RNA–Protein interactions for RNA: ENST00000555353.5

FOXN3-209, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 1,595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-209ENST00000555353 CDC42BPBQ9Y5S2 1711 aa32.26■■■□□ 2.76
FOXN3-209ENST00000555353 ADGRL1O94910 1474 aa32.22■■■□□ 2.75
FOXN3-209ENST00000555353 LRRC9Q6ZRR7 1453 aa32.21■■■□□ 2.75
FOXN3-209ENST00000555353 SUPT6HQ7KZ85 1726 aaKnown RBP32.21■■■□□ 2.75
FOXN3-209ENST00000555353 DENND4BO75064 1496 aaPredicted RBP32.2■■■□□ 2.75
FOXN3-209ENST00000555353 RAPGEF3O95398 923 aa32.2■■■□□ 2.75
FOXN3-209ENST00000555353 CCNB3Q8WWL7 1395 aa32.2■■■□□ 2.75
FOXN3-209ENST00000555353 GPATCH8Q9UKJ3 1502 aaKnown RBP32.18■■■□□ 2.74
FOXN3-209ENST00000555353 SCAPERQ9BY12 1400 aa32.16■■■□□ 2.74
FOXN3-209ENST00000555353 RICTORQ6R327 1708 aa32.15■■■□□ 2.74
FOXN3-209ENST00000555353 NCOA2Q15596 1464 aa32.14■■■□□ 2.74
FOXN3-209ENST00000555353 FRMPD1Q5SYB0 1578 aa32.14■■■□□ 2.74
FOXN3-209ENST00000555353 KANK4Q5T7N3 995 aaPredicted RBP32.13■■■□□ 2.73
FOXN3-209ENST00000555353 ITSN2Q9NZM3 1697 aa32.12■■■□□ 2.73
FOXN3-209ENST00000555353 CFDP1Q9UEE9 299 aaPredicted RBP32.11■■■□□ 2.73
FOXN3-209ENST00000555353 ZNF777Q9ULD5 760 aaPredicted RBP32.09■■■□□ 2.73
FOXN3-209ENST00000555353 POGZQ7Z3K3 1410 aa32.08■■■□□ 2.73
FOXN3-209ENST00000555353 ABCC1P33527 1531 aa32.06■■■□□ 2.72
FOXN3-209ENST00000555353 SAMD9LQ8IVG5 1584 aa32.04■■■□□ 2.72
FOXN3-209ENST00000555353 ZNF518AQ6AHZ1 1483 aa32.02■■■□□ 2.72
FOXN3-209ENST00000555353 ZMYM4Q5VZL5 1548 aa32.02■■■□□ 2.72
FOXN3-209ENST00000555353 PLEKHH2Q8IVE3 1493 aa31.99■■■□□ 2.71
FOXN3-209ENST00000555353 ARHGEF12Q9NZN5 1544 aa31.97■■■□□ 2.71
FOXN3-209ENST00000555353 AFAP1Q8N556 730 aa31.96■■■□□ 2.71
FOXN3-209ENST00000555353 SYCP2Q9BX26 1530 aa31.96■■■□□ 2.71
FOXN3-209ENST00000555353 MAGI2Q86UL8 1455 aa31.96■■■□□ 2.71
FOXN3-209ENST00000555353 KDM5CP41229 1560 aa31.94■■■□□ 2.7
FOXN3-209ENST00000555353 ARHGEF40Q8TER5 1519 aa31.94■■■□□ 2.7
FOXN3-209ENST00000555353 KIAA1107Q9UPP5 1409 aa31.93■■■□□ 2.7
FOXN3-209ENST00000555353 TRAPPC8Q9Y2L5 1435 aa31.93■■■□□ 2.7
FOXN3-209ENST00000555353 ZFYVE16Q7Z3T8 1539 aa31.93■■■□□ 2.7
FOXN3-209ENST00000555353 HNRNPMP52272 730 aaKnown RBP eCLIP31.91■■■□□ 2.78e-7■■■■□ 20.1
FOXN3-209ENST00000555353 ZNF644Q9H582 1327 aaPredicted RBP31.91■■■□□ 2.7
FOXN3-209ENST00000555353 MYT1LQ9UL68 1186 aa31.9■■■□□ 2.7
FOXN3-209ENST00000555353 MYOM3Q5VTT5 1437 aa31.89■■■□□ 2.7
FOXN3-209ENST00000555353 HECW2Q9P2P5 1572 aa31.88■■■□□ 2.69
FOXN3-209ENST00000555353 YEATS2Q9ULM3 1422 aa31.88■■■□□ 2.69
FOXN3-209ENST00000555353 CAMSAP2Q08AD1 1489 aa31.86■■■□□ 2.69
FOXN3-209ENST00000555353 MIA2Q96PC5 1412 aa31.83■■■□□ 2.69
FOXN3-209ENST00000555353 MLH3Q9UHC1 1453 aa31.83■■■□□ 2.69
FOXN3-209ENST00000555353 MBD5Q9P267 1494 aa31.79■■■□□ 2.68
FOXN3-209ENST00000555353 ATP10AO60312 1499 aa31.78■■■□□ 2.68
FOXN3-209ENST00000555353 SPAG9O60271 1321 aaKnown RBP31.78■■■□□ 2.68
FOXN3-209ENST00000555353 ARID4BQ4LE39 1312 aaPredicted RBP31.78■■■□□ 2.68
FOXN3-209ENST00000555353 KIDINS220Q9ULH0 1771 aa31.77■■■□□ 2.68
FOXN3-209ENST00000555353 KDM4FA0A1W2PPD8 638 aa31.76■■■□□ 2.67
FOXN3-209ENST00000555353 C9orf84Q5VXU9 1444 aa31.75■■■□□ 2.67
FOXN3-209ENST00000555353 ABCA6Q8N139 1617 aa31.75■■■□□ 2.67
FOXN3-209ENST00000555353 DIP2CQ9Y2E4 1556 aa31.74■■■□□ 2.67
FOXN3-209ENST00000555353 RSPH4AQ5TD94 716 aa31.74■■■□□ 2.67
FOXN3-209ENST00000555353 CCDC141Q6ZP82 1450 aa31.73■■■□□ 2.67
FOXN3-209ENST00000555353 ATP7AQ04656 1500 aa31.72■■■□□ 2.67
FOXN3-209ENST00000555353 PTPN23Q9H3S7 1636 aa31.71■■■□□ 2.67
FOXN3-209ENST00000555353 ARHGEF5Q12774 1597 aa31.71■■■□□ 2.67
FOXN3-209ENST00000555353 INO80Q9ULG1 1556 aaPredicted RBP31.71■■■□□ 2.67
FOXN3-209ENST00000555353 FGD6Q6ZV73 1430 aa31.71■■■□□ 2.67
FOXN3-209ENST00000555353 AEBP2Q6ZN18 517 aaPredicted RBP31.7■■■□□ 2.67
FOXN3-209ENST00000555353 PPARGC1BQ86YN6 1023 aaKnown RBP31.69■■■□□ 2.66
FOXN3-209ENST00000555353 SIGLEC1Q9BZZ2 1709 aa31.68■■■□□ 2.66
FOXN3-209ENST00000555353 BCORL1Q5H9F3 1711 aa31.66■■■□□ 2.66
FOXN3-209ENST00000555353 REREQ9P2R6 1566 aa31.65■■■□□ 2.66
FOXN3-209ENST00000555353 TSPY4P0CV99 314 aa31.64■■■□□ 2.65
FOXN3-209ENST00000555353 TSPY10P0CW01 314 aa31.64■■■□□ 2.65
FOXN3-209ENST00000555353 RTEL1-TNFRSF6BF6WH68 1400 aa31.63■■■□□ 2.65
FOXN3-209ENST00000555353 TCOF1Q13428 1488 aaKnown RBP31.62■■■□□ 2.65
FOXN3-209ENST00000555353 ADAMTSL3P82987 1691 aa31.6■■■□□ 2.65
FOXN3-209ENST00000555353 ADGBQ8N7X0 1667 aa31.58■■■□□ 2.65
FOXN3-209ENST00000555353 MLECQ14165 292 aa31.57■■■□□ 2.64
FOXN3-209ENST00000555353 FAM50AQ14320 339 aaKnown RBP31.55■■■□□ 2.64
FOXN3-209ENST00000555353 AGLP35573 1532 aa31.55■■■□□ 2.64
FOXN3-209ENST00000555353 A2MP01023 1474 aa31.55■■■□□ 2.64
FOXN3-209ENST00000555353 MAST1Q9Y2H9 1570 aa31.53■■■□□ 2.64
FOXN3-209ENST00000555353 DNMT1P26358 1616 aaKnown RBP31.53■■■□□ 2.64
FOXN3-209ENST00000555353 MADDQ8WXG6 1647 aa31.53■■■□□ 2.64
FOXN3-209ENST00000555353 CROCC2H7BZ55 1655 aa31.52■■■□□ 2.64
FOXN3-209ENST00000555353 PLXNC1O60486 1568 aa31.5■■■□□ 2.63
FOXN3-209ENST00000555353 ABCC5O15440 1437 aa31.5■■■□□ 2.63
FOXN3-209ENST00000555353 DAPK1P53355 1430 aa31.49■■■□□ 2.63
FOXN3-209ENST00000555353 SHANK2Q9UPX8 1470 aa31.48■■■□□ 2.63
FOXN3-209ENST00000555353 FER1L4A9Z1Z3 1794 aa31.48■■■□□ 2.63
FOXN3-209ENST00000555353 RIMS1Q86UR5 1692 aaKnown RBP31.45■■■□□ 2.63
FOXN3-209ENST00000555353 DHX29Q7Z478 1369 aaKnown RBP31.44■■■□□ 2.62
FOXN3-209ENST00000555353 PTPRMP28827 1452 aa31.41■■■□□ 2.62
FOXN3-209ENST00000555353 ESF1Q9H501 851 aaKnown RBP31.37■■■□□ 2.61
FOXN3-209ENST00000555353 CHIC2Q9UKJ5 165 aa31.36■■■□□ 2.61
FOXN3-209ENST00000555353 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.34■■■□□ 2.61
FOXN3-209ENST00000555353 ANKRD30AQ9BXX3 1397 aa31.33■■■□□ 2.61
FOXN3-209ENST00000555353 KIF15Q9NS87 1388 aa31.33■■■□□ 2.61
FOXN3-209ENST00000555353 KIF3BO15066 747 aa31.33■■■□□ 2.61
FOXN3-209ENST00000555353 GGT6Q6P531 493 aa31.33■■■□□ 2.61
FOXN3-209ENST00000555353 DUOX2Q9NRD8 1548 aa31.32■■■□□ 2.6
FOXN3-209ENST00000555353 RRP7BPQ9NSQ0 103 aa31.32■■■□□ 2.6
FOXN3-209ENST00000555353 RRBP1Q9P2E9 1410 aaKnown RBP31.31■■■□□ 2.6
FOXN3-209ENST00000555353 PLPPR3Q6T4P5 718 aa31.29■■■□□ 2.6
FOXN3-209ENST00000555353 CNTLNQ9NXG0 1405 aa31.28■■■□□ 2.6
FOXN3-209ENST00000555353 EIF2AK4Q9P2K8 1649 aaKnown RBP31.28■■■□□ 2.6
FOXN3-209ENST00000555353 ADGRL2O95490 1459 aa31.27■■■□□ 2.6
FOXN3-209ENST00000555353 NCOA1Q15788 1441 aa31.27■■■□□ 2.6
FOXN3-209ENST00000555353 ITGAEP38570 1179 aa31.26■■■□□ 2.59
FOXN3-209ENST00000555353 PPP6R1Q9UPN7 881 aa31.26■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms