RNA–Protein interactions for RNA: ENST00000553071.1

ITGA5-213, Transcript of integrin subunit alpha 5, humanhuman

TSL 1 (best)

Gene ITGA5, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA5-213ENST00000553071 MYOM3Q5VTT5 1437 aa26.47■■□□□ 1.83
ITGA5-213ENST00000553071 MIA2Q96PC5 1412 aa26.47■■□□□ 1.83
ITGA5-213ENST00000553071 TSPOAP1O95153 1857 aa26.47■■□□□ 1.83
ITGA5-213ENST00000553071 CFAP74Q9C0B2 1584 aa26.46■■□□□ 1.83
ITGA5-213ENST00000553071 ZNF777Q9ULD5 760 aaPredicted RBP26.45■■□□□ 1.82
ITGA5-213ENST00000553071 AKNAQ7Z591 1439 aa26.45■■□□□ 1.82
ITGA5-213ENST00000553071 PREX2Q70Z35 1606 aa26.44■■□□□ 1.82
ITGA5-213ENST00000553071 ITSN2Q9NZM3 1697 aa26.44■■□□□ 1.82
ITGA5-213ENST00000553071 PLEKHH2Q8IVE3 1493 aa26.42■■□□□ 1.82
ITGA5-213ENST00000553071 PPRC1Q5VV67 1664 aaKnown RBP26.41■■□□□ 1.82
ITGA5-213ENST00000553071 CDC42BPAQ5VT25 1732 aa26.41■■□□□ 1.82
ITGA5-213ENST00000553071 RSPH4AQ5TD94 716 aa26.4■■□□□ 1.82
ITGA5-213ENST00000553071 CDC42BPBQ9Y5S2 1711 aa26.38■■□□□ 1.81
ITGA5-213ENST00000553071 KIAA1107Q9UPP5 1409 aa26.38■■□□□ 1.81
ITGA5-213ENST00000553071 ADGRL1O94910 1474 aa26.36■■□□□ 1.81
ITGA5-213ENST00000553071 SCAPERQ9BY12 1400 aa26.36■■□□□ 1.81
ITGA5-213ENST00000553071 FGD6Q6ZV73 1430 aa26.34■■□□□ 1.81
ITGA5-213ENST00000553071 DENND4BO75064 1496 aaPredicted RBP26.33■■□□□ 1.81
ITGA5-213ENST00000553071 ZNF644Q9H582 1327 aaPredicted RBP26.3■■□□□ 1.8
ITGA5-213ENST00000553071 HNRNPMP52272 730 aaKnown RBP eCLIP26.29■■□□□ 1.8
ITGA5-213ENST00000553071 CAMSAP2Q08AD1 1489 aa26.27■■□□□ 1.8
ITGA5-213ENST00000553071 KDM6BO15054 1643 aa26.26■■□□□ 1.79
ITGA5-213ENST00000553071 SAMD9LQ8IVG5 1584 aa26.26■■□□□ 1.79
ITGA5-213ENST00000553071 ABCC1P33527 1531 aa26.26■■□□□ 1.79
ITGA5-213ENST00000553071 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.26■■□□□ 1.797e-7■□□□□ 10.7
ITGA5-213ENST00000553071 RAPGEF3O95398 923 aa26.26■■□□□ 1.79
ITGA5-213ENST00000553071 ZNF518AQ6AHZ1 1483 aa26.25■■□□□ 1.79
ITGA5-213ENST00000553071 TSPY4P0CV99 314 aa26.25■■□□□ 1.79
ITGA5-213ENST00000553071 TSPY10P0CW01 314 aa26.25■■□□□ 1.79
ITGA5-213ENST00000553071 FAM50AQ14320 339 aaKnown RBP26.25■■□□□ 1.79
ITGA5-213ENST00000553071 TCOF1Q13428 1488 aaKnown RBP26.24■■□□□ 1.79
ITGA5-213ENST00000553071 COL17A1Q9UMD9 1497 aaPredicted RBP26.23■■□□□ 1.79
ITGA5-213ENST00000553071 POGZQ7Z3K3 1410 aa26.23■■□□□ 1.79
ITGA5-213ENST00000553071 PTPN23Q9H3S7 1636 aa26.23■■□□□ 1.79
ITGA5-213ENST00000553071 AFAP1Q8N556 730 aa26.22■■□□□ 1.79
ITGA5-213ENST00000553071 MBD5Q9P267 1494 aa26.21■■□□□ 1.79
ITGA5-213ENST00000553071 RRBP1Q9P2E9 1410 aaKnown RBP26.21■■□□□ 1.79
ITGA5-213ENST00000553071 SYCP2Q9BX26 1530 aa26.2■■□□□ 1.79
ITGA5-213ENST00000553071 ARHGEF12Q9NZN5 1544 aa26.2■■□□□ 1.79
ITGA5-213ENST00000553071 TRAPPC8Q9Y2L5 1435 aa26.19■■□□□ 1.78
ITGA5-213ENST00000553071 SPAG9O60271 1321 aaKnown RBP26.18■■□□□ 1.78
ITGA5-213ENST00000553071 MYT1LQ9UL68 1186 aa26.18■■□□□ 1.78
ITGA5-213ENST00000553071 MAGI2Q86UL8 1455 aa26.17■■□□□ 1.78
ITGA5-213ENST00000553071 CCDC141Q6ZP82 1450 aa26.17■■□□□ 1.78
ITGA5-213ENST00000553071 ARHGEF5Q12774 1597 aa26.16■■□□□ 1.78
ITGA5-213ENST00000553071 MLH3Q9UHC1 1453 aa26.12■■□□□ 1.77
ITGA5-213ENST00000553071 RTEL1-TNFRSF6BF6WH68 1400 aa26.12■■□□□ 1.77
ITGA5-213ENST00000553071 RICTORQ6R327 1708 aa26.11■■□□□ 1.77
ITGA5-213ENST00000553071 KDM5CP41229 1560 aa26.11■■□□□ 1.77
ITGA5-213ENST00000553071 ZMYM4Q5VZL5 1548 aa26.1■■□□□ 1.77
ITGA5-213ENST00000553071 ABCC5O15440 1437 aa26.08■■□□□ 1.77
ITGA5-213ENST00000553071 DAPK1P53355 1430 aa26.08■■□□□ 1.77
ITGA5-213ENST00000553071 FRMPD1Q5SYB0 1578 aa26.07■■□□□ 1.76
ITGA5-213ENST00000553071 SHANK2Q9UPX8 1470 aa26.05■■□□□ 1.76
ITGA5-213ENST00000553071 DNMT1P26358 1616 aaKnown RBP26.04■■□□□ 1.76
ITGA5-213ENST00000553071 C9orf84Q5VXU9 1444 aa26.04■■□□□ 1.76
ITGA5-213ENST00000553071 HECW2Q9P2P5 1572 aa26.03■■□□□ 1.76
ITGA5-213ENST00000553071 ZFYVE16Q7Z3T8 1539 aa26.02■■□□□ 1.76
ITGA5-213ENST00000553071 ITGAEP38570 1179 aa26.01■■□□□ 1.75
ITGA5-213ENST00000553071 ANKRD30AQ9BXX3 1397 aa26.01■■□□□ 1.75
ITGA5-213ENST00000553071 MAST1Q9Y2H9 1570 aa25.99■■□□□ 1.75
ITGA5-213ENST00000553071 ATP7AQ04656 1500 aa25.99■■□□□ 1.75
ITGA5-213ENST00000553071 ATP10AO60312 1499 aa25.98■■□□□ 1.75
ITGA5-213ENST00000553071 CHIC2Q9UKJ5 165 aa25.98■■□□□ 1.75
ITGA5-213ENST00000553071 ROCK1Q13464 1354 aa25.96■■□□□ 1.75
ITGA5-213ENST00000553071 YEATS2Q9ULM3 1422 aa25.96■■□□□ 1.75
ITGA5-213ENST00000553071 INO80Q9ULG1 1556 aaPredicted RBP25.95■■□□□ 1.75
ITGA5-213ENST00000553071 ARHGEF40Q8TER5 1519 aa25.93■■□□□ 1.74
ITGA5-213ENST00000553071 KIDINS220Q9ULH0 1771 aa25.93■■□□□ 1.74
ITGA5-213ENST00000553071 NCOA1Q15788 1441 aa25.93■■□□□ 1.74
ITGA5-213ENST00000553071 ADGRL2O95490 1459 aa25.92■■□□□ 1.74
ITGA5-213ENST00000553071 TRIM26Q12899 539 aaPredicted RBP25.92■■□□□ 1.74
ITGA5-213ENST00000553071 RRP7BPQ9NSQ0 103 aa25.92■■□□□ 1.74
ITGA5-213ENST00000553071 DHX29Q7Z478 1369 aaKnown RBP25.92■■□□□ 1.74
ITGA5-213ENST00000553071 CROCC2H7BZ55 1655 aa25.9■■□□□ 1.74
ITGA5-213ENST00000553071 PTPRKQ15262 1439 aa25.9■■□□□ 1.74
ITGA5-213ENST00000553071 KIF15Q9NS87 1388 aa25.9■■□□□ 1.74
ITGA5-213ENST00000553071 A2MP01023 1474 aa25.89■■□□□ 1.73
ITGA5-213ENST00000553071 ARID4BQ4LE39 1312 aaPredicted RBP25.88■■□□□ 1.73
ITGA5-213ENST00000553071 DIP2CQ9Y2E4 1556 aa25.88■■□□□ 1.73
ITGA5-213ENST00000553071 PLXNC1O60486 1568 aa25.87■■□□□ 1.73
ITGA5-213ENST00000553071 REREQ9P2R6 1566 aa25.87■■□□□ 1.73
ITGA5-213ENST00000553071 DUOX2Q9NRD8 1548 aa25.85■■□□□ 1.73
ITGA5-213ENST00000553071 ABCA6Q8N139 1617 aa25.85■■□□□ 1.73
ITGA5-213ENST00000553071 ADGBQ8N7X0 1667 aa25.84■■□□□ 1.73
ITGA5-213ENST00000553071 AGLP35573 1532 aa25.82■■□□□ 1.72
ITGA5-213ENST00000553071 ACIN1Q9UKV3 1341 aaKnown RBP25.81■■□□□ 1.72
ITGA5-213ENST00000553071 ERBINQ96RT1 1412 aa25.8■■□□□ 1.72
ITGA5-213ENST00000553071 PPP6R1Q9UPN7 881 aa25.8■■□□□ 1.72
ITGA5-213ENST00000553071 KIF3BO15066 747 aa25.79■■□□□ 1.72
ITGA5-213ENST00000553071 ANKRD50Q9ULJ7 1429 aa25.79■■□□□ 1.72
ITGA5-213ENST00000553071 HFM1A2PYH4 1435 aa25.77■■□□□ 1.72
ITGA5-213ENST00000553071 NAIPQ13075 1403 aa25.72■■□□□ 1.71
ITGA5-213ENST00000553071 GGT6Q6P531 493 aa25.72■■□□□ 1.71
ITGA5-213ENST00000553071 ESF1Q9H501 851 aaKnown RBP25.72■■□□□ 1.71
ITGA5-213ENST00000553071 EIF2AK4Q9P2K8 1649 aaKnown RBP25.7■■□□□ 1.7
ITGA5-213ENST00000553071 MLECQ14165 292 aa25.69■■□□□ 1.7
ITGA5-213ENST00000553071 HRCP23327 699 aa25.67■■□□□ 1.7
ITGA5-213ENST00000553071 SETD5Q9C0A6 1442 aa25.67■■□□□ 1.7
ITGA5-213ENST00000553071 KANK1Q14678 1352 aa25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms