNF644Q9H582 1327 aaPredicted RBP17.01■□□□□ 0.31
LRP1-212ENST00000556830 ABCC10Q5T3U5 1492 aa17.01■□□□□ 0.31
LRP1-212ENST00000556830 TEX14Q8IWB6 1497 aa17.01■□□□□ 0.31
LRP1-212ENST00000556830 ABCC2Q92887 1545 aa17■□□□□ 0.31
LRP1-212ENST00000556830 ROCK2O75116 1388 aaKnown RBP17■□□□□ 0.31
LRP1-212ENST00000556830 PDE4AP27815 886 aa17■□□□□ 0.31
LRP1-212ENST00000556830 GSE1Q14687 1217 aa16.98■□□□□ 0.31
LRP1-212ENST00000556830 RRP7BPQ9NSQ0 103 aa16.98■□□□□ 0.31
LRP1-212ENST00000556830 ABCC5O15440 1437 aa16.98■□□□□ 0.31
LRP1-212ENST00000556830 MPHOSPH9Q99550 1183 aa16.98■□□□□ 0.31
LRP1-212ENST00000556830 CDC42BPBQ9Y5S2 1711 aa16.97■□□□□ 0.31
LRP1-212ENST00000556830 ANKRD30BQ9BXX2 1392 aa16.97■□□□□ 0.31
LRP1-212ENST00000556830 ZCCHC11Q5TAX3 1644 aaKnown RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms