RNA–Protein interactions for RNA: ENST00000549417.5

LIN7A-202, Transcript of lin-7 homolog A, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene LIN7A, Length 905 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7A-202ENST00000549417 LTBP4Q8N2S1 1624 aa11.96□□□□□ -0.5
LIN7A-202ENST00000549417 ZFYVE16Q7Z3T8 1539 aa11.96□□□□□ -0.5
LIN7A-202ENST00000549417 FHOD3Q2V2M9 1422 aa11.94□□□□□ -0.5
LIN7A-202ENST00000549417 UBAP1LF5GYI3 381 aa11.93□□□□□ -0.5
LIN7A-202ENST00000549417 UHRF1BP1Q6BDS2 1440 aa11.93□□□□□ -0.5
LIN7A-202ENST00000549417 EFCAB5A4FU69 1503 aa11.92□□□□□ -0.5
LIN7A-202ENST00000549417 PTPRTO14522 1441 aa11.92□□□□□ -0.5
LIN7A-202ENST00000549417 ZMYM4Q5VZL5 1548 aa11.91□□□□□ -0.5
LIN7A-202ENST00000549417 ARHGEF12Q9NZN5 1544 aa11.91□□□□□ -0.5
LIN7A-202ENST00000549417 FAM9AQ8IZU1 332 aaPredicted RBP11.91□□□□□ -0.5
LIN7A-202ENST00000549417 HECW1Q76N89 1606 aa11.9□□□□□ -0.5
LIN7A-202ENST00000549417 IQSEC2Q5JU85 1478 aa11.89□□□□□ -0.51
LIN7A-202ENST00000549417 MED1Q15648 1581 aaPredicted RBP11.88□□□□□ -0.51
LIN7A-202ENST00000549417 RAPGEF6Q8TEU7 1601 aa11.87□□□□□ -0.51
LIN7A-202ENST00000549417 CFAP74Q9C0B2 1584 aa11.87□□□□□ -0.51
LIN7A-202ENST00000549417 SCAF1Q9H7N4 1312 aaKnown RBP11.86□□□□□ -0.51
LIN7A-202ENST00000549417 MAGI2Q86UL8 1455 aa11.86□□□□□ -0.51
LIN7A-202ENST00000549417 SETD1BQ9UPS6 1966 aaKnown RBP11.86□□□□□ -0.51
LIN7A-202ENST00000549417 ATP10AO60312 1499 aa11.85□□□□□ -0.51
LIN7A-202ENST00000549417 C9orf84Q5VXU9 1444 aa11.85□□□□□ -0.51
LIN7A-202ENST00000549417 ZNF335Q9H4Z2 1342 aaPredicted RBP11.85□□□□□ -0.51
LIN7A-202ENST00000549417 HSPA1LP34931 641 aa11.84□□□□□ -0.51
LIN7A-202ENST00000549417 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.84□□□□□ -0.51
LIN7A-202ENST00000549417 SCAPERQ9BY12 1400 aa11.84□□□□□ -0.51
LIN7A-202ENST00000549417 PLEKHD1A6NEE1 506 aa11.83□□□□□ -0.52
LIN7A-202ENST00000549417 PIP4K2BP78356 416 aa11.83□□□□□ -0.52
LIN7A-202ENST00000549417 NUP153P49790 1475 aaKnown RBP11.83□□□□□ -0.52
LIN7A-202ENST00000549417 C3P01024 1663 aa11.82□□□□□ -0.52
LIN7A-202ENST00000549417 NCOA1Q15788 1441 aa11.82□□□□□ -0.52
LIN7A-202ENST00000549417 NCKAP5LQ9HCH0 1330 aa11.82□□□□□ -0.52
LIN7A-202ENST00000549417 RANGAP1P46060 587 aaPredicted RBP11.81□□□□□ -0.52
LIN7A-202ENST00000549417 CAMSAP1Q5T5Y3 1602 aa11.79□□□□□ -0.52
LIN7A-202ENST00000549417 MYT1LQ9UL68 1186 aa11.79□□□□□ -0.52
LIN7A-202ENST00000549417 ESF1Q9H501 851 aaKnown RBP11.77□□□□□ -0.53
LIN7A-202ENST00000549417 TRAPPC8Q9Y2L5 1435 aa11.77□□□□□ -0.53
LIN7A-202ENST00000549417 SAMD9Q5K651 1589 aa11.76□□□□□ -0.53
LIN7A-202ENST00000549417 PRXQ9BXM0 1461 aa11.75□□□□□ -0.53
LIN7A-202ENST00000549417 AFAP1Q8N556 730 aa11.74□□□□□ -0.53
LIN7A-202ENST00000549417 PLCH2O75038 1416 aa11.73□□□□□ -0.53
LIN7A-202ENST00000549417 DIP2CQ9Y2E4 1556 aa11.72□□□□□ -0.53
LIN7A-202ENST00000549417 CDK13Q14004 1512 aaKnown RBP11.7□□□□□ -0.54
LIN7A-202ENST00000549417 EFCAB2Q5VUJ9 269 aa11.7□□□□□ -0.54
LIN7A-202ENST00000549417 ABCA6Q8N139 1617 aa11.7□□□□□ -0.54
LIN7A-202ENST00000549417 ZNF518AQ6AHZ1 1483 aa11.7□□□□□ -0.54
LIN7A-202ENST00000549417 SUPT6HQ7KZ85 1726 aaKnown RBP11.69□□□□□ -0.54
LIN7A-202ENST00000549417 TOM1O60784 492 aa11.69□□□□□ -0.54
LIN7A-202ENST00000549417 MYO5CQ9NQX4 1742 aa11.68□□□□□ -0.54
LIN7A-202ENST00000549417 KDM5CP41229 1560 aa11.67□□□□□ -0.54
LIN7A-202ENST00000549417 PKD2Q13563 968 aa11.66□□□□□ -0.54
LIN7A-202ENST00000549417 RGS17Q9UGC6 210 aaPredicted RBP11.66□□□□□ -0.54
LIN7A-202ENST00000549417 REREQ9P2R6 1566 aa11.65□□□□□ -0.54
LIN7A-202ENST00000549417 ARHGAP5Q13017 1502 aa11.65□□□□□ -0.55
LIN7A-202ENST00000549417 CNTLNQ9NXG0 1405 aa11.64□□□□□ -0.55
LIN7A-202ENST00000549417 ATP1B4Q9UN42 357 aaPredicted RBP11.64□□□□□ -0.55
LIN7A-202ENST00000549417 AGLP35573 1532 aa11.64□□□□□ -0.55
LIN7A-202ENST00000549417 ZMYM3Q14202 1370 aa11.64□□□□□ -0.55
LIN7A-202ENST00000549417 MYO3AQ8NEV4 1616 aa11.64□□□□□ -0.55
LIN7A-202ENST00000549417 TCOF1Q13428 1488 aaKnown RBP11.63□□□□□ -0.55
LIN7A-202ENST00000549417 NPATQ14207 1427 aa11.63□□□□□ -0.55
LIN7A-202ENST00000549417 KIF14Q15058 1648 aa11.63□□□□□ -0.55
LIN7A-202ENST00000549417 PLA2R1Q13018 1463 aa11.63□□□□□ -0.55
LIN7A-202ENST00000549417 CEP170BQ9Y4F5 1589 aaPredicted RBP11.62□□□□□ -0.55
LIN7A-202ENST00000549417 ZNF142P52746 1687 aaPredicted RBP11.62□□□□□ -0.55
LIN7A-202ENST00000549417 ALKQ9UM73 1620 aa11.6□□□□□ -0.55
LIN7A-202ENST00000549417 MROH2AA6NES4 1674 aa11.6□□□□□ -0.55
LIN7A-202ENST00000549417 CLTCQ00610 1675 aaKnown RBP11.6□□□□□ -0.55
LIN7A-202ENST00000549417 MLH3Q9UHC1 1453 aa11.6□□□□□ -0.55
LIN7A-202ENST00000549417 CPS1P31327 1500 aa11.6□□□□□ -0.55
LIN7A-202ENST00000549417 SHANK2Q9UPX8 1470 aa11.59□□□□□ -0.55
LIN7A-202ENST00000549417 POTEAQ6S8J7 498 aa11.58□□□□□ -0.56
LIN7A-202ENST00000549417 KIDINS220Q9ULH0 1771 aa11.58□□□□□ -0.56
LIN7A-202ENST00000549417 PTPRKQ15262 1439 aa11.57□□□□□ -0.56
LIN7A-202ENST00000549417 SETD1AO15047 1707 aaKnown RBP11.57□□□□□ -0.56
LIN7A-202ENST00000549417 CDC42BPBQ9Y5S2 1711 aa11.56□□□□□ -0.56
LIN7A-202ENST00000549417 ITSN2Q9NZM3 1697 aa11.55□□□□□ -0.56
LIN7A-202ENST00000549417 POLR1AO95602 1720 aaPredicted RBP11.55□□□□□ -0.56
LIN7A-202ENST00000549417 NEURL4Q96JN8 1562 aa11.54□□□□□ -0.56
LIN7A-202ENST00000549417 DNMT1P26358 1616 aaKnown RBP11.54□□□□□ -0.56
LIN7A-202ENST00000549417 CSRNP3Q8WYN3 585 aa11.54□□□□□ -0.56
LIN7A-202ENST00000549417 ABCC1P33527 1531 aa11.54□□□□□ -0.56
LIN7A-202ENST00000549417 SRCAPQ6ZRS2 3230 aa11.54□□□□□ -0.56
LIN7A-202ENST00000549417 GGT6Q6P531 493 aa11.53□□□□□ -0.56
LIN7A-202ENST00000549417 VWDEQ8N2E2 1590 aa11.53□□□□□ -0.56
LIN7A-202ENST00000549417 A2ML1A8K2U0 1454 aa11.52□□□□□ -0.56
LIN7A-202ENST00000549417 CDK11AQ9UQ88 783 aaPredicted RBP11.52□□□□□ -0.57
LIN7A-202ENST00000549417 TROQ12816 1431 aaPredicted RBP11.51□□□□□ -0.57
LIN7A-202ENST00000549417 ZNF777Q9ULD5 760 aaPredicted RBP11.49□□□□□ -0.57
LIN7A-202ENST00000549417 CLIP1P30622 1438 aa11.49□□□□□ -0.57
LIN7A-202ENST00000549417 SAMD9LQ8IVG5 1584 aa11.49□□□□□ -0.57
LIN7A-202ENST00000549417 PREX2Q70Z35 1606 aa11.49□□□□□ -0.57
LIN7A-202ENST00000549417 STRCP1A6NGW2 1772 aa11.49□□□□□ -0.57
LIN7A-202ENST00000549417 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.48□□□□□ -0.57
LIN7A-202ENST00000549417 RNF17Q9BXT8 1623 aaKnown RBP11.47□□□□□ -0.57
LIN7A-202ENST00000549417 LRRC7Q96NW7 1537 aa11.47□□□□□ -0.57
LIN7A-202ENST00000549417 SPAG9O60271 1321 aaKnown RBP11.47□□□□□ -0.57
LIN7A-202ENST00000549417 FBXO31Q5XUX0 539 aaPredicted RBP11.47□□□□□ -0.57
LIN7A-202ENST00000549417 ANKLE2Q86XL3 938 aa11.47□□□□□ -0.57
LIN7A-202ENST00000549417 EHMT2Q96KQ7 1210 aa11.47□□□□□ -0.57
LIN7A-202ENST00000549417 NPHP4O75161 1426 aaPredicted RBP11.45□□□□□ -0.58
LIN7A-202ENST00000549417 HNRNPMP52272 730 aaKnown RBP eCLIP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms