RNA–Protein interactions for RNA: ENST00000547877.5

LETMD1-212, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 2,020 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-212ENST00000547877 PLCH2O75038 1416 aa22.73■■□□□ 1.23
LETMD1-212ENST00000547877 CD109Q6YHK3 1445 aa22.71■■□□□ 1.23
LETMD1-212ENST00000547877 KIF13AQ9H1H9 1805 aa22.7■■□□□ 1.22
LETMD1-212ENST00000547877 MAP3K4Q9Y6R4 1608 aa22.7■■□□□ 1.22
LETMD1-212ENST00000547877 ARHGAP5Q13017 1502 aa22.7■■□□□ 1.22
LETMD1-212ENST00000547877 PTPN23Q9H3S7 1636 aa22.69■■□□□ 1.22
LETMD1-212ENST00000547877 ARAP3Q8WWN8 1544 aa22.68■■□□□ 1.22
LETMD1-212ENST00000547877 ZNF777Q9ULD5 760 aaPredicted RBP22.67■■□□□ 1.22
LETMD1-212ENST00000547877 ZNF644Q9H582 1327 aaPredicted RBP22.67■■□□□ 1.22
LETMD1-212ENST00000547877 FAM50AQ14320 339 aaKnown RBP22.66■■□□□ 1.22
LETMD1-212ENST00000547877 TCOF1Q13428 1488 aaKnown RBP22.65■■□□□ 1.22
LETMD1-212ENST00000547877 EFCAB2Q5VUJ9 269 aa22.64■■□□□ 1.22
LETMD1-212ENST00000547877 FANCAO15360 1455 aa22.64■■□□□ 1.21
LETMD1-212ENST00000547877 CAMSAP2Q08AD1 1489 aa22.64■■□□□ 1.21
LETMD1-212ENST00000547877 SAMD9LQ8IVG5 1584 aa22.62■■□□□ 1.21
LETMD1-212ENST00000547877 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.62■■□□□ 1.21
LETMD1-212ENST00000547877 TRHP20396 242 aaPredicted RBP22.6■■□□□ 1.21
LETMD1-212ENST00000547877 TSPOAP1O95153 1857 aa22.59■■□□□ 1.21
LETMD1-212ENST00000547877 PPRC1Q5VV67 1664 aaKnown RBP22.57■■□□□ 1.2
LETMD1-212ENST00000547877 CFAP74Q9C0B2 1584 aa22.56■■□□□ 1.2
LETMD1-212ENST00000547877 PLEKHH2Q8IVE3 1493 aa22.54■■□□□ 1.2
LETMD1-212ENST00000547877 ABCC1P33527 1531 aa22.54■■□□□ 1.2
LETMD1-212ENST00000547877 SYCP2Q9BX26 1530 aa22.54■■□□□ 1.2
LETMD1-212ENST00000547877 AKNAQ7Z591 1439 aa22.54■■□□□ 1.2
LETMD1-212ENST00000547877 NEO1Q92859 1461 aa22.54■■□□□ 1.2
LETMD1-212ENST00000547877 ITGAEP38570 1179 aa22.53■■□□□ 1.2
LETMD1-212ENST00000547877 HNRNPMP52272 730 aaKnown RBP eCLIP22.53■■□□□ 1.2
LETMD1-212ENST00000547877 KIAA1107Q9UPP5 1409 aa22.53■■□□□ 1.2
LETMD1-212ENST00000547877 TEX14Q8IWB6 1497 aa22.53■■□□□ 1.2
LETMD1-212ENST00000547877 ADGRL1O94910 1474 aa22.52■■□□□ 1.2
LETMD1-212ENST00000547877 MBD5Q9P267 1494 aa22.52■■□□□ 1.2
LETMD1-212ENST00000547877 ARHGEF12Q9NZN5 1544 aa22.52■■□□□ 1.2
LETMD1-212ENST00000547877 DNMT1P26358 1616 aaKnown RBP22.51■■□□□ 1.19
LETMD1-212ENST00000547877 DAPK1P53355 1430 aa22.49■■□□□ 1.19
LETMD1-212ENST00000547877 ARHGEF5Q12774 1597 aa22.49■■□□□ 1.19
LETMD1-212ENST00000547877 ABCC5O15440 1437 aa22.48■■□□□ 1.19
LETMD1-212ENST00000547877 SCAPERQ9BY12 1400 aa22.48■■□□□ 1.19
LETMD1-212ENST00000547877 PTPRKQ15262 1439 aa22.47■■□□□ 1.19
LETMD1-212ENST00000547877 CCDC141Q6ZP82 1450 aa22.46■■□□□ 1.19
LETMD1-212ENST00000547877 RSPH4AQ5TD94 716 aa22.46■■□□□ 1.19
LETMD1-212ENST00000547877 TRAPPC8Q9Y2L5 1435 aa22.46■■□□□ 1.19
LETMD1-212ENST00000547877 CROCC2H7BZ55 1655 aa22.43■■□□□ 1.18
LETMD1-212ENST00000547877 AFAP1Q8N556 730 aa22.42■■□□□ 1.18
LETMD1-212ENST00000547877 CHIC2Q9UKJ5 165 aa22.41■■□□□ 1.18
LETMD1-212ENST00000547877 TSPY4P0CV99 314 aa22.41■■□□□ 1.18
LETMD1-212ENST00000547877 TSPY10P0CW01 314 aa22.41■■□□□ 1.18
LETMD1-212ENST00000547877 POGZQ7Z3K3 1410 aa22.4■■□□□ 1.18
LETMD1-212ENST00000547877 ZNF518AQ6AHZ1 1483 aa22.4■■□□□ 1.18
LETMD1-212ENST00000547877 SHANK2Q9UPX8 1470 aa22.4■■□□□ 1.18
LETMD1-212ENST00000547877 DENND4BO75064 1496 aaPredicted RBP22.4■■□□□ 1.18
LETMD1-212ENST00000547877 C9orf84Q5VXU9 1444 aa22.39■■□□□ 1.17
LETMD1-212ENST00000547877 RAPGEF3O95398 923 aa22.38■■□□□ 1.17
LETMD1-212ENST00000547877 ZEB1P37275 1124 aaPredicted RBP22.37■■□□□ 1.17
LETMD1-212ENST00000547877 RICTORQ6R327 1708 aa22.35■■□□□ 1.17
LETMD1-212ENST00000547877 KDM5CP41229 1560 aa22.35■■□□□ 1.17
LETMD1-212ENST00000547877 SPAG9O60271 1321 aaKnown RBP22.34■■□□□ 1.17
LETMD1-212ENST00000547877 COL17A1Q9UMD9 1497 aaPredicted RBP22.34■■□□□ 1.17
LETMD1-212ENST00000547877 MAST1Q9Y2H9 1570 aa22.34■■□□□ 1.17
LETMD1-212ENST00000547877 ROCK1Q13464 1354 aa22.33■■□□□ 1.17
LETMD1-212ENST00000547877 FRMPD1Q5SYB0 1578 aa22.33■■□□□ 1.17
LETMD1-212ENST00000547877 ADGBQ8N7X0 1667 aa22.33■■□□□ 1.17
LETMD1-212ENST00000547877 ADGRL2O95490 1459 aa22.33■■□□□ 1.16
LETMD1-212ENST00000547877 NCOA1Q15788 1441 aa22.32■■□□□ 1.16
LETMD1-212ENST00000547877 RRP7BPQ9NSQ0 103 aa22.31■■□□□ 1.16
LETMD1-212ENST00000547877 ZFYVE16Q7Z3T8 1539 aa22.31■■□□□ 1.16
LETMD1-212ENST00000547877 ANKRD30AQ9BXX3 1397 aa22.31■■□□□ 1.16
LETMD1-212ENST00000547877 RTEL1-TNFRSF6BF6WH68 1400 aa22.3■■□□□ 1.16
LETMD1-212ENST00000547877 INO80Q9ULG1 1556 aaPredicted RBP22.3■■□□□ 1.16
LETMD1-212ENST00000547877 HFM1A2PYH4 1435 aa22.3■■□□□ 1.16
LETMD1-212ENST00000547877 ATP7AQ04656 1500 aa22.29■■□□□ 1.16
LETMD1-212ENST00000547877 HECW2Q9P2P5 1572 aa22.28■■□□□ 1.16
LETMD1-212ENST00000547877 MLH3Q9UHC1 1453 aa22.28■■□□□ 1.16
LETMD1-212ENST00000547877 MYT1LQ9UL68 1186 aa22.28■■□□□ 1.16
LETMD1-212ENST00000547877 NAIPQ13075 1403 aa22.28■■□□□ 1.16
LETMD1-212ENST00000547877 KIDINS220Q9ULH0 1771 aa22.27■■□□□ 1.16
LETMD1-212ENST00000547877 PLXNC1O60486 1568 aa22.27■■□□□ 1.16
LETMD1-212ENST00000547877 ZMYM4Q5VZL5 1548 aa22.26■■□□□ 1.15
LETMD1-212ENST00000547877 KIF15Q9NS87 1388 aa22.26■■□□□ 1.15
LETMD1-212ENST00000547877 KDM6BO15054 1643 aa22.25■■□□□ 1.15
LETMD1-212ENST00000547877 SETD5Q9C0A6 1442 aa22.24■■□□□ 1.15
LETMD1-212ENST00000547877 GCC2Q8IWJ2 1684 aa22.24■■□□□ 1.15
LETMD1-212ENST00000547877 MAGI2Q86UL8 1455 aa22.21■■□□□ 1.15
LETMD1-212ENST00000547877 RAB3GAP2Q9H2M9 1393 aa22.2■■□□□ 1.14
LETMD1-212ENST00000547877 ABCA6Q8N139 1617 aa22.19■■□□□ 1.14
LETMD1-212ENST00000547877 YEATS2Q9ULM3 1422 aa22.19■■□□□ 1.14
LETMD1-212ENST00000547877 ANKRD50Q9ULJ7 1429 aa22.18■■□□□ 1.14
LETMD1-212ENST00000547877 DUOX2Q9NRD8 1548 aa22.18■■□□□ 1.14
LETMD1-212ENST00000547877 DIP2CQ9Y2E4 1556 aa22.16■■□□□ 1.14
LETMD1-212ENST00000547877 ERBINQ96RT1 1412 aa22.13■■□□□ 1.13
LETMD1-212ENST00000547877 A2MP01023 1474 aa22.13■■□□□ 1.13
LETMD1-212ENST00000547877 DHX29Q7Z478 1369 aaKnown RBP22.13■■□□□ 1.13
LETMD1-212ENST00000547877 ARHGEF40Q8TER5 1519 aa22.11■■□□□ 1.13
LETMD1-212ENST00000547877 ATP10AO60312 1499 aa22.1■■□□□ 1.13
LETMD1-212ENST00000547877 EIF2AK4Q9P2K8 1649 aaKnown RBP22.05■■□□□ 1.12
LETMD1-212ENST00000547877 REREQ9P2R6 1566 aa22.04■■□□□ 1.12
LETMD1-212ENST00000547877 KIF3BO15066 747 aa22.04■■□□□ 1.12
LETMD1-212ENST00000547877 TRIM52Q96A61 297 aa22.02■■□□□ 1.12
LETMD1-212ENST00000547877 ACIN1Q9UKV3 1341 aaKnown RBP22.01■■□□□ 1.11
LETMD1-212ENST00000547877 BCORL1Q5H9F3 1711 aa22■■□□□ 1.11
LETMD1-212ENST00000547877 SIGLEC1Q9BZZ2 1709 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms