RNA–Protein interactions for RNA: ENST00000554455.5

HNRNPC-211, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-211ENST00000554455 TPM2P07951 284 aa11.36□□□□□ -0.59
HNRNPC-211ENST00000554455 ARAP1Q96P48 1450 aa11.36□□□□□ -0.59
HNRNPC-211ENST00000554455 CLCN1P35523 988 aa11.36□□□□□ -0.59
HNRNPC-211ENST00000554455 NCAPD3P42695 1498 aa11.35□□□□□ -0.59
HNRNPC-211ENST00000554455 CUX2O14529 1486 aa11.34□□□□□ -0.59
HNRNPC-211ENST00000554455 ANP32BQ92688 251 aaKnown RBP11.34□□□□□ -0.59
HNRNPC-211ENST00000554455 MAP7D2Q96T17 732 aa11.34□□□□□ -0.59
HNRNPC-211ENST00000554455 MMP14P50281 582 aa11.33□□□□□ -0.59
HNRNPC-211ENST00000554455 TMEM51Q9NW97 253 aa11.33□□□□□ -0.59
HNRNPC-211ENST00000554455 TPRNQ4KMQ1 711 aa11.33□□□□□ -0.6
HNRNPC-211ENST00000554455 GRIPAP1Q4V328 841 aa11.33□□□□□ -0.6
HNRNPC-211ENST00000554455 RGS22Q8NE09 1264 aa11.33□□□□□ -0.6
HNRNPC-211ENST00000554455 PPP4R2Q9NY27 417 aa11.33□□□□□ -0.6
HNRNPC-211ENST00000554455 HNRNPUL2Q1KMD3 747 aaKnown RBP11.32□□□□□ -0.6
HNRNPC-211ENST00000554455 TICAM2Q86XR7 235 aa11.32□□□□□ -0.6
HNRNPC-211ENST00000554455 CNPY4Q8N129 248 aa11.32□□□□□ -0.6
HNRNPC-211ENST00000554455 PNNQ9H307 717 aaKnown RBP11.32□□□□□ -0.6
HNRNPC-211ENST00000554455 RRBP1Q9P2E9 1410 aaKnown RBP11.32□□□□□ -0.6
HNRNPC-211ENST00000554455 CUX1P39880 1505 aa11.31□□□□□ -0.6
HNRNPC-211ENST00000554455 RRAGDQ9NQL2 400 aaPredicted RBP11.31□□□□□ -0.6
HNRNPC-211ENST00000554455 KIF27Q86VH2 1401 aa11.3□□□□□ -0.6
HNRNPC-211ENST00000554455 PRDM2Q13029 1718 aa11.29□□□□□ -0.6
HNRNPC-211ENST00000554455 DHX57Q6P158 1386 aaKnown RBP11.29□□□□□ -0.6
HNRNPC-211ENST00000554455 ZNF830Q96NB3 372 aaPredicted RBP11.28□□□□□ -0.6
HNRNPC-211ENST00000554455 CLGNO14967 610 aa11.28□□□□□ -0.6
HNRNPC-211ENST00000554455 CFTRP13569 1480 aa11.28□□□□□ -0.6
HNRNPC-211ENST00000554455 MAP3K1Q13233 1512 aa11.27□□□□□ -0.6
HNRNPC-211ENST00000554455 DDRGK1Q96HY6 314 aa11.27□□□□□ -0.61
HNRNPC-211ENST00000554455 CCDC9Q9Y3X0 531 aaKnown RBP11.27□□□□□ -0.61
HNRNPC-211ENST00000554455 TAF3Q5VWG9 929 aa11.26□□□□□ -0.61
HNRNPC-211ENST00000554455 DMRT2Q9Y5R5 561 aa11.26□□□□□ -0.61
HNRNPC-211ENST00000554455 CLSTN1O94985 981 aa11.26□□□□□ -0.61
HNRNPC-211ENST00000554455 PTMAP06454 111 aaKnown RBP11.26□□□□□ -0.61
HNRNPC-211ENST00000554455 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.26□□□□□ -0.61
HNRNPC-211ENST00000554455 FRAT1Q92837 279 aaPredicted RBP11.25□□□□□ -0.61
HNRNPC-211ENST00000554455 SLC20A2Q08357 652 aa11.24□□□□□ -0.61
HNRNPC-211ENST00000554455 AXDND1Q5T1B0 1012 aaPredicted RBP11.24□□□□□ -0.61
HNRNPC-211ENST00000554455 KIF20AO95235 890 aa11.23□□□□□ -0.61
HNRNPC-211ENST00000554455 IRX3P78415 501 aaPredicted RBP11.23□□□□□ -0.61
HNRNPC-211ENST00000554455 DMTNQ08495 405 aa11.23□□□□□ -0.61
HNRNPC-211ENST00000554455 CCER2I3L3R5 266 aa11.23□□□□□ -0.61
HNRNPC-211ENST00000554455 MCCP23508 829 aa11.23□□□□□ -0.61
HNRNPC-211ENST00000554455 ZNF622Q969S3 477 aaKnown RBP eCLIP11.23□□□□□ -0.611e-21■□□□□ 9
HNRNPC-211ENST00000554455 ARHGAP35Q9NRY4 1499 aa11.23□□□□□ -0.61
HNRNPC-211ENST00000554455 IRX6P78412 446 aaPredicted RBP11.22□□□□□ -0.61
HNRNPC-211ENST00000554455 DCAF11Q8TEB1 546 aa11.22□□□□□ -0.61
HNRNPC-211ENST00000554455 KCNG1Q9UIX4 513 aa11.22□□□□□ -0.61
HNRNPC-211ENST00000554455 TERF1P54274 439 aa11.21□□□□□ -0.61
HNRNPC-211ENST00000554455 MTERF4Q7Z6M4 381 aaKnown RBP11.21□□□□□ -0.61
HNRNPC-211ENST00000554455 WWC1Q8IX03 1113 aa11.21□□□□□ -0.62
HNRNPC-211ENST00000554455 PPP4R3BQ5MIZ7 849 aa11.2□□□□□ -0.62
HNRNPC-211ENST00000554455 CCNB3Q8WWL7 1395 aa11.2□□□□□ -0.62
HNRNPC-211ENST00000554455 TMEM132AQ24JP5 1023 aa11.19□□□□□ -0.62
HNRNPC-211ENST00000554455 L1TD1Q5T7N2 865 aaKnown RBP11.18□□□□□ -0.62
HNRNPC-211ENST00000554455 TIAM1Q13009 1591 aa11.18□□□□□ -0.62
HNRNPC-211ENST00000554455 PTMSP20962 102 aa11.17□□□□□ -0.62
HNRNPC-211ENST00000554455 KANK4Q5T7N3 995 aaPredicted RBP11.17□□□□□ -0.62
HNRNPC-211ENST00000554455 PHF14O94880 888 aa11.16□□□□□ -0.62
HNRNPC-211ENST00000554455 FAM193AP78312 1265 aa11.16□□□□□ -0.62
HNRNPC-211ENST00000554455 POLR3GLQ9BT43 218 aa11.16□□□□□ -0.62
HNRNPC-211ENST00000554455 CFAP43Q8NDM7 1665 aa11.15□□□□□ -0.62
HNRNPC-211ENST00000554455 KCNA4P22459 653 aa11.15□□□□□ -0.62
HNRNPC-211ENST00000554455 PSEN1P49768 467 aa11.15□□□□□ -0.62
HNRNPC-211ENST00000554455 PUS7Q96PZ0 661 aaKnown RBP11.14□□□□□ -0.63
HNRNPC-211ENST00000554455 GTPBP4Q9BZE4 634 aaKnown RBP11.14□□□□□ -0.63
HNRNPC-211ENST00000554455 CC2D2AQ9P2K1 1620 aa11.14□□□□□ -0.63
HNRNPC-211ENST00000554455 GOLGA6L3A6NEY3 463 aa11.13□□□□□ -0.63
HNRNPC-211ENST00000554455 LETM1O95202 739 aaPredicted RBP11.13□□□□□ -0.63
HNRNPC-211ENST00000554455 TNNT2P45379 298 aaPredicted RBP11.13□□□□□ -0.63
HNRNPC-211ENST00000554455 NFKBIBQ15653 356 aa11.13□□□□□ -0.63
HNRNPC-211ENST00000554455 PLCD4Q9BRC7 762 aa11.13□□□□□ -0.63
HNRNPC-211ENST00000554455 YY1AP1Q9H869 796 aa11.13□□□□□ -0.63
HNRNPC-211ENST00000554455 PLCD3Q8N3E9 789 aa11.13□□□□□ -0.63
HNRNPC-211ENST00000554455 CEP120Q8N960 986 aa11.12□□□□□ -0.63
HNRNPC-211ENST00000554455 IGF1RP08069 1367 aa11.12□□□□□ -0.63
HNRNPC-211ENST00000554455 TRIM44Q96DX7 344 aaPredicted RBP11.11□□□□□ -0.63
HNRNPC-211ENST00000554455 HDAC5Q9UQL6 1122 aa11.11□□□□□ -0.63
HNRNPC-211ENST00000554455 MAPKBP1O60336 1514 aa11.11□□□□□ -0.63
HNRNPC-211ENST00000554455 FHAD1B1AJZ9 1412 aa11.11□□□□□ -0.63
HNRNPC-211ENST00000554455 LRRC9Q6ZRR7 1453 aa11.1□□□□□ -0.63
HNRNPC-211ENST00000554455 SETQ01105 290 aaPredicted RBP11.1□□□□□ -0.63
HNRNPC-211ENST00000554455 PPP4R3CPQ6ZMV5 832 aa11.1□□□□□ -0.63
HNRNPC-211ENST00000554455 LAS1LQ9Y4W2 734 aaKnown RBP11.1□□□□□ -0.63
HNRNPC-211ENST00000554455 PRDM10Q9NQV6 1147 aa11.09□□□□□ -0.63
HNRNPC-211ENST00000554455 ZHX1Q9UKY1 873 aaPredicted RBP11.09□□□□□ -0.63
HNRNPC-211ENST00000554455 CADPSQ9ULU8 1353 aa11.08□□□□□ -0.64
HNRNPC-211ENST00000554455 EFCAB5A4FU69 1503 aa11.08□□□□□ -0.64
HNRNPC-211ENST00000554455 SETD5Q9C0A6 1442 aa11.08□□□□□ -0.64
HNRNPC-211ENST00000554455 RAB3GAP2Q9H2M9 1393 aa11.08□□□□□ -0.64
HNRNPC-211ENST00000554455 AQRO60306 1485 aaKnown RBP eCLIP11.07□□□□□ -0.642e-7■■■■□ 24.5
HNRNPC-211ENST00000554455 FGD5Q6ZNL6 1462 aa11.07□□□□□ -0.64
HNRNPC-211ENST00000554455 CARMIL1Q5VZK9 1371 aa11.07□□□□□ -0.64
HNRNPC-211ENST00000554455 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.07□□□□□ -0.642e-10■□□□□ 8.9
HNRNPC-211ENST00000554455 KCNH8Q96L42 1107 aa11.07□□□□□ -0.64
HNRNPC-211ENST00000554455 SLC52A1Q9NWF4 448 aa11.07□□□□□ -0.64
HNRNPC-211ENST00000554455 IGSF3O75054 1194 aa11.06□□□□□ -0.64
HNRNPC-211ENST00000554455 ZSCAN20P17040 1043 aaPredicted RBP11.06□□□□□ -0.64
HNRNPC-211ENST00000554455 GEMIN8Q9NWZ8 242 aaKnown RBP11.05□□□□□ -0.64
HNRNPC-211ENST00000554455 PCF11O94913 1555 aaKnown RBP11.05□□□□□ -0.64
HNRNPC-211ENST00000554455 VGLL3A8MV65 326 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms