RNA–Protein interactions for RNA: ENST00000551242.5

ERBB3-219, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,755 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-219ENST00000551242 POLR3GLQ9BT43 218 aa16.45■□□□□ 0.22
ERBB3-219ENST00000551242 MPHOSPH9Q99550 1183 aa16.42■□□□□ 0.22
ERBB3-219ENST00000551242 BRPF3Q9ULD4 1205 aa16.42■□□□□ 0.22
ERBB3-219ENST00000551242 MYOM3Q5VTT5 1437 aa16.41■□□□□ 0.22
ERBB3-219ENST00000551242 PDE4AP27815 886 aa16.41■□□□□ 0.22
ERBB3-219ENST00000551242 EXOC6Q8TAG9 804 aa16.39■□□□□ 0.21
ERBB3-219ENST00000551242 USP35Q9P2H5 1018 aa16.39■□□□□ 0.21
ERBB3-219ENST00000551242 TOPBP1Q92547 1522 aa16.39■□□□□ 0.21
ERBB3-219ENST00000551242 TDRD9Q8NDG6 1382 aaKnown RBP16.39■□□□□ 0.21
ERBB3-219ENST00000551242 WASHC2CQ9Y4E1 1318 aa16.39■□□□□ 0.21
ERBB3-219ENST00000551242 POLA1P09884 1462 aaPredicted RBP16.38■□□□□ 0.21
ERBB3-219ENST00000551242 KDM6BO15054 1643 aa16.37■□□□□ 0.21
ERBB3-219ENST00000551242 TCERG1O14776 1098 aaKnown RBP16.36■□□□□ 0.21
ERBB3-219ENST00000551242 DHX29Q7Z478 1369 aaKnown RBP16.36■□□□□ 0.21
ERBB3-219ENST00000551242 SNAPC4Q5SXM2 1469 aa16.36■□□□□ 0.21
ERBB3-219ENST00000551242 BACH2Q9BYV9 841 aa16.36■□□□□ 0.21
ERBB3-219ENST00000551242 EFCAB5A4FU69 1503 aa16.36■□□□□ 0.21
ERBB3-219ENST00000551242 SPATA31E1Q6ZUB1 1445 aa16.35■□□□□ 0.21
ERBB3-219ENST00000551242 PNISRQ8TF01 805 aaKnown RBP16.34■□□□□ 0.21
ERBB3-219ENST00000551242 PPM1GO15355 546 aaPredicted RBP16.34■□□□□ 0.21
ERBB3-219ENST00000551242 SKAP1Q86WV1 359 aa16.34■□□□□ 0.21
ERBB3-219ENST00000551242 URB2Q14146 1524 aaKnown RBP16.33■□□□□ 0.21
ERBB3-219ENST00000551242 DNMBPQ6XZF7 1577 aa16.33■□□□□ 0.21
ERBB3-219ENST00000551242 HECW1Q76N89 1606 aa16.33■□□□□ 0.2
ERBB3-219ENST00000551242 EIF5BO60841 1220 aaKnown RBP16.33■□□□□ 0.2
ERBB3-219ENST00000551242 RRP1P56182 461 aaKnown RBP16.33■□□□□ 0.2
ERBB3-219ENST00000551242 TMC1Q8TDI8 760 aa16.32■□□□□ 0.2
ERBB3-219ENST00000551242 UBE2Q2Q8WVN8 375 aa16.32■□□□□ 0.2
ERBB3-219ENST00000551242 PDS5BQ9NTI5 1447 aa16.31■□□□□ 0.2
ERBB3-219ENST00000551242 GSE1Q14687 1217 aa16.3■□□□□ 0.2
ERBB3-219ENST00000551242 LRRIQ1Q96JM4 1722 aa16.29■□□□□ 0.2
ERBB3-219ENST00000551242 SLC4A3P48751 1232 aa16.29■□□□□ 0.2
ERBB3-219ENST00000551242 ZNF326Q5BKZ1 582 aaKnown RBP16.29■□□□□ 0.2
ERBB3-219ENST00000551242 LAMC3Q9Y6N6 1575 aa16.29■□□□□ 0.2
ERBB3-219ENST00000551242 ABCA5Q8WWZ7 1642 aa16.29■□□□□ 0.2
ERBB3-219ENST00000551242 ANKRD30BQ9BXX2 1392 aa16.28■□□□□ 0.2
ERBB3-219ENST00000551242 TEX14Q8IWB6 1497 aa16.28■□□□□ 0.2
ERBB3-219ENST00000551242 SUPT6HQ7KZ85 1726 aaKnown RBP16.27■□□□□ 0.2
ERBB3-219ENST00000551242 RCAN3Q9UKA8 241 aa16.27■□□□□ 0.2
ERBB3-219ENST00000551242 RPRD2Q5VT52 1461 aaKnown RBP16.27■□□□□ 0.19
ERBB3-219ENST00000551242 NFKBIBQ15653 356 aa16.26■□□□□ 0.19
ERBB3-219ENST00000551242 GCC2Q8IWJ2 1684 aa16.26■□□□□ 0.19
ERBB3-219ENST00000551242 MS4A1P11836 297 aa16.26■□□□□ 0.19
ERBB3-219ENST00000551242 FRAT1Q92837 279 aaPredicted RBP16.26■□□□□ 0.19
ERBB3-219ENST00000551242 ABCA10Q8WWZ4 1543 aa16.25■□□□□ 0.19
ERBB3-219ENST00000551242 POLR1AO95602 1720 aaPredicted RBP16.24■□□□□ 0.19
ERBB3-219ENST00000551242 UGGT2Q9NYU1 1516 aa16.24■□□□□ 0.19
ERBB3-219ENST00000551242 KIF21AQ7Z4S6 1674 aa16.23■□□□□ 0.19
ERBB3-219ENST00000551242 SLC4A1APQ9BWU0 796 aaKnown RBP16.23■□□□□ 0.19
ERBB3-219ENST00000551242 MAGI3Q5TCQ9 1506 aa16.23■□□□□ 0.19
ERBB3-219ENST00000551242 PLIN1O60240 522 aa16.23■□□□□ 0.19
ERBB3-219ENST00000551242 GRIN2BQ13224 1484 aa16.23■□□□□ 0.19
ERBB3-219ENST00000551242 USP47Q96K76 1375 aa16.22■□□□□ 0.19
ERBB3-219ENST00000551242 EHBP1L1Q8N3D4 1523 aa16.22■□□□□ 0.19
ERBB3-219ENST00000551242 BCORL1Q5H9F3 1711 aa16.22■□□□□ 0.19
ERBB3-219ENST00000551242 ARID3CA6NKF2 412 aa16.21■□□□□ 0.19
ERBB3-219ENST00000551242 CTTNBP2Q8WZ74 1663 aa16.21■□□□□ 0.19
ERBB3-219ENST00000551242 DDRGK1Q96HY6 314 aa16.2■□□□□ 0.18
ERBB3-219ENST00000551242 MIA2Q96PC5 1412 aa16.2■□□□□ 0.18
ERBB3-219ENST00000551242 TCOF1Q13428 1488 aaKnown RBP16.19■□□□□ 0.18
ERBB3-219ENST00000551242 CDCA7LQ96GN5 454 aa16.19■□□□□ 0.18
ERBB3-219ENST00000551242 LRPPRCP42704 1394 aaKnown RBP16.19■□□□□ 0.18
ERBB3-219ENST00000551242 ARHGEF11O15085 1522 aa16.18■□□□□ 0.18
ERBB3-219ENST00000551242 GAPVD1Q14C86 1478 aa16.17■□□□□ 0.18
ERBB3-219ENST00000551242 DAXXQ9UER7 740 aaPredicted RBP16.15■□□□□ 0.18
ERBB3-219ENST00000551242 CRBNQ96SW2 442 aa16.15■□□□□ 0.18
ERBB3-219ENST00000551242 FRAT2O75474 233 aaPredicted RBP16.13■□□□□ 0.17
ERBB3-219ENST00000551242 MYBBP1AQ9BQG0 1328 aaKnown RBP16.13■□□□□ 0.17
ERBB3-219ENST00000551242 SAMD9Q5K651 1589 aa16.12■□□□□ 0.17
ERBB3-219ENST00000551242 KIF15Q9NS87 1388 aa16.12■□□□□ 0.17
ERBB3-219ENST00000551242 DCAF11Q8TEB1 546 aa16.12■□□□□ 0.17
ERBB3-219ENST00000551242 BRD4O60885 1362 aaPredicted RBP16.12■□□□□ 0.17
ERBB3-219ENST00000551242 ZNF644Q9H582 1327 aaPredicted RBP16.11■□□□□ 0.17
ERBB3-219ENST00000551242 CUL7Q14999 1698 aa16.11■□□□□ 0.17
ERBB3-219ENST00000551242 THOC2Q8NI27 1593 aaKnown RBP16.09■□□□□ 0.17
ERBB3-219ENST00000551242 C20orf194Q5TEA3 1177 aa16.09■□□□□ 0.17
ERBB3-219ENST00000551242 ARID4BQ4LE39 1312 aaPredicted RBP16.08■□□□□ 0.17
ERBB3-219ENST00000551242 CARD11Q9BXL7 1154 aa16.08■□□□□ 0.16
ERBB3-219ENST00000551242 ROCK2O75116 1388 aaKnown RBP16.07■□□□□ 0.16
ERBB3-219ENST00000551242 RALBP1Q15311 655 aa16.07■□□□□ 0.16
ERBB3-219ENST00000551242 ST20-MTHFSA0A0A6YYL1 179 aa16.07■□□□□ 0.16
ERBB3-219ENST00000551242 PDE3BQ13370 1112 aa16.07■□□□□ 0.16
ERBB3-219ENST00000551242 DAPK1P53355 1430 aa16.07■□□□□ 0.16
ERBB3-219ENST00000551242 KDM5CP41229 1560 aa16.06■□□□□ 0.16
ERBB3-219ENST00000551242 ERCC6Q03468 1493 aa16.06■□□□□ 0.16
ERBB3-219ENST00000551242 MBD5Q9P267 1494 aa16.06■□□□□ 0.16
ERBB3-219ENST00000551242 FBLN2P98095 1184 aa16.06■□□□□ 0.16
ERBB3-219ENST00000551242 RSPH6AQ9H0K4 717 aa16.05■□□□□ 0.16
ERBB3-219ENST00000551242 CDK13Q14004 1512 aaKnown RBP16.05■□□□□ 0.16
ERBB3-219ENST00000551242 ABCC5O15440 1437 aa16.05■□□□□ 0.16
ERBB3-219ENST00000551242 FAM43AQ8N2R8 423 aa16.04■□□□□ 0.16
ERBB3-219ENST00000551242 MRC2Q9UBG0 1479 aa16.04■□□□□ 0.16
ERBB3-219ENST00000551242 ZNF608Q9ULD9 1512 aaPredicted RBP16.04■□□□□ 0.16
ERBB3-219ENST00000551242 ROCK1Q13464 1354 aa16.04■□□□□ 0.16
ERBB3-219ENST00000551242 C8orf34Q49A92 452 aa16.03■□□□□ 0.16
ERBB3-219ENST00000551242 NLRP13Q86W25 1043 aa16.03■□□□□ 0.16
ERBB3-219ENST00000551242 KDM2AQ9Y2K7 1162 aa16.03■□□□□ 0.16
ERBB3-219ENST00000551242 PZPP20742 1482 aa16.03■□□□□ 0.16
ERBB3-219ENST00000551242 PKD2Q13563 968 aa16.03■□□□□ 0.16
ERBB3-219ENST00000551242 EPRSP07814 1512 aaKnown RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms