RNA–Protein interactions for RNA: ENST00000553660.5

CNIH1-203, Transcript of cornichon family AMPA receptor auxiliary protein 1, humanhuman

TSL 2 BASIC

Gene CNIH1, Length 785 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH1-203ENST00000553660 KDM5BQ9UGL1 1544 aa17.61■□□□□ 0.41
CNIH1-203ENST00000553660 SAMD9Q5K651 1589 aa17.57■□□□□ 0.4
CNIH1-203ENST00000553660 PLB1Q6P1J6 1458 aa17.56■□□□□ 0.4
CNIH1-203ENST00000553660 TTBK1Q5TCY1 1321 aaPredicted RBP17.56■□□□□ 0.4
CNIH1-203ENST00000553660 ABCA8O94911 1581 aa17.55■□□□□ 0.4
CNIH1-203ENST00000553660 IFNLR1Q8IU57 520 aaPredicted RBP17.54■□□□□ 0.4
CNIH1-203ENST00000553660 ZBTB47Q9UFB7 747 aaPredicted RBP17.54■□□□□ 0.4
CNIH1-203ENST00000553660 DIP2BQ9P265 1576 aa17.53■□□□□ 0.4
CNIH1-203ENST00000553660 MNX1P50219 401 aaPredicted RBP17.53■□□□□ 0.4
CNIH1-203ENST00000553660 FAM69CQ0P6D2 419 aa17.53■□□□□ 0.4
CNIH1-203ENST00000553660 KIF13AQ9H1H9 1805 aa17.52■□□□□ 0.4
CNIH1-203ENST00000553660 FARP1Q9Y4F1 1045 aaPredicted RBP17.52■□□□□ 0.4
CNIH1-203ENST00000553660 ASXL2Q76L83 1435 aa17.52■□□□□ 0.4
CNIH1-203ENST00000553660 EFCAB5A4FU69 1503 aa17.52■□□□□ 0.39
CNIH1-203ENST00000553660 KLHL34Q8N239 644 aa17.5■□□□□ 0.39
CNIH1-203ENST00000553660 GLI2P10070 1586 aa17.49■□□□□ 0.39
CNIH1-203ENST00000553660 POTEHQ6S545 545 aa17.47■□□□□ 0.39
CNIH1-203ENST00000553660 ZCCHC11Q5TAX3 1644 aaKnown RBP17.47■□□□□ 0.39
CNIH1-203ENST00000553660 UBTFP17480 764 aaKnown RBP17.46■□□□□ 0.39
CNIH1-203ENST00000553660 P3H3Q8IVL6 736 aa17.45■□□□□ 0.38
CNIH1-203ENST00000553660 WDR7Q9Y4E6 1490 aa17.44■□□□□ 0.38
CNIH1-203ENST00000553660 EPRSP07814 1512 aaKnown RBP17.43■□□□□ 0.38
CNIH1-203ENST00000553660 FHOD3Q2V2M9 1422 aa17.41■□□□□ 0.38
CNIH1-203ENST00000553660 ATP10BO94823 1461 aa17.4■□□□□ 0.38
CNIH1-203ENST00000553660 RAPGEF6Q8TEU7 1601 aa17.39■□□□□ 0.38
CNIH1-203ENST00000553660 FMN1Q68DA7 1419 aa17.37■□□□□ 0.37
CNIH1-203ENST00000553660 NUP153P49790 1475 aaKnown RBP17.37■□□□□ 0.37
CNIH1-203ENST00000553660 ARHGAP35Q9NRY4 1499 aa17.37■□□□□ 0.37
CNIH1-203ENST00000553660 SPOCK2Q92563 424 aa17.36■□□□□ 0.37
CNIH1-203ENST00000553660 RANGAP1P46060 587 aaPredicted RBP17.34■□□□□ 0.37
CNIH1-203ENST00000553660 MAP3K4Q9Y6R4 1608 aa17.34■□□□□ 0.37
CNIH1-203ENST00000553660 TEX14Q8IWB6 1497 aa17.32■□□□□ 0.36
CNIH1-203ENST00000553660 MAGI3Q5TCQ9 1506 aa17.31■□□□□ 0.36
CNIH1-203ENST00000553660 NUBP1P53384 320 aa17.3■□□□□ 0.36
CNIH1-203ENST00000553660 PPRC1Q5VV67 1664 aaKnown RBP17.29■□□□□ 0.36
CNIH1-203ENST00000553660 CFAP43Q8NDM7 1665 aa17.28■□□□□ 0.36
CNIH1-203ENST00000553660 CD109Q6YHK3 1445 aa17.28■□□□□ 0.36
CNIH1-203ENST00000553660 PLEKHD1A6NEE1 506 aa17.26■□□□□ 0.35
CNIH1-203ENST00000553660 KCNH8Q96L42 1107 aa17.26■□□□□ 0.35
CNIH1-203ENST00000553660 KDM6BO15054 1643 aa17.25■□□□□ 0.35
CNIH1-203ENST00000553660 TSPOAP1O95153 1857 aa17.24■□□□□ 0.35
CNIH1-203ENST00000553660 PHLDB1Q86UU1 1377 aa17.24■□□□□ 0.35
CNIH1-203ENST00000553660 ABCA9Q8IUA7 1624 aa17.24■□□□□ 0.35
CNIH1-203ENST00000553660 ARID3CA6NKF2 412 aa17.23■□□□□ 0.35
CNIH1-203ENST00000553660 CLIP1P30622 1438 aa17.22■□□□□ 0.35
CNIH1-203ENST00000553660 HECW1Q76N89 1606 aa17.22■□□□□ 0.35
CNIH1-203ENST00000553660 C19orf67A6NJJ6 358 aa17.22■□□□□ 0.35
CNIH1-203ENST00000553660 RASEFQ8IZ41 740 aa17.22■□□□□ 0.35
CNIH1-203ENST00000553660 CASKIN1Q8WXD9 1431 aa17.21■□□□□ 0.34
CNIH1-203ENST00000553660 CDK11AQ9UQ88 783 aaPredicted RBP17.2■□□□□ 0.34
CNIH1-203ENST00000553660 HAX1O00165 279 aa17.19■□□□□ 0.34
CNIH1-203ENST00000553660 CD44P16070 742 aaKnown RBP17.18■□□□□ 0.34
CNIH1-203ENST00000553660 COL17A1Q9UMD9 1497 aaPredicted RBP17.18■□□□□ 0.34
CNIH1-203ENST00000553660 CDK13Q14004 1512 aaKnown RBP17.16■□□□□ 0.34
CNIH1-203ENST00000553660 FAM212AQ96EL1 285 aa17.16■□□□□ 0.34
CNIH1-203ENST00000553660 CCDC18Q5T9S5 1454 aa17.16■□□□□ 0.34
CNIH1-203ENST00000553660 NEO1Q92859 1461 aa17.16■□□□□ 0.34
CNIH1-203ENST00000553660 ARAP3Q8WWN8 1544 aa17.16■□□□□ 0.34
CNIH1-203ENST00000553660 PAK3O75914 559 aaPredicted RBP17.15■□□□□ 0.34
CNIH1-203ENST00000553660 FYCO1Q9BQS8 1478 aa17.15■□□□□ 0.34
CNIH1-203ENST00000553660 DCAF8Q5TAQ9 597 aa17.13■□□□□ 0.33
CNIH1-203ENST00000553660 TSPYL2Q9H2G4 693 aaPredicted RBP17.13■□□□□ 0.33
CNIH1-203ENST00000553660 GSE1Q14687 1217 aa17.12■□□□□ 0.33
CNIH1-203ENST00000553660 TROQ12816 1431 aaPredicted RBP17.12■□□□□ 0.33
CNIH1-203ENST00000553660 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.11■□□□□ 0.33
CNIH1-203ENST00000553660 ATP1B4Q9UN42 357 aaPredicted RBP17.11■□□□□ 0.33
CNIH1-203ENST00000553660 CEP162Q5TB80 1403 aa17.11■□□□□ 0.33
CNIH1-203ENST00000553660 PCF11O94913 1555 aaKnown RBP17.1■□□□□ 0.33
CNIH1-203ENST00000553660 CIZ1Q9ULV3 898 aaPredicted RBP17.09■□□□□ 0.33
CNIH1-203ENST00000553660 ZRANB1Q9UGI0 708 aa17.08■□□□□ 0.32
CNIH1-203ENST00000553660 PLCH2O75038 1416 aa17.07■□□□□ 0.32
CNIH1-203ENST00000553660 TTC37Q6PGP7 1564 aa17.05■□□□□ 0.32
CNIH1-203ENST00000553660 CFAP74Q9C0B2 1584 aa17.05■□□□□ 0.32
CNIH1-203ENST00000553660 FANCAO15360 1455 aa17.05■□□□□ 0.32
CNIH1-203ENST00000553660 LRRIQ1Q96JM4 1722 aa17.04■□□□□ 0.32
CNIH1-203ENST00000553660 KIF14Q15058 1648 aa17.04■□□□□ 0.32
CNIH1-203ENST00000553660 EVX2Q03828 476 aa17.03■□□□□ 0.32
CNIH1-203ENST00000553660 AKNAQ7Z591 1439 aa17.03■□□□□ 0.32
CNIH1-203ENST00000553660 LOC105371045A0A1W2PR82 267 aa17.02■□□□□ 0.32
CNIH1-203ENST00000553660 CCDC61Q9Y6R9 512 aa17.02■□□□□ 0.32
CNIH1-203ENST00000553660 EFCAB2Q5VUJ9 269 aa17■□□□□ 0.31
CNIH1-203ENST00000553660 DENND4BO75064 1496 aaPredicted RBP16.99■□□□□ 0.31
CNIH1-203ENST00000553660 AMER1Q5JTC6 1135 aaPredicted RBP16.99■□□□□ 0.31
CNIH1-203ENST00000553660 RAPGEF3O95398 923 aa16.97■□□□□ 0.31
CNIH1-203ENST00000553660 ZNF579Q8NAF0 562 aaKnown RBP16.97■□□□□ 0.31
CNIH1-203ENST00000553660 MYO5CQ9NQX4 1742 aa16.96■□□□□ 0.3
CNIH1-203ENST00000553660 FRMPD1Q5SYB0 1578 aa16.95■□□□□ 0.3
CNIH1-203ENST00000553660 MAGI2Q86UL8 1455 aa16.95■□□□□ 0.3
CNIH1-203ENST00000553660 PKD2Q13563 968 aa16.95■□□□□ 0.3
CNIH1-203ENST00000553660 VPS8Q8N3P4 1428 aa16.95■□□□□ 0.3
CNIH1-203ENST00000553660 ADGRL1O94910 1474 aa16.94■□□□□ 0.3
CNIH1-203ENST00000553660 KDM4FA0A1W2PPD8 638 aa16.94■□□□□ 0.3
CNIH1-203ENST00000553660 ZMYM4Q5VZL5 1548 aa16.94■□□□□ 0.3
CNIH1-203ENST00000553660 POGZQ7Z3K3 1410 aa16.92■□□□□ 0.3
CNIH1-203ENST00000553660 SCAPERQ9BY12 1400 aa16.92■□□□□ 0.3
CNIH1-203ENST00000553660 RICTORQ6R327 1708 aa16.92■□□□□ 0.3
CNIH1-203ENST00000553660 MTUS2Q5JR59 1369 aa16.91■□□□□ 0.3
CNIH1-203ENST00000553660 PHF12Q96QT6 1004 aa16.91■□□□□ 0.3
CNIH1-203ENST00000553660 RTN4Q9NQC3 1192 aaKnown RBP16.91■□□□□ 0.3
CNIH1-203ENST00000553660 ARHGAP5Q13017 1502 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms