RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 EIF5BO60841 1220 aaKnown RBP6.2□□□□□ -1.42
RDH11-204ENST00000553578 SYNJ1O43426 1573 aa6.2□□□□□ -1.42
RDH11-204ENST00000553578 STK25O00506 426 aa6.2□□□□□ -1.42
RDH11-204ENST00000553578 TIE1P35590 1138 aa6.2□□□□□ -1.42
RDH11-204ENST00000553578 CHGAP10645 457 aaKnown RBP6.19□□□□□ -1.42
RDH11-204ENST00000553578 ERICH3Q5RHP9 1530 aa6.18□□□□□ -1.42
RDH11-204ENST00000553578 STK24Q9Y6E0 443 aa6.18□□□□□ -1.42
RDH11-204ENST00000553578 RNF25Q96BH1 459 aaPredicted RBP6.18□□□□□ -1.42
RDH11-204ENST00000553578 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.17□□□□□ -1.42
RDH11-204ENST00000553578 ZFP91Q96JP5 570 aaPredicted RBP6.17□□□□□ -1.42
RDH11-204ENST00000553578 MKRN3Q13064 507 aaKnown RBP6.16□□□□□ -1.42
RDH11-204ENST00000553578 BCL11BQ9C0K0 894 aaPredicted RBP6.16□□□□□ -1.42
RDH11-204ENST00000553578 ATP1B4Q9UN42 357 aaPredicted RBP6.16□□□□□ -1.42
RDH11-204ENST00000553578 BMP2KQ9NSY1 1161 aaPredicted RBP6.15□□□□□ -1.42
RDH11-204ENST00000553578 TRPC6Q9Y210 931 aa6.15□□□□□ -1.42
RDH11-204ENST00000553578 WRNQ14191 1432 aaPredicted RBP eCLIP6.15□□□□□ -1.42
RDH11-204ENST00000553578 TTLL13PA6NNM8 815 aa6.15□□□□□ -1.43
RDH11-204ENST00000553578 CABP2Q9NPB3 220 aa6.15□□□□□ -1.43
RDH11-204ENST00000553578 CUX1P39880 1505 aa6.14□□□□□ -1.43
RDH11-204ENST00000553578 NPM2Q86SE8 214 aaKnown RBP6.14□□□□□ -1.43
RDH11-204ENST00000553578 TRIM35Q9UPQ4 493 aa6.14□□□□□ -1.43
RDH11-204ENST00000553578 ATMINO43313 823 aaPredicted RBP6.13□□□□□ -1.43
RDH11-204ENST00000553578 ABCC8Q09428 1581 aa6.13□□□□□ -1.43
RDH11-204ENST00000553578 SEC24BO95487 1268 aa6.12□□□□□ -1.43
RDH11-204ENST00000553578 DNMBPQ6XZF7 1577 aa6.12□□□□□ -1.43
RDH11-204ENST00000553578 ATN1P54259 1190 aaPredicted RBP6.12□□□□□ -1.43
RDH11-204ENST00000553578 ASTLQ6HA08 431 aaPredicted RBP6.11□□□□□ -1.43
RDH11-204ENST00000553578 SLC39A7Q92504 469 aa6.11□□□□□ -1.43
RDH11-204ENST00000553578 PRXQ9BXM0 1461 aa6.11□□□□□ -1.43
RDH11-204ENST00000553578 HS6ST3Q8IZP7 471 aa6.11□□□□□ -1.43
RDH11-204ENST00000553578 VSIG10Q8N0Z9 540 aa6.1□□□□□ -1.43
RDH11-204ENST00000553578 CADPSQ9ULU8 1353 aa6.1□□□□□ -1.43
RDH11-204ENST00000553578 PLCG2P16885 1265 aa6.09□□□□□ -1.43
RDH11-204ENST00000553578 ABCA5Q8WWZ7 1642 aa6.09□□□□□ -1.43
RDH11-204ENST00000553578 C7P10643 843 aa6.09□□□□□ -1.43
RDH11-204ENST00000553578 G3V3G9 751 aa6.09□□□□□ -1.43
RDH11-204ENST00000553578 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.09□□□□□ -1.44
RDH11-204ENST00000553578 EFCAB3Q8N7B9 438 aa6.08□□□□□ -1.44
RDH11-204ENST00000553578 RYDENQ9NUL5 291 aaKnown RBP6.08□□□□□ -1.44
RDH11-204ENST00000553578 IER5LQ5T953 404 aa6.08□□□□□ -1.44
RDH11-204ENST00000553578 CUL7Q14999 1698 aa6.08□□□□□ -1.44
RDH11-204ENST00000553578 METRNQ9UJH8 293 aa6.08□□□□□ -1.44
RDH11-204ENST00000553578 ABCA10Q8WWZ4 1543 aa6.08□□□□□ -1.44
RDH11-204ENST00000553578 TNIKQ9UKE5 1360 aa6.07□□□□□ -1.44
RDH11-204ENST00000553578 SOX12O15370 315 aa6.07□□□□□ -1.44
RDH11-204ENST00000553578 NLRP6P59044 892 aa6.07□□□□□ -1.44
RDH11-204ENST00000553578 TARBP1Q13395 1621 aaKnown RBP6.06□□□□□ -1.44
RDH11-204ENST00000553578 POLR3GLQ9BT43 218 aa6.06□□□□□ -1.44
RDH11-204ENST00000553578 MAP3K1Q13233 1512 aa6.06□□□□□ -1.44
RDH11-204ENST00000553578 POTEIP0CG38 1075 aa6.06□□□□□ -1.44
RDH11-204ENST00000553578 TSHZ2Q9NRE2 1034 aa6.06□□□□□ -1.44
RDH11-204ENST00000553578 CEP164Q9UPV0 1460 aa6.05□□□□□ -1.44
RDH11-204ENST00000553578 BBXQ8WY36 941 aaPredicted RBP6.05□□□□□ -1.44
RDH11-204ENST00000553578 SPRYD3Q8NCJ5 442 aa6.05□□□□□ -1.44
RDH11-204ENST00000553578 OCEL1Q9H607 264 aa6.05□□□□□ -1.44
RDH11-204ENST00000553578 WDR62O43379 1518 aa6.04□□□□□ -1.44
RDH11-204ENST00000553578 KIF21AQ7Z4S6 1674 aa6.04□□□□□ -1.44
RDH11-204ENST00000553578 GOLGA3Q08378 1498 aa6.03□□□□□ -1.44
RDH11-204ENST00000553578 PHF8Q9UPP1 1060 aa6.02□□□□□ -1.44
RDH11-204ENST00000553578 KDM2AQ9Y2K7 1162 aa6.02□□□□□ -1.44
RDH11-204ENST00000553578 TOPBP1Q92547 1522 aa6.02□□□□□ -1.45
RDH11-204ENST00000553578 L3MBTL3Q96JM7 780 aaPredicted RBP6.02□□□□□ -1.45
RDH11-204ENST00000553578 FANCD2Q9BXW9 1451 aa6.01□□□□□ -1.45
RDH11-204ENST00000553578 CTTNBP2Q8WZ74 1663 aa6.01□□□□□ -1.45
RDH11-204ENST00000553578 THOC2Q8NI27 1593 aaKnown RBP6.01□□□□□ -1.45
RDH11-204ENST00000553578 PCGF6Q9BYE7 350 aa6.01□□□□□ -1.45
RDH11-204ENST00000553578 SOGA1O94964 1423 aa6.01□□□□□ -1.45
RDH11-204ENST00000553578 ANP32EQ9BTT0 268 aa6□□□□□ -1.45
RDH11-204ENST00000553578 URB2Q14146 1524 aaKnown RBP5.99□□□□□ -1.45
RDH11-204ENST00000553578 SAMD9Q5K651 1589 aa5.99□□□□□ -1.45
RDH11-204ENST00000553578 IRX5P78411 483 aaPredicted RBP5.99□□□□□ -1.45
RDH11-204ENST00000553578 NEUROD2Q15784 382 aa5.99□□□□□ -1.45
RDH11-204ENST00000553578 TMEM132AQ24JP5 1023 aa5.99□□□□□ -1.45
RDH11-204ENST00000553578 ACIN1Q9UKV3 1341 aaKnown RBP5.99□□□□□ -1.45
RDH11-204ENST00000553578 RUSC2Q8N2Y8 1516 aa5.99□□□□□ -1.45
RDH11-204ENST00000553578 COLQQ9Y215 455 aaPredicted RBP5.98□□□□□ -1.45
RDH11-204ENST00000553578 PBRM1Q86U86 1689 aa5.98□□□□□ -1.45
RDH11-204ENST00000553578 MFRPQ9BY79 579 aa5.98□□□□□ -1.45
RDH11-204ENST00000553578 DNAJC5Q9H3Z4 198 aa5.98□□□□□ -1.45
RDH11-204ENST00000553578 C3orf67Q6ZVT6 689 aa5.98□□□□□ -1.45
RDH11-204ENST00000553578 EFCAB5A4FU69 1503 aa5.97□□□□□ -1.45
RDH11-204ENST00000553578 AQRO60306 1485 aaKnown RBP eCLIP5.97□□□□□ -1.458e-7■■■■■ 28.7
RDH11-204ENST00000553578 POLA1P09884 1462 aaPredicted RBP5.97□□□□□ -1.45
RDH11-204ENST00000553578 MAMSTRQ6ZN01 415 aa5.97□□□□□ -1.45
RDH11-204ENST00000553578 FGD5Q6ZNL6 1462 aa5.97□□□□□ -1.45
RDH11-204ENST00000553578 SCUBE2Q9NQ36 999 aa5.97□□□□□ -1.45
RDH11-204ENST00000553578 KIF27Q86VH2 1401 aa5.97□□□□□ -1.45
RDH11-204ENST00000553578 ANO8Q9HCE9 1232 aaPredicted RBP5.96□□□□□ -1.45
RDH11-204ENST00000553578 CFAP43Q8NDM7 1665 aa5.96□□□□□ -1.46
RDH11-204ENST00000553578 PDS5BQ9NTI5 1447 aa5.96□□□□□ -1.46
RDH11-204ENST00000553578 NKX1-1Q15270 411 aaPredicted RBP5.96□□□□□ -1.46
RDH11-204ENST00000553578 BOLA1Q9Y3E2 137 aa5.96□□□□□ -1.46
RDH11-204ENST00000553578 PDCD7Q8N8D1 485 aaKnown RBP5.95□□□□□ -1.46
RDH11-204ENST00000553578 DPY19L2Q6NUT2 758 aa5.95□□□□□ -1.46
RDH11-204ENST00000553578 FBXO22Q8NEZ5 403 aa5.95□□□□□ -1.46
RDH11-204ENST00000553578 UBTFP17480 764 aaKnown RBP5.94□□□□□ -1.46
RDH11-204ENST00000553578 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.94□□□□□ -1.46
RDH11-204ENST00000553578 MRC2Q9UBG0 1479 aa5.94□□□□□ -1.46
RDH11-204ENST00000553578 IGF1RP08069 1367 aa5.94□□□□□ -1.46
RDH11-204ENST00000553578 NEUROD1Q13562 356 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms