RNA–Protein interactions for RNA: ENST00000555181.5

GSKIP-205, Transcript of GSK3B interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GSKIP, Length 2,218 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSKIP-205ENST00000555181 TCOF1Q13428 1488 aaKnown RBP24.87■■□□□ 1.57
GSKIP-205ENST00000555181 CHIC2Q9UKJ5 165 aa24.86■■□□□ 1.57
GSKIP-205ENST00000555181 ARHGAP5Q13017 1502 aa24.86■■□□□ 1.57
GSKIP-205ENST00000555181 PREX2Q70Z35 1606 aa24.85■■□□□ 1.57
GSKIP-205ENST00000555181 HNRNPMP52272 730 aaKnown RBP eCLIP24.84■■□□□ 1.578e-7■■■■□ 26.4
GSKIP-205ENST00000555181 MYO5CQ9NQX4 1742 aa24.83■■□□□ 1.57
GSKIP-205ENST00000555181 PLCH2O75038 1416 aa24.83■■□□□ 1.57
GSKIP-205ENST00000555181 ABCA9Q8IUA7 1624 aa24.82■■□□□ 1.56
GSKIP-205ENST00000555181 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.81■■□□□ 1.56
GSKIP-205ENST00000555181 FAM69CQ0P6D2 419 aa24.81■■□□□ 1.56
GSKIP-205ENST00000555181 SAMD9LQ8IVG5 1584 aa24.8■■□□□ 1.56
GSKIP-205ENST00000555181 ABCC5O15440 1437 aa24.77■■□□□ 1.56
GSKIP-205ENST00000555181 CD109Q6YHK3 1445 aa24.77■■□□□ 1.56
GSKIP-205ENST00000555181 DAPK1P53355 1430 aa24.75■■□□□ 1.55
GSKIP-205ENST00000555181 ARHGEF12Q9NZN5 1544 aa24.75■■□□□ 1.55
GSKIP-205ENST00000555181 EFCAB2Q5VUJ9 269 aa24.74■■□□□ 1.55
GSKIP-205ENST00000555181 RRP7BPQ9NSQ0 103 aa24.74■■□□□ 1.55
GSKIP-205ENST00000555181 SYCP2Q9BX26 1530 aa24.74■■□□□ 1.55
GSKIP-205ENST00000555181 FANCAO15360 1455 aa24.73■■□□□ 1.55
GSKIP-205ENST00000555181 DIP2BQ9P265 1576 aa24.73■■□□□ 1.55
GSKIP-205ENST00000555181 MBD5Q9P267 1494 aa24.72■■□□□ 1.55
GSKIP-205ENST00000555181 DNMT1P26358 1616 aaKnown RBP24.7■■□□□ 1.54
GSKIP-205ENST00000555181 AFAP1Q8N556 730 aa24.67■■□□□ 1.54
GSKIP-205ENST00000555181 TRAPPC8Q9Y2L5 1435 aa24.66■■□□□ 1.54
GSKIP-205ENST00000555181 TSPOAP1O95153 1857 aa24.65■■□□□ 1.54
GSKIP-205ENST00000555181 RAB3GAP2Q9H2M9 1393 aa24.64■■□□□ 1.53
GSKIP-205ENST00000555181 MAP3K4Q9Y6R4 1608 aa24.64■■□□□ 1.53
GSKIP-205ENST00000555181 ABCC1P33527 1531 aa24.64■■□□□ 1.53
GSKIP-205ENST00000555181 ARAP3Q8WWN8 1544 aa24.63■■□□□ 1.53
GSKIP-205ENST00000555181 KIF13AQ9H1H9 1805 aa24.62■■□□□ 1.53
GSKIP-205ENST00000555181 GLI2P10070 1586 aa24.62■■□□□ 1.53
GSKIP-205ENST00000555181 ADGRL1O94910 1474 aa24.62■■□□□ 1.53
GSKIP-205ENST00000555181 AKNAQ7Z591 1439 aa24.62■■□□□ 1.53
GSKIP-205ENST00000555181 SCAPERQ9BY12 1400 aa24.61■■□□□ 1.53
GSKIP-205ENST00000555181 NAIPQ13075 1403 aa24.61■■□□□ 1.53
GSKIP-205ENST00000555181 C9orf84Q5VXU9 1444 aa24.6■■□□□ 1.53
GSKIP-205ENST00000555181 CCDC141Q6ZP82 1450 aa24.6■■□□□ 1.53
GSKIP-205ENST00000555181 SETD5Q9C0A6 1442 aa24.59■■□□□ 1.53
GSKIP-205ENST00000555181 KIAA1107Q9UPP5 1409 aa24.59■■□□□ 1.53
GSKIP-205ENST00000555181 HFM1A2PYH4 1435 aa24.58■■□□□ 1.53
GSKIP-205ENST00000555181 TSPY4P0CV99 314 aa24.58■■□□□ 1.53
GSKIP-205ENST00000555181 TSPY10P0CW01 314 aa24.58■■□□□ 1.53
GSKIP-205ENST00000555181 CROCC2H7BZ55 1655 aa24.58■■□□□ 1.53
GSKIP-205ENST00000555181 ARHGEF5Q12774 1597 aa24.57■■□□□ 1.52
GSKIP-205ENST00000555181 KDM6BO15054 1643 aa24.57■■□□□ 1.52
GSKIP-205ENST00000555181 RAPGEF3O95398 923 aa24.57■■□□□ 1.52
GSKIP-205ENST00000555181 TRHP20396 242 aaPredicted RBP24.57■■□□□ 1.52
GSKIP-205ENST00000555181 NCOA1Q15788 1441 aa24.56■■□□□ 1.52
GSKIP-205ENST00000555181 PLEKHH2Q8IVE3 1493 aa24.55■■□□□ 1.52
GSKIP-205ENST00000555181 PPRC1Q5VV67 1664 aaKnown RBP24.54■■□□□ 1.52
GSKIP-205ENST00000555181 CCER1Q8TC90 406 aaPredicted RBP24.51■■□□□ 1.51
GSKIP-205ENST00000555181 ROCK1Q13464 1354 aa24.5■■□□□ 1.51
GSKIP-205ENST00000555181 RSPH4AQ5TD94 716 aa24.5■■□□□ 1.51
GSKIP-205ENST00000555181 SHANK2Q9UPX8 1470 aa24.49■■□□□ 1.51
GSKIP-205ENST00000555181 ANKRD30AQ9BXX3 1397 aa24.49■■□□□ 1.51
GSKIP-205ENST00000555181 SPAG9O60271 1321 aaKnown RBP24.48■■□□□ 1.51
GSKIP-205ENST00000555181 ADGRL2O95490 1459 aa24.47■■□□□ 1.51
GSKIP-205ENST00000555181 NEO1Q92859 1461 aa24.47■■□□□ 1.51
GSKIP-205ENST00000555181 KIF15Q9NS87 1388 aa24.47■■□□□ 1.51
GSKIP-205ENST00000555181 MYT1LQ9UL68 1186 aa24.47■■□□□ 1.51
GSKIP-205ENST00000555181 ADGBQ8N7X0 1667 aa24.46■■□□□ 1.51
GSKIP-205ENST00000555181 GCC2Q8IWJ2 1684 aa24.44■■□□□ 1.5
GSKIP-205ENST00000555181 POGZQ7Z3K3 1410 aa24.44■■□□□ 1.5
GSKIP-205ENST00000555181 CFAP74Q9C0B2 1584 aa24.43■■□□□ 1.5
GSKIP-205ENST00000555181 DHX57Q6P158 1386 aaKnown RBP24.43■■□□□ 1.5
GSKIP-205ENST00000555181 COL17A1Q9UMD9 1497 aaPredicted RBP24.42■■□□□ 1.5
GSKIP-205ENST00000555181 ZFYVE16Q7Z3T8 1539 aa24.41■■□□□ 1.5
GSKIP-205ENST00000555181 ZNF518AQ6AHZ1 1483 aa24.41■■□□□ 1.5
GSKIP-205ENST00000555181 ANKRD50Q9ULJ7 1429 aa24.41■■□□□ 1.5
GSKIP-205ENST00000555181 DENND4BO75064 1496 aaPredicted RBP24.41■■□□□ 1.5
GSKIP-205ENST00000555181 MAST1Q9Y2H9 1570 aa24.39■■□□□ 1.5
GSKIP-205ENST00000555181 TRIM52Q96A61 297 aa24.39■■□□□ 1.49
GSKIP-205ENST00000555181 TEX14Q8IWB6 1497 aa24.38■■□□□ 1.49
GSKIP-205ENST00000555181 ATP7AQ04656 1500 aa24.37■■□□□ 1.49
GSKIP-205ENST00000555181 INO80Q9ULG1 1556 aaPredicted RBP24.35■■□□□ 1.49
GSKIP-205ENST00000555181 KIDINS220Q9ULH0 1771 aa24.35■■□□□ 1.49
GSKIP-205ENST00000555181 FRMPD1Q5SYB0 1578 aa24.35■■□□□ 1.49
GSKIP-205ENST00000555181 RICTORQ6R327 1708 aa24.35■■□□□ 1.49
GSKIP-205ENST00000555181 KDM5CP41229 1560 aa24.34■■□□□ 1.49
GSKIP-205ENST00000555181 RTEL1-TNFRSF6BF6WH68 1400 aa24.32■■□□□ 1.48
GSKIP-205ENST00000555181 PLXNC1O60486 1568 aa24.32■■□□□ 1.48
GSKIP-205ENST00000555181 YEATS2Q9ULM3 1422 aa24.32■■□□□ 1.48
GSKIP-205ENST00000555181 HRCP23327 699 aa24.31■■□□□ 1.48
GSKIP-205ENST00000555181 FOXD1Q16676 465 aa24.3■■□□□ 1.48
GSKIP-205ENST00000555181 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.29■■□□□ 1.48
GSKIP-205ENST00000555181 HECW2Q9P2P5 1572 aa24.28■■□□□ 1.48
GSKIP-205ENST00000555181 MLH3Q9UHC1 1453 aa24.27■■□□□ 1.48
GSKIP-205ENST00000555181 DUOX2Q9NRD8 1548 aa24.26■■□□□ 1.47
GSKIP-205ENST00000555181 ABCA6Q8N139 1617 aa24.25■■□□□ 1.47
GSKIP-205ENST00000555181 MPHOSPH9Q99550 1183 aa24.24■■□□□ 1.47
GSKIP-205ENST00000555181 NUP155O75694 1391 aa24.24■■□□□ 1.47
GSKIP-205ENST00000555181 KIF3BO15066 747 aa24.22■■□□□ 1.47
GSKIP-205ENST00000555181 SLC4A1APQ9BWU0 796 aaKnown RBP24.21■■□□□ 1.47
GSKIP-205ENST00000555181 PZPP20742 1482 aa24.21■■□□□ 1.47
GSKIP-205ENST00000555181 DHX29Q7Z478 1369 aaKnown RBP24.2■■□□□ 1.47
GSKIP-205ENST00000555181 ERBINQ96RT1 1412 aa24.2■■□□□ 1.46
GSKIP-205ENST00000555181 SIN3AQ96ST3 1273 aa24.19■■□□□ 1.46
GSKIP-205ENST00000555181 DIP2CQ9Y2E4 1556 aa24.19■■□□□ 1.46
GSKIP-205ENST00000555181 A2MP01023 1474 aa24.19■■□□□ 1.46
GSKIP-205ENST00000555181 ZMYM4Q5VZL5 1548 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms