RNA–Protein interactions for RNA: ENST00000555962.5

CHD8-210, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 1,232 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-210ENST00000555962 PLEKHD1A6NEE1 506 aa14.28□□□□□ -0.12
CHD8-210ENST00000555962 TTC37Q6PGP7 1564 aa14.27□□□□□ -0.12
CHD8-210ENST00000555962 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.26□□□□□ -0.13
CHD8-210ENST00000555962 TROQ12816 1431 aaPredicted RBP14.25□□□□□ -0.13
CHD8-210ENST00000555962 TIAM1Q13009 1591 aa14.25□□□□□ -0.13
CHD8-210ENST00000555962 AMER1Q5JTC6 1135 aaPredicted RBP14.24□□□□□ -0.13
CHD8-210ENST00000555962 CD109Q6YHK3 1445 aa14.24□□□□□ -0.13
CHD8-210ENST00000555962 FKBP8Q14318 412 aa14.23□□□□□ -0.13
CHD8-210ENST00000555962 RTN4Q9NQC3 1192 aaKnown RBP14.23□□□□□ -0.13
CHD8-210ENST00000555962 CDK11AQ9UQ88 783 aaPredicted RBP14.23□□□□□ -0.13
CHD8-210ENST00000555962 MYO5CQ9NQX4 1742 aa14.22□□□□□ -0.13
CHD8-210ENST00000555962 CDC42BPAQ5VT25 1732 aa14.2□□□□□ -0.14
CHD8-210ENST00000555962 CDC42BPBQ9Y5S2 1711 aa14.19□□□□□ -0.14
CHD8-210ENST00000555962 EHBP1L1Q8N3D4 1523 aa14.19□□□□□ -0.14
CHD8-210ENST00000555962 TEX14Q8IWB6 1497 aa14.18□□□□□ -0.14
CHD8-210ENST00000555962 MAP3K1Q13233 1512 aa14.18□□□□□ -0.14
CHD8-210ENST00000555962 KDM6BO15054 1643 aa14.17□□□□□ -0.14
CHD8-210ENST00000555962 PREX2Q70Z35 1606 aa14.16□□□□□ -0.14
CHD8-210ENST00000555962 DCAF8L1A6NGE4 600 aa14.16□□□□□ -0.14
CHD8-210ENST00000555962 MTUS2Q5JR59 1369 aa14.16□□□□□ -0.14
CHD8-210ENST00000555962 SUPT6HQ7KZ85 1726 aaKnown RBP14.15□□□□□ -0.14
CHD8-210ENST00000555962 LRRC9Q6ZRR7 1453 aa14.15□□□□□ -0.14
CHD8-210ENST00000555962 COL17A1Q9UMD9 1497 aaPredicted RBP14.14□□□□□ -0.15
CHD8-210ENST00000555962 PLCH2O75038 1416 aa14.14□□□□□ -0.15
CHD8-210ENST00000555962 CFAP74Q9C0B2 1584 aa14.13□□□□□ -0.15
CHD8-210ENST00000555962 KANK4Q5T7N3 995 aaPredicted RBP14.13□□□□□ -0.15
CHD8-210ENST00000555962 ARAP3Q8WWN8 1544 aa14.13□□□□□ -0.15
CHD8-210ENST00000555962 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.12□□□□□ -0.151e-6■■■□□ 19
CHD8-210ENST00000555962 FANCAO15360 1455 aa14.12□□□□□ -0.15
CHD8-210ENST00000555962 NEO1Q92859 1461 aa14.12□□□□□ -0.15
CHD8-210ENST00000555962 ITSN2Q9NZM3 1697 aa14.1□□□□□ -0.15
CHD8-210ENST00000555962 ARHGAP5Q13017 1502 aa14.1□□□□□ -0.15
CHD8-210ENST00000555962 NCOA2Q15596 1464 aa14.1□□□□□ -0.15
CHD8-210ENST00000555962 GPATCH8Q9UKJ3 1502 aaKnown RBP14.1□□□□□ -0.15
CHD8-210ENST00000555962 AKNAQ7Z591 1439 aa14.09□□□□□ -0.15
CHD8-210ENST00000555962 RICTORQ6R327 1708 aa14.08□□□□□ -0.16
CHD8-210ENST00000555962 APLP2Q06481 763 aa14.08□□□□□ -0.16
CHD8-210ENST00000555962 FRMPD1Q5SYB0 1578 aa14.08□□□□□ -0.16
CHD8-210ENST00000555962 PHLDB1Q86UU1 1377 aa14.07□□□□□ -0.16
CHD8-210ENST00000555962 SAMD9LQ8IVG5 1584 aa14.06□□□□□ -0.16
CHD8-210ENST00000555962 CCNB3Q8WWL7 1395 aa14.06□□□□□ -0.16
CHD8-210ENST00000555962 EFCAB2Q5VUJ9 269 aa14.05□□□□□ -0.16
CHD8-210ENST00000555962 ADGRL1O94910 1474 aa14.05□□□□□ -0.16
CHD8-210ENST00000555962 SLC24A1O60721 1099 aa14.04□□□□□ -0.16
CHD8-210ENST00000555962 ABCC1P33527 1531 aa14.04□□□□□ -0.16
CHD8-210ENST00000555962 ATF5Q9Y2D1 282 aaPredicted RBP14.03□□□□□ -0.16
CHD8-210ENST00000555962 ARHGEF12Q9NZN5 1544 aa14.02□□□□□ -0.16
CHD8-210ENST00000555962 DENND4BO75064 1496 aaPredicted RBP14.02□□□□□ -0.16
CHD8-210ENST00000555962 SCAPERQ9BY12 1400 aa14.02□□□□□ -0.16
CHD8-210ENST00000555962 RAPGEF3O95398 923 aa14.02□□□□□ -0.17
CHD8-210ENST00000555962 SAMD1Q6SPF0 538 aaPredicted RBP14□□□□□ -0.17
CHD8-210ENST00000555962 CFDP1Q9UEE9 299 aaPredicted RBP14□□□□□ -0.17
CHD8-210ENST00000555962 ZNF777Q9ULD5 760 aaPredicted RBP14□□□□□ -0.17
CHD8-210ENST00000555962 SYCP2Q9BX26 1530 aa14□□□□□ -0.17
CHD8-210ENST00000555962 POGZQ7Z3K3 1410 aa13.99□□□□□ -0.17
CHD8-210ENST00000555962 MYOM3Q5VTT5 1437 aa13.98□□□□□ -0.17
CHD8-210ENST00000555962 ZNF644Q9H582 1327 aaPredicted RBP13.98□□□□□ -0.17
CHD8-210ENST00000555962 ZMYM4Q5VZL5 1548 aa13.98□□□□□ -0.17
CHD8-210ENST00000555962 KDM5CP41229 1560 aa13.97□□□□□ -0.17
CHD8-210ENST00000555962 PPARGC1BQ86YN6 1023 aaKnown RBP13.97□□□□□ -0.17
CHD8-210ENST00000555962 CAMSAP2Q08AD1 1489 aa13.97□□□□□ -0.17
CHD8-210ENST00000555962 TRAPPC8Q9Y2L5 1435 aa13.97□□□□□ -0.17
CHD8-210ENST00000555962 ZNF518AQ6AHZ1 1483 aa13.95□□□□□ -0.18
CHD8-210ENST00000555962 PLEKHH2Q8IVE3 1493 aa13.95□□□□□ -0.18
CHD8-210ENST00000555962 PTPN23Q9H3S7 1636 aa13.95□□□□□ -0.18
CHD8-210ENST00000555962 KIAA1107Q9UPP5 1409 aa13.95□□□□□ -0.18
CHD8-210ENST00000555962 HNRNPMP52272 730 aaKnown RBP eCLIP13.94□□□□□ -0.18
CHD8-210ENST00000555962 AFAP1Q8N556 730 aa13.94□□□□□ -0.18
CHD8-210ENST00000555962 MIA2Q96PC5 1412 aa13.94□□□□□ -0.18
CHD8-210ENST00000555962 HECW2Q9P2P5 1572 aa13.94□□□□□ -0.18
CHD8-210ENST00000555962 U3KPZ7 1027 aaPredicted RBP13.94□□□□□ -0.18
CHD8-210ENST00000555962 ARHGEF40Q8TER5 1519 aa13.94□□□□□ -0.18
CHD8-210ENST00000555962 KIDINS220Q9ULH0 1771 aa13.94□□□□□ -0.18
CHD8-210ENST00000555962 MBD5Q9P267 1494 aa13.93□□□□□ -0.18
CHD8-210ENST00000555962 SIGLEC1Q9BZZ2 1709 aa13.93□□□□□ -0.18
CHD8-210ENST00000555962 FGD6Q6ZV73 1430 aa13.92□□□□□ -0.18
CHD8-210ENST00000555962 YEATS2Q9ULM3 1422 aa13.92□□□□□ -0.18
CHD8-210ENST00000555962 ZFYVE16Q7Z3T8 1539 aa13.92□□□□□ -0.18
CHD8-210ENST00000555962 ARHGEF5Q12774 1597 aa13.92□□□□□ -0.18
CHD8-210ENST00000555962 ABCA6Q8N139 1617 aa13.91□□□□□ -0.18
CHD8-210ENST00000555962 INO80Q9ULG1 1556 aaPredicted RBP13.91□□□□□ -0.18
CHD8-210ENST00000555962 MAGI2Q86UL8 1455 aa13.9□□□□□ -0.18
CHD8-210ENST00000555962 CROCC2H7BZ55 1655 aa13.89□□□□□ -0.19
CHD8-210ENST00000555962 DIP2CQ9Y2E4 1556 aa13.89□□□□□ -0.19
CHD8-210ENST00000555962 TCOF1Q13428 1488 aaKnown RBP13.89□□□□□ -0.19
CHD8-210ENST00000555962 MLH3Q9UHC1 1453 aa13.89□□□□□ -0.19
CHD8-210ENST00000555962 CCDC141Q6ZP82 1450 aa13.88□□□□□ -0.19
CHD8-210ENST00000555962 ATP7AQ04656 1500 aa13.87□□□□□ -0.19
CHD8-210ENST00000555962 DNMT1P26358 1616 aaKnown RBP13.86□□□□□ -0.19
CHD8-210ENST00000555962 ADGBQ8N7X0 1667 aa13.86□□□□□ -0.19
CHD8-210ENST00000555962 SPAG9O60271 1321 aaKnown RBP13.85□□□□□ -0.19
CHD8-210ENST00000555962 MAST1Q9Y2H9 1570 aa13.84□□□□□ -0.19
CHD8-210ENST00000555962 ATP10AO60312 1499 aa13.84□□□□□ -0.19
CHD8-210ENST00000555962 MYT1LQ9UL68 1186 aa13.83□□□□□ -0.2
CHD8-210ENST00000555962 REREQ9P2R6 1566 aa13.83□□□□□ -0.2
CHD8-210ENST00000555962 ABCC5O15440 1437 aa13.82□□□□□ -0.2
CHD8-210ENST00000555962 RSPH4AQ5TD94 716 aa13.82□□□□□ -0.2
CHD8-210ENST00000555962 RTEL1-TNFRSF6BF6WH68 1400 aa13.81□□□□□ -0.2
CHD8-210ENST00000555962 DAPK1P53355 1430 aa13.81□□□□□ -0.2
CHD8-210ENST00000555962 C9orf84Q5VXU9 1444 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms