RNA–Protein interactions for RNA: ENST00000554131.5

PSEN1-210, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-210ENST00000554131 PHLDB1Q86UU1 1377 aa28.72■■■□□ 2.19
PSEN1-210ENST00000554131 NEO1Q92859 1461 aa28.72■■■□□ 2.19
PSEN1-210ENST00000554131 CFAP74Q9C0B2 1584 aa28.71■■■□□ 2.19
PSEN1-210ENST00000554131 ARHGAP5Q13017 1502 aa28.71■■■□□ 2.19
PSEN1-210ENST00000554131 PPARGC1BQ86YN6 1023 aaKnown RBP28.69■■■□□ 2.18
PSEN1-210ENST00000554131 MYOM3Q5VTT5 1437 aa28.68■■■□□ 2.18
PSEN1-210ENST00000554131 SAMD9LQ8IVG5 1584 aa28.66■■■□□ 2.18
PSEN1-210ENST00000554131 AKNAQ7Z591 1439 aa28.65■■■□□ 2.18
PSEN1-210ENST00000554131 EFCAB2Q5VUJ9 269 aa28.63■■■□□ 2.17
PSEN1-210ENST00000554131 COL17A1Q9UMD9 1497 aaPredicted RBP28.63■■■□□ 2.17
PSEN1-210ENST00000554131 ABCC1P33527 1531 aa28.61■■■□□ 2.17
PSEN1-210ENST00000554131 CFDP1Q9UEE9 299 aaPredicted RBP28.61■■■□□ 2.17
PSEN1-210ENST00000554131 MIA2Q96PC5 1412 aa28.6■■■□□ 2.17
PSEN1-210ENST00000554131 ADGRL1O94910 1474 aa28.58■■■□□ 2.17
PSEN1-210ENST00000554131 ARHGEF12Q9NZN5 1544 aa28.58■■■□□ 2.17
PSEN1-210ENST00000554131 FGD6Q6ZV73 1430 aa28.57■■■□□ 2.16
PSEN1-210ENST00000554131 KDM6BO15054 1643 aa28.56■■■□□ 2.16
PSEN1-210ENST00000554131 FRMPD1Q5SYB0 1578 aa28.55■■■□□ 2.16
PSEN1-210ENST00000554131 ZNF644Q9H582 1327 aaPredicted RBP28.55■■■□□ 2.16
PSEN1-210ENST00000554131 CAMSAP2Q08AD1 1489 aa28.54■■■□□ 2.16
PSEN1-210ENST00000554131 RICTORQ6R327 1708 aa28.54■■■□□ 2.16
PSEN1-210ENST00000554131 PTPN23Q9H3S7 1636 aa28.54■■■□□ 2.16
PSEN1-210ENST00000554131 TCOF1Q13428 1488 aaKnown RBP28.53■■■□□ 2.16
PSEN1-210ENST00000554131 SCAPERQ9BY12 1400 aa28.52■■■□□ 2.16
PSEN1-210ENST00000554131 KIAA1107Q9UPP5 1409 aa28.52■■■□□ 2.16
PSEN1-210ENST00000554131 SYCP2Q9BX26 1530 aa28.52■■■□□ 2.16
PSEN1-210ENST00000554131 ZNF777Q9ULD5 760 aaPredicted RBP28.51■■■□□ 2.15
PSEN1-210ENST00000554131 PLEKHH2Q8IVE3 1493 aa28.51■■■□□ 2.15
PSEN1-210ENST00000554131 MBD5Q9P267 1494 aa28.5■■■□□ 2.15
PSEN1-210ENST00000554131 DENND4BO75064 1496 aaPredicted RBP28.49■■■□□ 2.15
PSEN1-210ENST00000554131 POGZQ7Z3K3 1410 aa28.48■■■□□ 2.15
PSEN1-210ENST00000554131 TRAPPC8Q9Y2L5 1435 aa28.46■■■□□ 2.15
PSEN1-210ENST00000554131 KDM5CP41229 1560 aa28.45■■■□□ 2.14
PSEN1-210ENST00000554131 ARHGEF5Q12774 1597 aa28.44■■■□□ 2.14
PSEN1-210ENST00000554131 RRBP1Q9P2E9 1410 aaKnown RBP28.43■■■□□ 2.14
PSEN1-210ENST00000554131 RAPGEF3O95398 923 aa28.43■■■□□ 2.14
PSEN1-210ENST00000554131 HNRNPMP52272 730 aaKnown RBP eCLIP28.42■■■□□ 2.14
PSEN1-210ENST00000554131 ZMYM4Q5VZL5 1548 aa28.42■■■□□ 2.14
PSEN1-210ENST00000554131 ZNF518AQ6AHZ1 1483 aa28.41■■■□□ 2.14
PSEN1-210ENST00000554131 AFAP1Q8N556 730 aa28.37■■■□□ 2.13
PSEN1-210ENST00000554131 DNMT1P26358 1616 aaKnown RBP28.36■■■□□ 2.13
PSEN1-210ENST00000554131 CCDC141Q6ZP82 1450 aa28.35■■■□□ 2.13
PSEN1-210ENST00000554131 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.35■■■□□ 2.13
PSEN1-210ENST00000554131 CROCC2H7BZ55 1655 aa28.34■■■□□ 2.13
PSEN1-210ENST00000554131 HECW2Q9P2P5 1572 aa28.33■■■□□ 2.12
PSEN1-210ENST00000554131 INO80Q9ULG1 1556 aaPredicted RBP28.33■■■□□ 2.12
PSEN1-210ENST00000554131 ABCC5O15440 1437 aa28.32■■■□□ 2.12
PSEN1-210ENST00000554131 MLH3Q9UHC1 1453 aa28.32■■■□□ 2.12
PSEN1-210ENST00000554131 KIDINS220Q9ULH0 1771 aa28.31■■■□□ 2.12
PSEN1-210ENST00000554131 DAPK1P53355 1430 aa28.3■■■□□ 2.12
PSEN1-210ENST00000554131 MAST1Q9Y2H9 1570 aa28.29■■■□□ 2.12
PSEN1-210ENST00000554131 ZFYVE16Q7Z3T8 1539 aa28.29■■■□□ 2.12
PSEN1-210ENST00000554131 MAGI2Q86UL8 1455 aa28.29■■■□□ 2.12
PSEN1-210ENST00000554131 RSPH4AQ5TD94 716 aa28.29■■■□□ 2.12
PSEN1-210ENST00000554131 FAM50AQ14320 339 aaKnown RBP28.28■■■□□ 2.12
PSEN1-210ENST00000554131 YEATS2Q9ULM3 1422 aa28.26■■■□□ 2.12
PSEN1-210ENST00000554131 ATP7AQ04656 1500 aa28.26■■■□□ 2.11
PSEN1-210ENST00000554131 ARHGEF40Q8TER5 1519 aa28.26■■■□□ 2.11
PSEN1-210ENST00000554131 SHANK2Q9UPX8 1470 aa28.26■■■□□ 2.11
PSEN1-210ENST00000554131 ABCA6Q8N139 1617 aa28.25■■■□□ 2.11
PSEN1-210ENST00000554131 RTEL1-TNFRSF6BF6WH68 1400 aa28.24■■■□□ 2.11
PSEN1-210ENST00000554131 PTPRKQ15262 1439 aa28.24■■■□□ 2.11
PSEN1-210ENST00000554131 DIP2CQ9Y2E4 1556 aa28.23■■■□□ 2.11
PSEN1-210ENST00000554131 SPAG9O60271 1321 aaKnown RBP28.22■■■□□ 2.11
PSEN1-210ENST00000554131 C9orf84Q5VXU9 1444 aa28.21■■■□□ 2.11
PSEN1-210ENST00000554131 ADGBQ8N7X0 1667 aa28.17■■■□□ 2.1
PSEN1-210ENST00000554131 PLXNC1O60486 1568 aa28.17■■■□□ 2.1
PSEN1-210ENST00000554131 SIGLEC1Q9BZZ2 1709 aa28.17■■■□□ 2.1
PSEN1-210ENST00000554131 ADGRL2O95490 1459 aa28.15■■■□□ 2.1
PSEN1-210ENST00000554131 TSPY4P0CV99 314 aa28.15■■■□□ 2.1
PSEN1-210ENST00000554131 TSPY10P0CW01 314 aa28.15■■■□□ 2.1
PSEN1-210ENST00000554131 REREQ9P2R6 1566 aa28.14■■■□□ 2.1
PSEN1-210ENST00000554131 ATP10AO60312 1499 aa28.13■■■□□ 2.09
PSEN1-210ENST00000554131 NCOA1Q15788 1441 aa28.09■■■□□ 2.09
PSEN1-210ENST00000554131 CHIC2Q9UKJ5 165 aa28.07■■■□□ 2.08
PSEN1-210ENST00000554131 MYT1LQ9UL68 1186 aa28.06■■■□□ 2.08
PSEN1-210ENST00000554131 ROCK1Q13464 1354 aa28.06■■■□□ 2.08
PSEN1-210ENST00000554131 A2MP01023 1474 aa28.05■■■□□ 2.08
PSEN1-210ENST00000554131 ITGAEP38570 1179 aa28.05■■■□□ 2.08
PSEN1-210ENST00000554131 ANKRD30AQ9BXX3 1397 aa28.03■■■□□ 2.08
PSEN1-210ENST00000554131 AGLP35573 1532 aa28.02■■■□□ 2.08
PSEN1-210ENST00000554131 DHX29Q7Z478 1369 aaKnown RBP28.01■■■□□ 2.07
PSEN1-210ENST00000554131 KIF15Q9NS87 1388 aa28.01■■■□□ 2.07
PSEN1-210ENST00000554131 DUOX2Q9NRD8 1548 aa28.01■■■□□ 2.07
PSEN1-210ENST00000554131 BCORL1Q5H9F3 1711 aa27.99■■■□□ 2.07
PSEN1-210ENST00000554131 RRP7BPQ9NSQ0 103 aa27.98■■■□□ 2.07
PSEN1-210ENST00000554131 EIF2AK4Q9P2K8 1649 aaKnown RBP27.96■■■□□ 2.07
PSEN1-210ENST00000554131 GCC2Q8IWJ2 1684 aa27.94■■■□□ 2.06
PSEN1-210ENST00000554131 ERBINQ96RT1 1412 aa27.93■■■□□ 2.06
PSEN1-210ENST00000554131 NAIPQ13075 1403 aa27.92■■■□□ 2.06
PSEN1-210ENST00000554131 HFM1A2PYH4 1435 aa27.91■■■□□ 2.06
PSEN1-210ENST00000554131 RNF17Q9BXT8 1623 aaKnown RBP27.89■■■□□ 2.05
PSEN1-210ENST00000554131 ANKRD50Q9ULJ7 1429 aa27.88■■■□□ 2.05
PSEN1-210ENST00000554131 MROH1Q8NDA8 1641 aa27.87■■■□□ 2.05
PSEN1-210ENST00000554131 DEPDC5O75140 1603 aa27.86■■■□□ 2.05
PSEN1-210ENST00000554131 ADAMTSL3P82987 1691 aa27.85■■■□□ 2.05
PSEN1-210ENST00000554131 TRIM26Q12899 539 aaPredicted RBP27.85■■■□□ 2.05
PSEN1-210ENST00000554131 ARID4BQ4LE39 1312 aaPredicted RBP27.83■■■□□ 2.05
PSEN1-210ENST00000554131 KIF3BO15066 747 aa27.81■■■□□ 2.04
PSEN1-210ENST00000554131 UNC13BO14795 1591 aa27.79■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms