RNA–Protein interactions for RNA: ENST00000555253.1

PGF-205, Transcript of placental growth factor, humanhuman

TSL 2

Gene PGF, Length 3,549 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGF-205ENST00000555253 DDRGK1Q96HY6 314 aa18.18■□□□□ 0.5
PGF-205ENST00000555253 GLIPR1L2Q4G1C9 344 aa18.17■□□□□ 0.5
PGF-205ENST00000555253 RCAN3Q9UKA8 241 aa18.17■□□□□ 0.5
PGF-205ENST00000555253 CNTLNQ9NXG0 1405 aa18.17■□□□□ 0.5
PGF-205ENST00000555253 SLKQ9H2G2 1235 aaPredicted RBP18.16■□□□□ 0.5
PGF-205ENST00000555253 RRP1P56182 461 aaKnown RBP18.15■□□□□ 0.5
PGF-205ENST00000555253 URB2Q14146 1524 aaKnown RBP18.14■□□□□ 0.5
PGF-205ENST00000555253 KIF7Q2M1P5 1343 aa18.14■□□□□ 0.5
PGF-205ENST00000555253 SPRYD3Q8NCJ5 442 aa18.14■□□□□ 0.49
PGF-205ENST00000555253 DNMBPQ6XZF7 1577 aa18.14■□□□□ 0.49
PGF-205ENST00000555253 WASHC2CQ9Y4E1 1318 aa18.14■□□□□ 0.49
PGF-205ENST00000555253 RSPH6AQ9H0K4 717 aa18.14■□□□□ 0.49
PGF-205ENST00000555253 GZF1Q9H116 711 aaPredicted RBP18.14■□□□□ 0.49
PGF-205ENST00000555253 CCDC7Q96M83 1385 aa18.14■□□□□ 0.49
PGF-205ENST00000555253 DCAF11Q8TEB1 546 aa18.14■□□□□ 0.49
PGF-205ENST00000555253 CCDC18Q5T9S5 1454 aa18.12■□□□□ 0.49
PGF-205ENST00000555253 CDCA7LQ96GN5 454 aa18.12■□□□□ 0.49
PGF-205ENST00000555253 MTUS2Q5JR59 1369 aa18.11■□□□□ 0.49
PGF-205ENST00000555253 NBPF8Q3BBV2 869 aa18.1■□□□□ 0.49
PGF-205ENST00000555253 CRBNQ96SW2 442 aa18.09■□□□□ 0.49
PGF-205ENST00000555253 PDS5BQ9NTI5 1447 aa18.09■□□□□ 0.49
PGF-205ENST00000555253 ZMYND15Q9H091 742 aa18.08■□□□□ 0.49
PGF-205ENST00000555253 KDM2AQ9Y2K7 1162 aa18.08■□□□□ 0.49
PGF-205ENST00000555253 LRRC9Q6ZRR7 1453 aa18.08■□□□□ 0.49
PGF-205ENST00000555253 FHAD1B1AJZ9 1412 aa18.07■□□□□ 0.48
PGF-205ENST00000555253 POGKQ9P215 609 aa18.07■□□□□ 0.48
PGF-205ENST00000555253 SMG6Q86US8 1419 aaKnown RBP18.06■□□□□ 0.48
PGF-205ENST00000555253 LAMC3Q9Y6N6 1575 aa18.06■□□□□ 0.48
PGF-205ENST00000555253 ABCA10Q8WWZ4 1543 aa18.05■□□□□ 0.48
PGF-205ENST00000555253 FHOD3Q2V2M9 1422 aa18.04■□□□□ 0.48
PGF-205ENST00000555253 MPHOSPH9Q99550 1183 aa18.03■□□□□ 0.48
PGF-205ENST00000555253 ARID3AQ99856 593 aa18.03■□□□□ 0.48
PGF-205ENST00000555253 AQRO60306 1485 aaKnown RBP eCLIP18.02■□□□□ 0.484e-8■□□□□ 9.3
PGF-205ENST00000555253 HSP90AA2PQ14568 343 aaPredicted RBP18.02■□□□□ 0.48
PGF-205ENST00000555253 SLC4A1APQ9BWU0 796 aaKnown RBP18.02■□□□□ 0.48
PGF-205ENST00000555253 KIF21AQ7Z4S6 1674 aa18■□□□□ 0.47
PGF-205ENST00000555253 RRAGDQ9NQL2 400 aaPredicted RBP18■□□□□ 0.47
PGF-205ENST00000555253 PNNQ9H307 717 aaKnown RBP18■□□□□ 0.47
PGF-205ENST00000555253 FAM43AQ8N2R8 423 aa17.99■□□□□ 0.47
PGF-205ENST00000555253 C20orf194Q5TEA3 1177 aa17.99■□□□□ 0.47
PGF-205ENST00000555253 PNISRQ8TF01 805 aaKnown RBP17.98■□□□□ 0.47
PGF-205ENST00000555253 TIAM1Q13009 1591 aa17.98■□□□□ 0.47
PGF-205ENST00000555253 HSP90AA1P07900 732 aaKnown RBP17.97■□□□□ 0.47
PGF-205ENST00000555253 CC2D1BQ5T0F9 858 aaKnown RBP17.97■□□□□ 0.47
PGF-205ENST00000555253 UACAQ9BZF9 1416 aa17.97■□□□□ 0.47
PGF-205ENST00000555253 GAPVD1Q14C86 1478 aa17.96■□□□□ 0.47
PGF-205ENST00000555253 MS4A1P11836 297 aa17.95■□□□□ 0.46
PGF-205ENST00000555253 PTPRKQ15262 1439 aa17.94■□□□□ 0.46
PGF-205ENST00000555253 PLEKHG5O94827 1062 aa17.92■□□□□ 0.46
PGF-205ENST00000555253 FMN1Q68DA7 1419 aa17.91■□□□□ 0.46
PGF-205ENST00000555253 A0A0U1RQG5 324 aaPredicted RBP17.91■□□□□ 0.46
PGF-205ENST00000555253 CARD11Q9BXL7 1154 aa17.89■□□□□ 0.45
PGF-205ENST00000555253 FGD6Q6ZV73 1430 aa17.88■□□□□ 0.45
PGF-205ENST00000555253 FAM161AQ3B820 660 aa17.88■□□□□ 0.45
PGF-205ENST00000555253 PANK2Q9BZ23 570 aa17.88■□□□□ 0.45
PGF-205ENST00000555253 RNF123Q5XPI4 1314 aa17.87■□□□□ 0.45
PGF-205ENST00000555253 NCOA1Q15788 1441 aa17.87■□□□□ 0.45
PGF-205ENST00000555253 ZNF777Q9ULD5 760 aaPredicted RBP17.86■□□□□ 0.45
PGF-205ENST00000555253 PCF11O94913 1555 aaKnown RBP17.85■□□□□ 0.45
PGF-205ENST00000555253 PODXL2Q9NZ53 605 aa17.85■□□□□ 0.45
PGF-205ENST00000555253 NAIPQ13075 1403 aa17.84■□□□□ 0.45
PGF-205ENST00000555253 CANXP27824 592 aaKnown RBP17.84■□□□□ 0.45
PGF-205ENST00000555253 FBLN2P98095 1184 aa17.83■□□□□ 0.44
PGF-205ENST00000555253 ST20-MTHFSA0A0A6YYL1 179 aa17.82■□□□□ 0.44
PGF-205ENST00000555253 CUL7Q14999 1698 aa17.82■□□□□ 0.44
PGF-205ENST00000555253 ZNF608Q9ULD9 1512 aaPredicted RBP17.81■□□□□ 0.44
PGF-205ENST00000555253 ERCC6Q03468 1493 aa17.81■□□□□ 0.44
PGF-205ENST00000555253 ABCA5Q8WWZ7 1642 aa17.81■□□□□ 0.44
PGF-205ENST00000555253 GOLGA6L3A6NEY3 463 aa17.81■□□□□ 0.44
PGF-205ENST00000555253 MRC2Q9UBG0 1479 aa17.81■□□□□ 0.44
PGF-205ENST00000555253 ZBTB7CA1YPR0 619 aa17.81■□□□□ 0.44
PGF-205ENST00000555253 L1TD1Q5T7N2 865 aaKnown RBP17.8■□□□□ 0.44
PGF-205ENST00000555253 USP47Q96K76 1375 aa17.8■□□□□ 0.44
PGF-205ENST00000555253 HFM1A2PYH4 1435 aa17.79■□□□□ 0.44
PGF-205ENST00000555253 BECN1Q14457 450 aa17.78■□□□□ 0.44
PGF-205ENST00000555253 NCOA2Q15596 1464 aa17.78■□□□□ 0.44
PGF-205ENST00000555253 TARBP1Q13395 1621 aaKnown RBP17.77■□□□□ 0.44
PGF-205ENST00000555253 TRIM44Q96DX7 344 aaPredicted RBP17.77■□□□□ 0.44
PGF-205ENST00000555253 RGL3Q3MIN7 710 aa17.77■□□□□ 0.43
PGF-205ENST00000555253 C8orf34Q49A92 452 aa17.77■□□□□ 0.43
PGF-205ENST00000555253 MAP3K1Q13233 1512 aa17.75■□□□□ 0.43
PGF-205ENST00000555253 MYBBP1AQ9BQG0 1328 aaKnown RBP17.75■□□□□ 0.43
PGF-205ENST00000555253 SEC24BO95487 1268 aa17.74■□□□□ 0.43
PGF-205ENST00000555253 CTTNBP2Q8WZ74 1663 aa17.74■□□□□ 0.43
PGF-205ENST00000555253 XRCC6P12956 609 aaKnown RBP eCLIP17.73■□□□□ 0.43
PGF-205ENST00000555253 RBM10P98175 930 aaKnown RBP17.73■□□□□ 0.43
PGF-205ENST00000555253 CENPQQ7L2Z9 268 aaPredicted RBP17.73■□□□□ 0.43
PGF-205ENST00000555253 CCDC146Q8IYE0 955 aa17.73■□□□□ 0.43
PGF-205ENST00000555253 DHX29Q7Z478 1369 aaKnown RBP17.73■□□□□ 0.43
PGF-205ENST00000555253 KTN1Q86UP2 1357 aaKnown RBP17.72■□□□□ 0.43
PGF-205ENST00000555253 CASKIN1Q8WXD9 1431 aa17.72■□□□□ 0.43
PGF-205ENST00000555253 UPF2Q9HAU5 1272 aaKnown RBP17.72■□□□□ 0.43
PGF-205ENST00000555253 PTPN23Q9H3S7 1636 aa17.71■□□□□ 0.43
PGF-205ENST00000555253 EFCAB5A4FU69 1503 aa17.7■□□□□ 0.42
PGF-205ENST00000555253 NLRP13Q86W25 1043 aa17.7■□□□□ 0.42
PGF-205ENST00000555253 WDR43Q15061 677 aaKnown RBP eCLIP17.7■□□□□ 0.42
PGF-205ENST00000555253 ZNF644Q9H582 1327 aaPredicted RBP17.7■□□□□ 0.42
PGF-205ENST00000555253 PKD2Q13563 968 aa17.69■□□□□ 0.42
PGF-205ENST00000555253 NEUROD2Q15784 382 aa17.69■□□□□ 0.42
PGF-205ENST00000555253 FYCO1Q9BQS8 1478 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms