RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 ABCC5O15440 1437 aa20.38■□□□□ 0.85
ACTN1-211ENST00000553882 CDK11AQ9UQ88 783 aaPredicted RBP20.38■□□□□ 0.85
ACTN1-211ENST00000553882 EIF4G2P78344 907 aaKnown RBP eCLIP20.37■□□□□ 0.85
ACTN1-211ENST00000553882 RAPGEF6Q8TEU7 1601 aa20.37■□□□□ 0.85
ACTN1-211ENST00000553882 CHMP7Q8WUX9 453 aaPredicted RBP20.36■□□□□ 0.85
ACTN1-211ENST00000553882 PRG4Q92954 1404 aaPredicted RBP20.35■□□□□ 0.85
ACTN1-211ENST00000553882 SLC4A1APQ9BWU0 796 aaKnown RBP20.35■□□□□ 0.85
ACTN1-211ENST00000553882 TSHZ2Q9NRE2 1034 aa20.35■□□□□ 0.85
ACTN1-211ENST00000553882 ROCK1Q13464 1354 aa20.34■□□□□ 0.85
ACTN1-211ENST00000553882 ERCC6Q03468 1493 aa20.33■□□□□ 0.85
ACTN1-211ENST00000553882 ZNF777Q9ULD5 760 aaPredicted RBP20.33■□□□□ 0.85
ACTN1-211ENST00000553882 DNMT1P26358 1616 aaKnown RBP20.33■□□□□ 0.84
ACTN1-211ENST00000553882 PLB1Q6P1J6 1458 aa20.33■□□□□ 0.84
ACTN1-211ENST00000553882 NEFLP07196 543 aa20.32■□□□□ 0.84
ACTN1-211ENST00000553882 ANKRD30BQ9BXX2 1392 aa20.32■□□□□ 0.84
ACTN1-211ENST00000553882 CFDP1Q9UEE9 299 aaPredicted RBP20.31■□□□□ 0.84
ACTN1-211ENST00000553882 C11orf95C9JLR9 678 aaPredicted RBP20.3■□□□□ 0.84
ACTN1-211ENST00000553882 HNRNPUQ00839 825 aaKnown RBP eCLIP20.3■□□□□ 0.84
ACTN1-211ENST00000553882 NBPF8Q3BBV2 869 aa20.3■□□□□ 0.84
ACTN1-211ENST00000553882 RPRD2Q5VT52 1461 aaKnown RBP20.27■□□□□ 0.84
ACTN1-211ENST00000553882 TROQ12816 1431 aaPredicted RBP20.27■□□□□ 0.84
ACTN1-211ENST00000553882 CEP170Q5SW79 1584 aa20.27■□□□□ 0.84
ACTN1-211ENST00000553882 CAMSAP2Q08AD1 1489 aa20.26■□□□□ 0.83
ACTN1-211ENST00000553882 MAGI1Q96QZ7 1491 aaPredicted RBP20.24■□□□□ 0.83
ACTN1-211ENST00000553882 TEX14Q8IWB6 1497 aa20.24■□□□□ 0.83
ACTN1-211ENST00000553882 JPH4Q96JJ6 628 aa20.23■□□□□ 0.83
ACTN1-211ENST00000553882 SYNJ2O15056 1496 aa20.23■□□□□ 0.83
ACTN1-211ENST00000553882 KIF14Q15058 1648 aa20.23■□□□□ 0.83
ACTN1-211ENST00000553882 CCDC184Q52MB2 194 aa20.23■□□□□ 0.83
ACTN1-211ENST00000553882 SLC24A1O60721 1099 aa20.23■□□□□ 0.83
ACTN1-211ENST00000553882 GPATCH8Q9UKJ3 1502 aaKnown RBP20.22■□□□□ 0.83
ACTN1-211ENST00000553882 CNTLNQ9NXG0 1405 aa20.22■□□□□ 0.83
ACTN1-211ENST00000553882 CCDC7Q96M83 1385 aa20.21■□□□□ 0.83
ACTN1-211ENST00000553882 NCOA1Q15788 1441 aa20.21■□□□□ 0.83
ACTN1-211ENST00000553882 PZPP20742 1482 aa20.19■□□□□ 0.82
ACTN1-211ENST00000553882 ZNF326Q5BKZ1 582 aaKnown RBP20.19■□□□□ 0.82
ACTN1-211ENST00000553882 CARMIL2Q6F5E8 1435 aa20.18■□□□□ 0.82
ACTN1-211ENST00000553882 ITSN2Q9NZM3 1697 aa20.16■□□□□ 0.82
ACTN1-211ENST00000553882 PRKRIP1Q9H875 184 aaPredicted RBP20.16■□□□□ 0.82
ACTN1-211ENST00000553882 KIF7Q2M1P5 1343 aa20.15■□□□□ 0.82
ACTN1-211ENST00000553882 IRX6P78412 446 aaPredicted RBP20.15■□□□□ 0.82
ACTN1-211ENST00000553882 PKD2Q13563 968 aa20.15■□□□□ 0.82
ACTN1-211ENST00000553882 FAM9BQ8IZU0 186 aa20.14■□□□□ 0.82
ACTN1-211ENST00000553882 PLEKHD1A6NEE1 506 aa20.13■□□□□ 0.81
ACTN1-211ENST00000553882 CNGB1Q14028 1251 aaPredicted RBP20.13■□□□□ 0.81
ACTN1-211ENST00000553882 NUP160Q12769 1436 aa20.13■□□□□ 0.81
ACTN1-211ENST00000553882 SPATA31E1Q6ZUB1 1445 aa20.12■□□□□ 0.81
ACTN1-211ENST00000553882 ANKRD30AQ9BXX3 1397 aa20.12■□□□□ 0.81
ACTN1-211ENST00000553882 POLR3GLQ9BT43 218 aa20.12■□□□□ 0.81
ACTN1-211ENST00000553882 MRS2Q9HD23 443 aa20.12■□□□□ 0.81
ACTN1-211ENST00000553882 ADGBQ8N7X0 1667 aa20.11■□□□□ 0.81
ACTN1-211ENST00000553882 MYT1Q01538 1121 aa20.1■□□□□ 0.81
ACTN1-211ENST00000553882 KIAA1107Q9UPP5 1409 aa20.1■□□□□ 0.81
ACTN1-211ENST00000553882 ADCY10Q96PN6 1610 aa20.1■□□□□ 0.81
ACTN1-211ENST00000553882 ANKRD50Q9ULJ7 1429 aa20.1■□□□□ 0.81
ACTN1-211ENST00000553882 ADGRL2O95490 1459 aa20.09■□□□□ 0.81
ACTN1-211ENST00000553882 CROCC2H7BZ55 1655 aa20.08■□□□□ 0.8
ACTN1-211ENST00000553882 ATP10BO94823 1461 aa20.06■□□□□ 0.8
ACTN1-211ENST00000553882 NUP155O75694 1391 aa20.06■□□□□ 0.8
ACTN1-211ENST00000553882 CDC42BPAQ5VT25 1732 aa20.04■□□□□ 0.8
ACTN1-211ENST00000553882 C9orf84Q5VXU9 1444 aa20.04■□□□□ 0.8
ACTN1-211ENST00000553882 USP47Q96K76 1375 aa20.04■□□□□ 0.8
ACTN1-211ENST00000553882 HNRNPMP52272 730 aaKnown RBP eCLIP20.04■□□□□ 0.8
ACTN1-211ENST00000553882 ABCA8O94911 1581 aa20.03■□□□□ 0.8
ACTN1-211ENST00000553882 MBD5Q9P267 1494 aa20.03■□□□□ 0.8
ACTN1-211ENST00000553882 TSPY4P0CV99 314 aa20.03■□□□□ 0.8
ACTN1-211ENST00000553882 TSPY10P0CW01 314 aa20.03■□□□□ 0.8
ACTN1-211ENST00000553882 ABCC10Q5T3U5 1492 aa20.02■□□□□ 0.8
ACTN1-211ENST00000553882 KDM2AQ9Y2K7 1162 aa19.99■□□□□ 0.79
ACTN1-211ENST00000553882 RBM19Q9Y4C8 960 aaKnown RBP19.99■□□□□ 0.79
ACTN1-211ENST00000553882 POLR1AO95602 1720 aaPredicted RBP19.98■□□□□ 0.79
ACTN1-211ENST00000553882 KIF15Q9NS87 1388 aa19.97■□□□□ 0.79
ACTN1-211ENST00000553882 BCORL1Q5H9F3 1711 aa19.97■□□□□ 0.79
ACTN1-211ENST00000553882 PTPRGP23470 1445 aa19.95■□□□□ 0.78
ACTN1-211ENST00000553882 SHANK2Q9UPX8 1470 aa19.95■□□□□ 0.78
ACTN1-211ENST00000553882 CARD11Q9BXL7 1154 aa19.94■□□□□ 0.78
ACTN1-211ENST00000553882 ZBED9Q6R2W3 1325 aa19.94■□□□□ 0.78
ACTN1-211ENST00000553882 DHX29Q7Z478 1369 aaKnown RBP19.94■□□□□ 0.78
ACTN1-211ENST00000553882 SENP3-EIF4A1A0A087X0R7 540 aa19.92■□□□□ 0.78
ACTN1-211ENST00000553882 DCAF11Q8TEB1 546 aa19.92■□□□□ 0.78
ACTN1-211ENST00000553882 KDM5CP41229 1560 aa19.92■□□□□ 0.78
ACTN1-211ENST00000553882 ST20-MTHFSA0A0A6YYL1 179 aa19.88■□□□□ 0.77
ACTN1-211ENST00000553882 RALGAPBQ86X10 1494 aa19.87■□□□□ 0.77
ACTN1-211ENST00000553882 UHRF1BP1Q6BDS2 1440 aa19.87■□□□□ 0.77
ACTN1-211ENST00000553882 SAMD9LQ8IVG5 1584 aa19.86■□□□□ 0.77
ACTN1-211ENST00000553882 ANP32EQ9BTT0 268 aa19.85■□□□□ 0.77
ACTN1-211ENST00000553882 CCDC141Q6ZP82 1450 aa19.85■□□□□ 0.77
ACTN1-211ENST00000553882 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.85■□□□□ 0.774e-8■□□□□ 8.4
ACTN1-211ENST00000553882 KDM5DQ9BY66 1539 aa19.85■□□□□ 0.77
ACTN1-211ENST00000553882 CDC42BPBQ9Y5S2 1711 aa19.84■□□□□ 0.77
ACTN1-211ENST00000553882 ARHGEF5Q12774 1597 aa19.84■□□□□ 0.77
ACTN1-211ENST00000553882 RGL3Q3MIN7 710 aa19.83■□□□□ 0.77
ACTN1-211ENST00000553882 PPP4R2Q9NY27 417 aa19.83■□□□□ 0.77
ACTN1-211ENST00000553882 ARHGEF12Q9NZN5 1544 aa19.83■□□□□ 0.76
ACTN1-211ENST00000553882 B4GALNT3Q6L9W6 998 aa19.82■□□□□ 0.76
ACTN1-211ENST00000553882 ARID4BQ4LE39 1312 aaPredicted RBP19.82■□□□□ 0.76
ACTN1-211ENST00000553882 FAM135AQ9P2D6 1515 aa19.81■□□□□ 0.76
ACTN1-211ENST00000553882 ROCK2O75116 1388 aaKnown RBP19.81■□□□□ 0.76
ACTN1-211ENST00000553882 SYCP2Q9BX26 1530 aa19.81■□□□□ 0.76
ACTN1-211ENST00000553882 PREX2Q70Z35 1606 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms