RNA–Protein interactions for RNA: ENST00000547008.5

LETMD1-206, Transcript of LETM1 domain containing 1, humanhuman

TSL 2 BASIC

Gene LETMD1, Length 1,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-206ENST00000547008 ARHGAP5Q13017 1502 aa22.97■■□□□ 1.27
LETMD1-206ENST00000547008 CD109Q6YHK3 1445 aa22.96■■□□□ 1.27
LETMD1-206ENST00000547008 TCOF1Q13428 1488 aaKnown RBP22.96■■□□□ 1.27
LETMD1-206ENST00000547008 CFDP1Q9UEE9 299 aaPredicted RBP22.95■■□□□ 1.26
LETMD1-206ENST00000547008 CFAP74Q9C0B2 1584 aa22.94■■□□□ 1.26
LETMD1-206ENST00000547008 FAM69CQ0P6D2 419 aa22.93■■□□□ 1.26
LETMD1-206ENST00000547008 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.93■■□□□ 1.26
LETMD1-206ENST00000547008 TRIM26Q12899 539 aaPredicted RBP22.91■■□□□ 1.26
LETMD1-206ENST00000547008 CAMSAP2Q08AD1 1489 aa22.91■■□□□ 1.26
LETMD1-206ENST00000547008 SAMD9LQ8IVG5 1584 aa22.9■■□□□ 1.26
LETMD1-206ENST00000547008 FANCAO15360 1455 aa22.89■■□□□ 1.26
LETMD1-206ENST00000547008 PPRC1Q5VV67 1664 aaKnown RBP22.88■■□□□ 1.25
LETMD1-206ENST00000547008 EFCAB2Q5VUJ9 269 aa22.87■■□□□ 1.25
LETMD1-206ENST00000547008 PLEKHH2Q8IVE3 1493 aa22.87■■□□□ 1.25
LETMD1-206ENST00000547008 TSPOAP1O95153 1857 aa22.86■■□□□ 1.25
LETMD1-206ENST00000547008 NEO1Q92859 1461 aa22.85■■□□□ 1.25
LETMD1-206ENST00000547008 ABCC1P33527 1531 aa22.85■■□□□ 1.25
LETMD1-206ENST00000547008 TEX14Q8IWB6 1497 aa22.85■■□□□ 1.25
LETMD1-206ENST00000547008 FAM50AQ14320 339 aaKnown RBP22.84■■□□□ 1.25
LETMD1-206ENST00000547008 ZNF777Q9ULD5 760 aaPredicted RBP22.84■■□□□ 1.25
LETMD1-206ENST00000547008 DNMT1P26358 1616 aaKnown RBP22.83■■□□□ 1.24
LETMD1-206ENST00000547008 KIAA1107Q9UPP5 1409 aa22.82■■□□□ 1.24
LETMD1-206ENST00000547008 ARHGEF5Q12774 1597 aa22.82■■□□□ 1.24
LETMD1-206ENST00000547008 ZNF644Q9H582 1327 aaPredicted RBP22.82■■□□□ 1.24
LETMD1-206ENST00000547008 SYCP2Q9BX26 1530 aa22.81■■□□□ 1.24
LETMD1-206ENST00000547008 AKNAQ7Z591 1439 aa22.8■■□□□ 1.24
LETMD1-206ENST00000547008 CROCC2H7BZ55 1655 aa22.79■■□□□ 1.24
LETMD1-206ENST00000547008 ADGRL1O94910 1474 aa22.79■■□□□ 1.24
LETMD1-206ENST00000547008 MBD5Q9P267 1494 aa22.77■■□□□ 1.24
LETMD1-206ENST00000547008 DAPK1P53355 1430 aa22.75■■□□□ 1.23
LETMD1-206ENST00000547008 TRHP20396 242 aaPredicted RBP22.75■■□□□ 1.23
LETMD1-206ENST00000547008 ARHGEF12Q9NZN5 1544 aa22.75■■□□□ 1.23
LETMD1-206ENST00000547008 CCDC141Q6ZP82 1450 aa22.75■■□□□ 1.23
LETMD1-206ENST00000547008 SHANK2Q9UPX8 1470 aa22.73■■□□□ 1.23
LETMD1-206ENST00000547008 RSPH4AQ5TD94 716 aa22.72■■□□□ 1.23
LETMD1-206ENST00000547008 ABCC5O15440 1437 aa22.72■■□□□ 1.23
LETMD1-206ENST00000547008 SCAPERQ9BY12 1400 aa22.72■■□□□ 1.23
LETMD1-206ENST00000547008 ADGBQ8N7X0 1667 aa22.7■■□□□ 1.22
LETMD1-206ENST00000547008 HNRNPMP52272 730 aaKnown RBP eCLIP22.7■■□□□ 1.22
LETMD1-206ENST00000547008 MAST1Q9Y2H9 1570 aa22.69■■□□□ 1.22
LETMD1-206ENST00000547008 POGZQ7Z3K3 1410 aa22.68■■□□□ 1.22
LETMD1-206ENST00000547008 PCGF6Q9BYE7 350 aa22.68■■□□□ 1.22
LETMD1-206ENST00000547008 DENND4BO75064 1496 aaPredicted RBP22.67■■□□□ 1.22
LETMD1-206ENST00000547008 ZNF518AQ6AHZ1 1483 aa22.67■■□□□ 1.22
LETMD1-206ENST00000547008 RICTORQ6R327 1708 aa22.67■■□□□ 1.22
LETMD1-206ENST00000547008 PTPRKQ15262 1439 aa22.67■■□□□ 1.22
LETMD1-206ENST00000547008 TRAPPC8Q9Y2L5 1435 aa22.67■■□□□ 1.22
LETMD1-206ENST00000547008 ITGAEP38570 1179 aa22.67■■□□□ 1.22
LETMD1-206ENST00000547008 KDM5CP41229 1560 aa22.66■■□□□ 1.22
LETMD1-206ENST00000547008 C9orf84Q5VXU9 1444 aa22.65■■□□□ 1.22
LETMD1-206ENST00000547008 ADGRL2O95490 1459 aa22.63■■□□□ 1.21
LETMD1-206ENST00000547008 INO80Q9ULG1 1556 aaPredicted RBP22.63■■□□□ 1.21
LETMD1-206ENST00000547008 TSPY4P0CV99 314 aa22.62■■□□□ 1.21
LETMD1-206ENST00000547008 TSPY10P0CW01 314 aa22.62■■□□□ 1.21
LETMD1-206ENST00000547008 FRMPD1Q5SYB0 1578 aa22.62■■□□□ 1.21
LETMD1-206ENST00000547008 ROCK1Q13464 1354 aa22.61■■□□□ 1.21
LETMD1-206ENST00000547008 ZFYVE16Q7Z3T8 1539 aa22.61■■□□□ 1.21
LETMD1-206ENST00000547008 PLXNC1O60486 1568 aa22.6■■□□□ 1.21
LETMD1-206ENST00000547008 HECW2Q9P2P5 1572 aa22.6■■□□□ 1.21
LETMD1-206ENST00000547008 ZMYM4Q5VZL5 1548 aa22.59■■□□□ 1.21
LETMD1-206ENST00000547008 GCC2Q8IWJ2 1684 aa22.59■■□□□ 1.21
LETMD1-206ENST00000547008 RTEL1-TNFRSF6BF6WH68 1400 aa22.59■■□□□ 1.21
LETMD1-206ENST00000547008 ATP7AQ04656 1500 aa22.59■■□□□ 1.21
LETMD1-206ENST00000547008 AFAP1Q8N556 730 aa22.58■■□□□ 1.2
LETMD1-206ENST00000547008 ANKRD30AQ9BXX3 1397 aa22.57■■□□□ 1.2
LETMD1-206ENST00000547008 MLH3Q9UHC1 1453 aa22.56■■□□□ 1.2
LETMD1-206ENST00000547008 CHIC2Q9UKJ5 165 aa22.56■■□□□ 1.2
LETMD1-206ENST00000547008 SPAG9O60271 1321 aaKnown RBP22.56■■□□□ 1.2
LETMD1-206ENST00000547008 KIDINS220Q9ULH0 1771 aa22.56■■□□□ 1.2
LETMD1-206ENST00000547008 HFM1A2PYH4 1435 aa22.56■■□□□ 1.2
LETMD1-206ENST00000547008 NCOA1Q15788 1441 aa22.56■■□□□ 1.2
LETMD1-206ENST00000547008 KDM6BO15054 1643 aa22.55■■□□□ 1.2
LETMD1-206ENST00000547008 COL17A1Q9UMD9 1497 aaPredicted RBP22.54■■□□□ 1.2
LETMD1-206ENST00000547008 RAPGEF3O95398 923 aa22.53■■□□□ 1.2
LETMD1-206ENST00000547008 MAGI2Q86UL8 1455 aa22.51■■□□□ 1.19
LETMD1-206ENST00000547008 NAIPQ13075 1403 aa22.51■■□□□ 1.19
LETMD1-206ENST00000547008 KIF15Q9NS87 1388 aa22.49■■□□□ 1.19
LETMD1-206ENST00000547008 ABCA6Q8N139 1617 aa22.49■■□□□ 1.19
LETMD1-206ENST00000547008 SETD5Q9C0A6 1442 aa22.48■■□□□ 1.19
LETMD1-206ENST00000547008 RRP7BPQ9NSQ0 103 aa22.48■■□□□ 1.19
LETMD1-206ENST00000547008 DUOX2Q9NRD8 1548 aa22.48■■□□□ 1.19
LETMD1-206ENST00000547008 DIP2CQ9Y2E4 1556 aa22.46■■□□□ 1.19
LETMD1-206ENST00000547008 MYT1LQ9UL68 1186 aa22.44■■□□□ 1.18
LETMD1-206ENST00000547008 ARHGEF40Q8TER5 1519 aa22.44■■□□□ 1.18
LETMD1-206ENST00000547008 ERBINQ96RT1 1412 aa22.42■■□□□ 1.18
LETMD1-206ENST00000547008 ANKRD50Q9ULJ7 1429 aa22.42■■□□□ 1.18
LETMD1-206ENST00000547008 RAB3GAP2Q9H2M9 1393 aa22.42■■□□□ 1.18
LETMD1-206ENST00000547008 EIF2AK4Q9P2K8 1649 aaKnown RBP22.41■■□□□ 1.18
LETMD1-206ENST00000547008 YEATS2Q9ULM3 1422 aa22.41■■□□□ 1.18
LETMD1-206ENST00000547008 REREQ9P2R6 1566 aa22.39■■□□□ 1.18
LETMD1-206ENST00000547008 A2MP01023 1474 aa22.39■■□□□ 1.17
LETMD1-206ENST00000547008 HRCP23327 699 aa22.38■■□□□ 1.17
LETMD1-206ENST00000547008 DHX29Q7Z478 1369 aaKnown RBP22.38■■□□□ 1.17
LETMD1-206ENST00000547008 ATP10AO60312 1499 aa22.36■■□□□ 1.17
LETMD1-206ENST00000547008 BCORL1Q5H9F3 1711 aa22.36■■□□□ 1.17
LETMD1-206ENST00000547008 ACIN1Q9UKV3 1341 aaKnown RBP22.36■■□□□ 1.17
LETMD1-206ENST00000547008 UNC13BO14795 1591 aa22.33■■□□□ 1.17
LETMD1-206ENST00000547008 DEPDC5O75140 1603 aa22.32■■□□□ 1.16
LETMD1-206ENST00000547008 RNF17Q9BXT8 1623 aaKnown RBP22.3■■□□□ 1.16
LETMD1-206ENST00000547008 AGLP35573 1532 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms