RNA–Protein interactions for RNA: ENST00000550346.5

TROAP-212, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 3

Gene TROAP, Length 640 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-212ENST00000550346 GPATCH8Q9UKJ3 1502 aaKnown RBP20.07■□□□□ 0.8
TROAP-212ENST00000550346 AKNAQ7Z591 1439 aa20.07■□□□□ 0.8
TROAP-212ENST00000550346 PPRC1Q5VV67 1664 aaKnown RBP20.07■□□□□ 0.8
TROAP-212ENST00000550346 ARAP3Q8WWN8 1544 aa20.06■□□□□ 0.8
TROAP-212ENST00000550346 CFAP74Q9C0B2 1584 aa20.05■□□□□ 0.8
TROAP-212ENST00000550346 CDC42BPAQ5VT25 1732 aa20.04■□□□□ 0.8
TROAP-212ENST00000550346 CDC42BPBQ9Y5S2 1711 aa20.03■□□□□ 0.8
TROAP-212ENST00000550346 ITSN2Q9NZM3 1697 aa20.02■□□□□ 0.8
TROAP-212ENST00000550346 PREX2Q70Z35 1606 aa20.02■□□□□ 0.79
TROAP-212ENST00000550346 MYT1LQ9UL68 1186 aa20.01■□□□□ 0.79
TROAP-212ENST00000550346 MYOM3Q5VTT5 1437 aa20■□□□□ 0.79
TROAP-212ENST00000550346 SCAPERQ9BY12 1400 aa20■□□□□ 0.79
TROAP-212ENST00000550346 ADGRL1O94910 1474 aa19.99■□□□□ 0.79
TROAP-212ENST00000550346 RAPGEF3O95398 923 aa19.99■□□□□ 0.79
TROAP-212ENST00000550346 HNRNPMP52272 730 aaKnown RBP eCLIP19.99■□□□□ 0.79
TROAP-212ENST00000550346 KDM6BO15054 1643 aa19.98■□□□□ 0.79
TROAP-212ENST00000550346 DENND4BO75064 1496 aaPredicted RBP19.98■□□□□ 0.79
TROAP-212ENST00000550346 PLEKHH2Q8IVE3 1493 aa19.98■□□□□ 0.79
TROAP-212ENST00000550346 MIA2Q96PC5 1412 aa19.97■□□□□ 0.79
TROAP-212ENST00000550346 RSPH4AQ5TD94 716 aa19.97■□□□□ 0.79
TROAP-212ENST00000550346 ZNF644Q9H582 1327 aaPredicted RBP19.97■□□□□ 0.79
TROAP-212ENST00000550346 FAM50AQ14320 339 aaKnown RBP19.94■□□□□ 0.78
TROAP-212ENST00000550346 AFAP1Q8N556 730 aa19.94■□□□□ 0.78
TROAP-212ENST00000550346 TSPY4P0CV99 314 aa19.93■□□□□ 0.78
TROAP-212ENST00000550346 TSPY10P0CW01 314 aa19.93■□□□□ 0.78
TROAP-212ENST00000550346 KIAA1107Q9UPP5 1409 aa19.93■□□□□ 0.78
TROAP-212ENST00000550346 COL17A1Q9UMD9 1497 aaPredicted RBP19.92■□□□□ 0.78
TROAP-212ENST00000550346 FGD6Q6ZV73 1430 aa19.9■□□□□ 0.78
TROAP-212ENST00000550346 SAMD9LQ8IVG5 1584 aa19.89■□□□□ 0.77
TROAP-212ENST00000550346 CAMSAP2Q08AD1 1489 aa19.88■□□□□ 0.77
TROAP-212ENST00000550346 SPAG9O60271 1321 aaKnown RBP19.88■□□□□ 0.77
TROAP-212ENST00000550346 ZNF518AQ6AHZ1 1483 aa19.87■□□□□ 0.77
TROAP-212ENST00000550346 POGZQ7Z3K3 1410 aa19.86■□□□□ 0.77
TROAP-212ENST00000550346 PTPN23Q9H3S7 1636 aa19.86■□□□□ 0.77
TROAP-212ENST00000550346 ABCC1P33527 1531 aa19.86■□□□□ 0.77
TROAP-212ENST00000550346 SYCP2Q9BX26 1530 aa19.85■□□□□ 0.77
TROAP-212ENST00000550346 TRAPPC8Q9Y2L5 1435 aa19.85■□□□□ 0.77
TROAP-212ENST00000550346 ARHGEF12Q9NZN5 1544 aa19.84■□□□□ 0.77
TROAP-212ENST00000550346 RRBP1Q9P2E9 1410 aaKnown RBP19.83■□□□□ 0.76
TROAP-212ENST00000550346 RICTORQ6R327 1708 aa19.82■□□□□ 0.76
TROAP-212ENST00000550346 MAGI2Q86UL8 1455 aa19.8■□□□□ 0.76
TROAP-212ENST00000550346 MBD5Q9P267 1494 aa19.8■□□□□ 0.76
TROAP-212ENST00000550346 ITGAEP38570 1179 aa19.8■□□□□ 0.76
TROAP-212ENST00000550346 TCOF1Q13428 1488 aaKnown RBP19.79■□□□□ 0.76
TROAP-212ENST00000550346 CCDC141Q6ZP82 1450 aa19.79■□□□□ 0.76
TROAP-212ENST00000550346 TRIM26Q12899 539 aaPredicted RBP19.77■□□□□ 0.76
TROAP-212ENST00000550346 ARHGEF5Q12774 1597 aa19.77■□□□□ 0.76
TROAP-212ENST00000550346 ARID4BQ4LE39 1312 aaPredicted RBP19.76■□□□□ 0.75
TROAP-212ENST00000550346 MLH3Q9UHC1 1453 aa19.76■□□□□ 0.75
TROAP-212ENST00000550346 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.76■□□□□ 0.75
TROAP-212ENST00000550346 CHIC2Q9UKJ5 165 aa19.76■□□□□ 0.75
TROAP-212ENST00000550346 FRMPD1Q5SYB0 1578 aa19.75■□□□□ 0.75
TROAP-212ENST00000550346 ZMYM4Q5VZL5 1548 aa19.74■□□□□ 0.75
TROAP-212ENST00000550346 ZFYVE16Q7Z3T8 1539 aa19.74■□□□□ 0.75
TROAP-212ENST00000550346 KDM5CP41229 1560 aa19.74■□□□□ 0.75
TROAP-212ENST00000550346 RTEL1-TNFRSF6BF6WH68 1400 aa19.73■□□□□ 0.75
TROAP-212ENST00000550346 ATP10AO60312 1499 aa19.73■□□□□ 0.75
TROAP-212ENST00000550346 ABCC5O15440 1437 aa19.72■□□□□ 0.75
TROAP-212ENST00000550346 DAPK1P53355 1430 aa19.72■□□□□ 0.75
TROAP-212ENST00000550346 HECW2Q9P2P5 1572 aa19.72■□□□□ 0.75
TROAP-212ENST00000550346 C9orf84Q5VXU9 1444 aa19.7■□□□□ 0.74
TROAP-212ENST00000550346 YEATS2Q9ULM3 1422 aa19.7■□□□□ 0.74
TROAP-212ENST00000550346 DNMT1P26358 1616 aaKnown RBP19.7■□□□□ 0.74
TROAP-212ENST00000550346 RRP7BPQ9NSQ0 103 aa19.7■□□□□ 0.74
TROAP-212ENST00000550346 ATP7AQ04656 1500 aa19.7■□□□□ 0.74
TROAP-212ENST00000550346 ANKRD30AQ9BXX3 1397 aa19.69■□□□□ 0.74
TROAP-212ENST00000550346 CROCC2H7BZ55 1655 aa19.68■□□□□ 0.74
TROAP-212ENST00000550346 AEBP2Q6ZN18 517 aaPredicted RBP19.68■□□□□ 0.74
TROAP-212ENST00000550346 KIDINS220Q9ULH0 1771 aa19.67■□□□□ 0.74
TROAP-212ENST00000550346 SHANK2Q9UPX8 1470 aa19.65■□□□□ 0.74
TROAP-212ENST00000550346 ARHGEF40Q8TER5 1519 aa19.64■□□□□ 0.73
TROAP-212ENST00000550346 INO80Q9ULG1 1556 aaPredicted RBP19.63■□□□□ 0.73
TROAP-212ENST00000550346 MAST1Q9Y2H9 1570 aa19.63■□□□□ 0.73
TROAP-212ENST00000550346 PTPRKQ15262 1439 aa19.63■□□□□ 0.73
TROAP-212ENST00000550346 DHX29Q7Z478 1369 aaKnown RBP19.63■□□□□ 0.73
TROAP-212ENST00000550346 MLECQ14165 292 aa19.63■□□□□ 0.73
TROAP-212ENST00000550346 PCGF6Q9BYE7 350 aa19.63■□□□□ 0.73
TROAP-212ENST00000550346 A2MP01023 1474 aa19.62■□□□□ 0.73
TROAP-212ENST00000550346 ESF1Q9H501 851 aaKnown RBP19.62■□□□□ 0.73
TROAP-212ENST00000550346 ADGBQ8N7X0 1667 aa19.61■□□□□ 0.73
TROAP-212ENST00000550346 DIP2CQ9Y2E4 1556 aa19.61■□□□□ 0.73
TROAP-212ENST00000550346 KIF15Q9NS87 1388 aa19.6■□□□□ 0.73
TROAP-212ENST00000550346 KIF3BO15066 747 aa19.6■□□□□ 0.73
TROAP-212ENST00000550346 ABCA6Q8N139 1617 aa19.6■□□□□ 0.73
TROAP-212ENST00000550346 NCOA1Q15788 1441 aa19.59■□□□□ 0.73
TROAP-212ENST00000550346 ROCK1Q13464 1354 aa19.58■□□□□ 0.73
TROAP-212ENST00000550346 GGT6Q6P531 493 aa19.58■□□□□ 0.72
TROAP-212ENST00000550346 DUOX2Q9NRD8 1548 aa19.56■□□□□ 0.72
TROAP-212ENST00000550346 PLXNC1O60486 1568 aa19.55■□□□□ 0.72
TROAP-212ENST00000550346 ADGRL2O95490 1459 aa19.54■□□□□ 0.72
TROAP-212ENST00000550346 REREQ9P2R6 1566 aa19.54■□□□□ 0.72
TROAP-212ENST00000550346 PPP6R1Q9UPN7 881 aa19.53■□□□□ 0.72
TROAP-212ENST00000550346 AGLP35573 1532 aa19.52■□□□□ 0.72
TROAP-212ENST00000550346 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.52■□□□□ 0.723e-6■■■■□ 20.1
TROAP-212ENST00000550346 ANKRD50Q9ULJ7 1429 aa19.5■□□□□ 0.71
TROAP-212ENST00000550346 GCC2Q8IWJ2 1684 aa19.49■□□□□ 0.71
TROAP-212ENST00000550346 ERBINQ96RT1 1412 aa19.49■□□□□ 0.71
TROAP-212ENST00000550346 WASHC2CQ9Y4E1 1318 aa19.49■□□□□ 0.71
TROAP-212ENST00000550346 KANK1Q14678 1352 aa19.47■□□□□ 0.71
TROAP-212ENST00000550346 BCORL1Q5H9F3 1711 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms