RNA–Protein interactions for RNA: ENST00000556247.1

LRP1-210, Transcript of LDL receptor related protein 1, humanhuman

TSL 3

Gene LRP1, Length 611 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-210ENST00000556247 MAPKBP1O60336 1514 aa25.7■■□□□ 1.7
LRP1-210ENST00000556247 PLCH2O75038 1416 aa25.69■■□□□ 1.7
LRP1-210ENST00000556247 CDC42BPBQ9Y5S2 1711 aa25.68■■□□□ 1.7
LRP1-210ENST00000556247 ARHGAP5Q13017 1502 aa25.68■■□□□ 1.7
LRP1-210ENST00000556247 ABCA9Q8IUA7 1624 aa25.66■■□□□ 1.7
LRP1-210ENST00000556247 EFCAB2Q5VUJ9 269 aa25.66■■□□□ 1.7
LRP1-210ENST00000556247 PTPRKQ15262 1439 aa25.63■■□□□ 1.69
LRP1-210ENST00000556247 DAPK1P53355 1430 aa25.62■■□□□ 1.69
LRP1-210ENST00000556247 DNMT1P26358 1616 aaKnown RBP25.61■■□□□ 1.69
LRP1-210ENST00000556247 ARAP3Q8WWN8 1544 aa25.6■■□□□ 1.69
LRP1-210ENST00000556247 ABCC5O15440 1437 aa25.6■■□□□ 1.69
LRP1-210ENST00000556247 CHIC2Q9UKJ5 165 aa25.59■■□□□ 1.69
LRP1-210ENST00000556247 SAMD9LQ8IVG5 1584 aa25.59■■□□□ 1.69
LRP1-210ENST00000556247 PLEKHH2Q8IVE3 1493 aa25.59■■□□□ 1.69
LRP1-210ENST00000556247 HNRNPMP52272 730 aaKnown RBP eCLIP25.58■■□□□ 1.69
LRP1-210ENST00000556247 SETD5Q9C0A6 1442 aa25.57■■□□□ 1.68
LRP1-210ENST00000556247 RSPH4AQ5TD94 716 aa25.57■■□□□ 1.68
LRP1-210ENST00000556247 DNAJC5Q9H3Z4 198 aa25.57■■□□□ 1.68
LRP1-210ENST00000556247 CD109Q6YHK3 1445 aa25.56■■□□□ 1.68
LRP1-210ENST00000556247 KIAA1107Q9UPP5 1409 aa25.54■■□□□ 1.68
LRP1-210ENST00000556247 TSPY4P0CV99 314 aa25.53■■□□□ 1.68
LRP1-210ENST00000556247 TSPY10P0CW01 314 aa25.53■■□□□ 1.68
LRP1-210ENST00000556247 ARHGEF5Q12774 1597 aa25.52■■□□□ 1.68
LRP1-210ENST00000556247 FANCAO15360 1455 aa25.52■■□□□ 1.68
LRP1-210ENST00000556247 AKNAQ7Z591 1439 aa25.51■■□□□ 1.67
LRP1-210ENST00000556247 MBD5Q9P267 1494 aa25.51■■□□□ 1.67
LRP1-210ENST00000556247 GLI2P10070 1586 aa25.51■■□□□ 1.67
LRP1-210ENST00000556247 HFM1A2PYH4 1435 aa25.5■■□□□ 1.67
LRP1-210ENST00000556247 FAM69CQ0P6D2 419 aa25.5■■□□□ 1.67
LRP1-210ENST00000556247 ROCK1Q13464 1354 aa25.5■■□□□ 1.67
LRP1-210ENST00000556247 RRP7BPQ9NSQ0 103 aa25.5■■□□□ 1.67
LRP1-210ENST00000556247 SYCP2Q9BX26 1530 aa25.49■■□□□ 1.67
LRP1-210ENST00000556247 RAB3GAP2Q9H2M9 1393 aa25.49■■□□□ 1.67
LRP1-210ENST00000556247 CCER1Q8TC90 406 aaPredicted RBP25.49■■□□□ 1.67
LRP1-210ENST00000556247 CCDC141Q6ZP82 1450 aa25.48■■□□□ 1.67
LRP1-210ENST00000556247 CROCC2H7BZ55 1655 aa25.48■■□□□ 1.67
LRP1-210ENST00000556247 HRCP23327 699 aa25.47■■□□□ 1.67
LRP1-210ENST00000556247 ABCC1P33527 1531 aa25.46■■□□□ 1.67
LRP1-210ENST00000556247 SHANK2Q9UPX8 1470 aa25.46■■□□□ 1.67
LRP1-210ENST00000556247 NAIPQ13075 1403 aa25.46■■□□□ 1.67
LRP1-210ENST00000556247 DIP2BQ9P265 1576 aa25.45■■□□□ 1.66
LRP1-210ENST00000556247 C9orf84Q5VXU9 1444 aa25.44■■□□□ 1.66
LRP1-210ENST00000556247 CFAP74Q9C0B2 1584 aa25.44■■□□□ 1.66
LRP1-210ENST00000556247 ANKRD30AQ9BXX3 1397 aa25.44■■□□□ 1.66
LRP1-210ENST00000556247 ARHGEF12Q9NZN5 1544 aa25.42■■□□□ 1.66
LRP1-210ENST00000556247 ADGBQ8N7X0 1667 aa25.42■■□□□ 1.66
LRP1-210ENST00000556247 MAP3K4Q9Y6R4 1608 aa25.42■■□□□ 1.66
LRP1-210ENST00000556247 ADGRL2O95490 1459 aa25.41■■□□□ 1.66
LRP1-210ENST00000556247 ADGRL1O94910 1474 aa25.4■■□□□ 1.66
LRP1-210ENST00000556247 NCOA1Q15788 1441 aa25.4■■□□□ 1.66
LRP1-210ENST00000556247 GCC2Q8IWJ2 1684 aa25.39■■□□□ 1.66
LRP1-210ENST00000556247 SCAPERQ9BY12 1400 aa25.39■■□□□ 1.66
LRP1-210ENST00000556247 TRAPPC8Q9Y2L5 1435 aa25.37■■□□□ 1.65
LRP1-210ENST00000556247 NEO1Q92859 1461 aa25.37■■□□□ 1.65
LRP1-210ENST00000556247 MAST1Q9Y2H9 1570 aa25.35■■□□□ 1.65
LRP1-210ENST00000556247 AFAP1Q8N556 730 aa25.34■■□□□ 1.65
LRP1-210ENST00000556247 SPAG9O60271 1321 aaKnown RBP25.33■■□□□ 1.64
LRP1-210ENST00000556247 ACIN1Q9UKV3 1341 aaKnown RBP25.33■■□□□ 1.64
LRP1-210ENST00000556247 DHX57Q6P158 1386 aaKnown RBP25.31■■□□□ 1.64
LRP1-210ENST00000556247 ZEB1P37275 1124 aaPredicted RBP25.3■■□□□ 1.64
LRP1-210ENST00000556247 KIF15Q9NS87 1388 aa25.3■■□□□ 1.64
LRP1-210ENST00000556247 KIF13AQ9H1H9 1805 aa25.29■■□□□ 1.64
LRP1-210ENST00000556247 TEX14Q8IWB6 1497 aa25.28■■□□□ 1.64
LRP1-210ENST00000556247 MYT1LQ9UL68 1186 aa25.28■■□□□ 1.64
LRP1-210ENST00000556247 RTEL1-TNFRSF6BF6WH68 1400 aa25.28■■□□□ 1.64
LRP1-210ENST00000556247 TSPOAP1O95153 1857 aa25.28■■□□□ 1.64
LRP1-210ENST00000556247 TRIM52Q96A61 297 aa25.27■■□□□ 1.64
LRP1-210ENST00000556247 ZNF518AQ6AHZ1 1483 aa25.26■■□□□ 1.63
LRP1-210ENST00000556247 KDM6BO15054 1643 aa25.26■■□□□ 1.63
LRP1-210ENST00000556247 ANKRD50Q9ULJ7 1429 aa25.25■■□□□ 1.63
LRP1-210ENST00000556247 PLXNC1O60486 1568 aa25.24■■□□□ 1.63
LRP1-210ENST00000556247 DENND4BO75064 1496 aaPredicted RBP25.24■■□□□ 1.63
LRP1-210ENST00000556247 POGZQ7Z3K3 1410 aa25.23■■□□□ 1.63
LRP1-210ENST00000556247 PPRC1Q5VV67 1664 aaKnown RBP25.22■■□□□ 1.63
LRP1-210ENST00000556247 CLSPNQ9HAW4 1339 aa25.2■■□□□ 1.62
LRP1-210ENST00000556247 ATP7AQ04656 1500 aa25.19■■□□□ 1.62
LRP1-210ENST00000556247 ZFYVE16Q7Z3T8 1539 aa25.19■■□□□ 1.62
LRP1-210ENST00000556247 DUOX2Q9NRD8 1548 aa25.18■■□□□ 1.62
LRP1-210ENST00000556247 INO80Q9ULG1 1556 aaPredicted RBP25.18■■□□□ 1.62
LRP1-210ENST00000556247 RAPGEF3O95398 923 aa25.17■■□□□ 1.62
LRP1-210ENST00000556247 TRHP20396 242 aaPredicted RBP25.17■■□□□ 1.62
LRP1-210ENST00000556247 KDM5CP41229 1560 aa25.15■■□□□ 1.62
LRP1-210ENST00000556247 MLH3Q9UHC1 1453 aa25.14■■□□□ 1.61
LRP1-210ENST00000556247 ERBINQ96RT1 1412 aa25.12■■□□□ 1.61
LRP1-210ENST00000556247 MPHOSPH9Q99550 1183 aa25.11■■□□□ 1.61
LRP1-210ENST00000556247 KIDINS220Q9ULH0 1771 aa25.1■■□□□ 1.61
LRP1-210ENST00000556247 HECW2Q9P2P5 1572 aa25.1■■□□□ 1.61
LRP1-210ENST00000556247 RICTORQ6R327 1708 aa25.1■■□□□ 1.61
LRP1-210ENST00000556247 DHX29Q7Z478 1369 aaKnown RBP25.07■■□□□ 1.6
LRP1-210ENST00000556247 SLC4A1APQ9BWU0 796 aaKnown RBP25.07■■□□□ 1.6
LRP1-210ENST00000556247 NUP155O75694 1391 aa25.06■■□□□ 1.6
LRP1-210ENST00000556247 FRMPD1Q5SYB0 1578 aa25.03■■□□□ 1.6
LRP1-210ENST00000556247 A2MP01023 1474 aa25.02■■□□□ 1.6
LRP1-210ENST00000556247 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.02■■□□□ 1.62e-7■□□□□ 10.3
LRP1-210ENST00000556247 PZPP20742 1482 aa25.02■■□□□ 1.6
LRP1-210ENST00000556247 ZMYM4Q5VZL5 1548 aa25■■□□□ 1.59
LRP1-210ENST00000556247 KDM5DQ9BY66 1539 aa25■■□□□ 1.59
LRP1-210ENST00000556247 UNC13BO14795 1591 aa24.99■■□□□ 1.59
LRP1-210ENST00000556247 KIF3BO15066 747 aa24.99■■□□□ 1.59
LRP1-210ENST00000556247 MAGI2Q86UL8 1455 aa24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms