RNA–Protein interactions for RNA: ENST00000547204.5

ARFGAP1-220, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 2 BASIC

Gene ARFGAP1, Length 1,327 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-220ENST00000547204 FGD6Q6ZV73 1430 aa25.75■■□□□ 1.71
ARFGAP1-220ENST00000547204 ADGRL1O94910 1474 aa25.74■■□□□ 1.71
ARFGAP1-220ENST00000547204 ITSN2Q9NZM3 1697 aa25.73■■□□□ 1.71
ARFGAP1-220ENST00000547204 NEO1Q92859 1461 aa25.71■■□□□ 1.71
ARFGAP1-220ENST00000547204 MIA2Q96PC5 1412 aa25.69■■□□□ 1.7
ARFGAP1-220ENST00000547204 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.68■■□□□ 1.71e-6■□□□□ 10.3
ARFGAP1-220ENST00000547204 GPATCH8Q9UKJ3 1502 aaKnown RBP25.67■■□□□ 1.7
ARFGAP1-220ENST00000547204 CDC42BPAQ5VT25 1732 aa25.67■■□□□ 1.7
ARFGAP1-220ENST00000547204 TTC37Q6PGP7 1564 aa25.67■■□□□ 1.7
ARFGAP1-220ENST00000547204 PTPN23Q9H3S7 1636 aa25.66■■□□□ 1.7
ARFGAP1-220ENST00000547204 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.65■■□□□ 1.71e-7■■□□□ 12
ARFGAP1-220ENST00000547204 TCOF1Q13428 1488 aaKnown RBP25.64■■□□□ 1.69
ARFGAP1-220ENST00000547204 PREX2Q70Z35 1606 aa25.62■■□□□ 1.69
ARFGAP1-220ENST00000547204 FAM50AQ14320 339 aaKnown RBP25.62■■□□□ 1.69
ARFGAP1-220ENST00000547204 MYO5CQ9NQX4 1742 aa25.61■■□□□ 1.69
ARFGAP1-220ENST00000547204 RAPGEF3O95398 923 aa25.61■■□□□ 1.69
ARFGAP1-220ENST00000547204 FANCAO15360 1455 aa25.59■■□□□ 1.69
ARFGAP1-220ENST00000547204 CFDP1Q9UEE9 299 aaPredicted RBP25.58■■□□□ 1.69
ARFGAP1-220ENST00000547204 FRMPD1Q5SYB0 1578 aa25.57■■□□□ 1.68
ARFGAP1-220ENST00000547204 CFAP74Q9C0B2 1584 aa25.57■■□□□ 1.68
ARFGAP1-220ENST00000547204 AKNAQ7Z591 1439 aa25.56■■□□□ 1.68
ARFGAP1-220ENST00000547204 CDC42BPBQ9Y5S2 1711 aa25.56■■□□□ 1.68
ARFGAP1-220ENST00000547204 CAMSAP2Q08AD1 1489 aa25.54■■□□□ 1.68
ARFGAP1-220ENST00000547204 DENND4BO75064 1496 aaPredicted RBP25.53■■□□□ 1.68
ARFGAP1-220ENST00000547204 PLCH2O75038 1416 aa25.52■■□□□ 1.68
ARFGAP1-220ENST00000547204 ARHGAP5Q13017 1502 aa25.52■■□□□ 1.68
ARFGAP1-220ENST00000547204 ITGAEP38570 1179 aa25.48■■□□□ 1.67
ARFGAP1-220ENST00000547204 ZNF644Q9H582 1327 aaPredicted RBP25.47■■□□□ 1.67
ARFGAP1-220ENST00000547204 ZNF777Q9ULD5 760 aaPredicted RBP25.47■■□□□ 1.67
ARFGAP1-220ENST00000547204 SAMD9LQ8IVG5 1584 aa25.46■■□□□ 1.67
ARFGAP1-220ENST00000547204 RICTORQ6R327 1708 aa25.46■■□□□ 1.67
ARFGAP1-220ENST00000547204 DNMT1P26358 1616 aaKnown RBP25.45■■□□□ 1.66
ARFGAP1-220ENST00000547204 ARHGEF40Q8TER5 1519 aa25.44■■□□□ 1.66
ARFGAP1-220ENST00000547204 ZMYM4Q5VZL5 1548 aa25.41■■□□□ 1.66
ARFGAP1-220ENST00000547204 EFCAB2Q5VUJ9 269 aa25.41■■□□□ 1.66
ARFGAP1-220ENST00000547204 PLEKHH2Q8IVE3 1493 aa25.41■■□□□ 1.66
ARFGAP1-220ENST00000547204 DAPK1P53355 1430 aa25.41■■□□□ 1.66
ARFGAP1-220ENST00000547204 SCAPERQ9BY12 1400 aa25.4■■□□□ 1.66
ARFGAP1-220ENST00000547204 PTPRKQ15262 1439 aa25.39■■□□□ 1.66
ARFGAP1-220ENST00000547204 POGZQ7Z3K3 1410 aa25.39■■□□□ 1.66
ARFGAP1-220ENST00000547204 ARHGEF5Q12774 1597 aa25.39■■□□□ 1.65
ARFGAP1-220ENST00000547204 ABCC5O15440 1437 aa25.38■■□□□ 1.65
ARFGAP1-220ENST00000547204 CROCC2H7BZ55 1655 aa25.37■■□□□ 1.65
ARFGAP1-220ENST00000547204 KIAA1107Q9UPP5 1409 aa25.36■■□□□ 1.65
ARFGAP1-220ENST00000547204 ARID4BQ4LE39 1312 aaPredicted RBP25.36■■□□□ 1.65
ARFGAP1-220ENST00000547204 ABCC1P33527 1531 aa25.36■■□□□ 1.65
ARFGAP1-220ENST00000547204 ZFYVE16Q7Z3T8 1539 aa25.36■■□□□ 1.65
ARFGAP1-220ENST00000547204 SYCP2Q9BX26 1530 aa25.36■■□□□ 1.65
ARFGAP1-220ENST00000547204 MAGI2Q86UL8 1455 aa25.34■■□□□ 1.65
ARFGAP1-220ENST00000547204 MBD5Q9P267 1494 aa25.34■■□□□ 1.65
ARFGAP1-220ENST00000547204 YEATS2Q9ULM3 1422 aa25.34■■□□□ 1.65
ARFGAP1-220ENST00000547204 ADAMTSL3P82987 1691 aa25.34■■□□□ 1.65
ARFGAP1-220ENST00000547204 BCORL1Q5H9F3 1711 aa25.32■■□□□ 1.64
ARFGAP1-220ENST00000547204 CCDC141Q6ZP82 1450 aa25.31■■□□□ 1.64
ARFGAP1-220ENST00000547204 SHANK2Q9UPX8 1470 aa25.31■■□□□ 1.64
ARFGAP1-220ENST00000547204 HNRNPMP52272 730 aaKnown RBP eCLIP25.3■■□□□ 1.645e-16■■■□□ 15.4
ARFGAP1-220ENST00000547204 ADGBQ8N7X0 1667 aa25.29■■□□□ 1.64
ARFGAP1-220ENST00000547204 RSPH4AQ5TD94 716 aa25.29■■□□□ 1.64
ARFGAP1-220ENST00000547204 ARHGEF12Q9NZN5 1544 aa25.29■■□□□ 1.64
ARFGAP1-220ENST00000547204 HECW2Q9P2P5 1572 aa25.29■■□□□ 1.64
ARFGAP1-220ENST00000547204 PTPRMP28827 1452 aa25.28■■□□□ 1.64
ARFGAP1-220ENST00000547204 ZNF518AQ6AHZ1 1483 aa25.27■■□□□ 1.64
ARFGAP1-220ENST00000547204 HFM1A2PYH4 1435 aa25.27■■□□□ 1.64
ARFGAP1-220ENST00000547204 ROCK1Q13464 1354 aa25.27■■□□□ 1.64
ARFGAP1-220ENST00000547204 MADDQ8WXG6 1647 aa25.26■■□□□ 1.63
ARFGAP1-220ENST00000547204 CHIC2Q9UKJ5 165 aa25.26■■□□□ 1.63
ARFGAP1-220ENST00000547204 SETD5Q9C0A6 1442 aa25.25■■□□□ 1.63
ARFGAP1-220ENST00000547204 ADGRL2O95490 1459 aa25.24■■□□□ 1.63
ARFGAP1-220ENST00000547204 GCC2Q8IWJ2 1684 aa25.24■■□□□ 1.63
ARFGAP1-220ENST00000547204 C9orf84Q5VXU9 1444 aa25.24■■□□□ 1.63
ARFGAP1-220ENST00000547204 MAST1Q9Y2H9 1570 aa25.23■■□□□ 1.63
ARFGAP1-220ENST00000547204 KDM5CP41229 1560 aa25.22■■□□□ 1.63
ARFGAP1-220ENST00000547204 TSPY4P0CV99 314 aa25.22■■□□□ 1.63
ARFGAP1-220ENST00000547204 TSPY10P0CW01 314 aa25.22■■□□□ 1.63
ARFGAP1-220ENST00000547204 SIGLEC1Q9BZZ2 1709 aa25.22■■□□□ 1.63
ARFGAP1-220ENST00000547204 NAIPQ13075 1403 aa25.22■■□□□ 1.63
ARFGAP1-220ENST00000547204 AFAP1Q8N556 730 aa25.21■■□□□ 1.63
ARFGAP1-220ENST00000547204 TRAPPC8Q9Y2L5 1435 aa25.2■■□□□ 1.62
ARFGAP1-220ENST00000547204 ATP10AO60312 1499 aa25.19■■□□□ 1.62
ARFGAP1-220ENST00000547204 ANKRD30AQ9BXX3 1397 aa25.19■■□□□ 1.62
ARFGAP1-220ENST00000547204 RAB3GAP2Q9H2M9 1393 aa25.19■■□□□ 1.62
ARFGAP1-220ENST00000547204 NCOA1Q15788 1441 aa25.17■■□□□ 1.62
ARFGAP1-220ENST00000547204 RRP7BPQ9NSQ0 103 aa25.17■■□□□ 1.62
ARFGAP1-220ENST00000547204 RIMS1Q86UR5 1692 aaKnown RBP25.16■■□□□ 1.62
ARFGAP1-220ENST00000547204 MLECQ14165 292 aa25.14■■□□□ 1.62
ARFGAP1-220ENST00000547204 MYT1LQ9UL68 1186 aa25.14■■□□□ 1.62
ARFGAP1-220ENST00000547204 PLXNC1O60486 1568 aa25.13■■□□□ 1.61
ARFGAP1-220ENST00000547204 HRCP23327 699 aa25.12■■□□□ 1.61
ARFGAP1-220ENST00000547204 MLH3Q9UHC1 1453 aa25.12■■□□□ 1.61
ARFGAP1-220ENST00000547204 DIP2CQ9Y2E4 1556 aa25.11■■□□□ 1.61
ARFGAP1-220ENST00000547204 RTEL1-TNFRSF6BF6WH68 1400 aa25.11■■□□□ 1.61
ARFGAP1-220ENST00000547204 INO80Q9ULG1 1556 aaPredicted RBP25.1■■□□□ 1.61
ARFGAP1-220ENST00000547204 SPAG9O60271 1321 aaKnown RBP25.09■■□□□ 1.61
ARFGAP1-220ENST00000547204 ABCA6Q8N139 1617 aa25.08■■□□□ 1.61
ARFGAP1-220ENST00000547204 KIF15Q9NS87 1388 aa25.07■■□□□ 1.6
ARFGAP1-220ENST00000547204 ATP7AQ04656 1500 aa25.07■■□□□ 1.6
ARFGAP1-220ENST00000547204 FER1L4A9Z1Z3 1794 aa25.06■■□□□ 1.6
ARFGAP1-220ENST00000547204 REREQ9P2R6 1566 aa25.06■■□□□ 1.6
ARFGAP1-220ENST00000547204 PLPPR3Q6T4P5 718 aa25.05■■□□□ 1.6
ARFGAP1-220ENST00000547204 ANKRD50Q9ULJ7 1429 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms