RNA–Protein interactions for RNA: ENST00000547008.5

LETMD1-206, Transcript of LETM1 domain containing 1, humanhuman

TSL 2 BASIC

Gene LETMD1, Length 1,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-206ENST00000547008 NISCHQ9Y2I1 1504 aa35.28■■■■□ 3.24
LETMD1-206ENST00000547008 CCDC180Q9P1Z9 1646 aa31.16■■■□□ 2.58
LETMD1-206ENST00000547008 ABCC9O60706 1549 aa29.74■■■□□ 2.35
LETMD1-206ENST00000547008 ZCCHC6Q5VYS8 1495 aaKnown RBP29.55■■■□□ 2.32
LETMD1-206ENST00000547008 DCAF1Q9Y4B6 1507 aa29.26■■■□□ 2.27
LETMD1-206ENST00000547008 MYO15BQ96JP2 1530 aa29.15■■■□□ 2.26
LETMD1-206ENST00000547008 NACADO15069 1562 aa29.09■■■□□ 2.25
LETMD1-206ENST00000547008 DCAF8L2P0C7V8 631 aa29.09■■■□□ 2.25
LETMD1-206ENST00000547008 RB1CC1Q8TDY2 1594 aa28.97■■■□□ 2.23
LETMD1-206ENST00000547008 SCRIBQ14160 1630 aa28.42■■■□□ 2.14
LETMD1-206ENST00000547008 UNC13AQ9UPW8 1703 aa28.36■■■□□ 2.13
LETMD1-206ENST00000547008 SHROOM4Q9ULL8 1493 aa28.19■■■□□ 2.1
LETMD1-206ENST00000547008 BICRAQ9NZM4 1560 aa28.05■■■□□ 2.08
LETMD1-206ENST00000547008 PABPN1Q86U42 306 aaKnown RBP eCLIP27.84■■■□□ 2.05
LETMD1-206ENST00000547008 CECR2Q9BXF3 1484 aa27.37■■□□□ 1.97
LETMD1-206ENST00000547008 BAZ1AQ9NRL2 1556 aaPredicted RBP27.32■■□□□ 1.96
LETMD1-206ENST00000547008 SMARCA4P51532 1647 aa27.27■■□□□ 1.96
LETMD1-206ENST00000547008 EIF4G1Q04637 1599 aaKnown RBP27.25■■□□□ 1.95
LETMD1-206ENST00000547008 MROH2BQ7Z745 1585 aa27.19■■□□□ 1.94
LETMD1-206ENST00000547008 RSF1Q96T23 1441 aaPredicted RBP27.1■■□□□ 1.93
LETMD1-206ENST00000547008 PEG3Q9GZU2 1588 aa27■■□□□ 1.91
LETMD1-206ENST00000547008 CC2D2AQ9P2K1 1620 aa26.98■■□□□ 1.91
LETMD1-206ENST00000547008 SMARCA2P51531 1590 aa26.95■■□□□ 1.91
LETMD1-206ENST00000547008 WIZO95785 1651 aa26.95■■□□□ 1.9
LETMD1-206ENST00000547008 ATAD2BQ9ULI0 1458 aa26.9■■□□□ 1.9
LETMD1-206ENST00000547008 SUPT5HO00267 1087 aaKnown RBP26.84■■□□□ 1.89
LETMD1-206ENST00000547008 NCAPD3P42695 1498 aa26.8■■□□□ 1.88
LETMD1-206ENST00000547008 HMGXB3Q12766 1538 aa26.78■■□□□ 1.88
LETMD1-206ENST00000547008 BAZ1BQ9UIG0 1483 aaKnown RBP26.74■■□□□ 1.87
LETMD1-206ENST00000547008 TOP2AP11388 1531 aaKnown RBP26.72■■□□□ 1.87
LETMD1-206ENST00000547008 DNAJC5BQ9UF47 199 aa26.62■■□□□ 1.85
LETMD1-206ENST00000547008 CCDC88BA6NC98 1476 aa26.35■■□□□ 1.81
LETMD1-206ENST00000547008 CFTRP13569 1480 aa26.04■■□□□ 1.76
LETMD1-206ENST00000547008 LAMC3Q9Y6N6 1575 aa26.03■■□□□ 1.76
LETMD1-206ENST00000547008 CADPSQ9ULU8 1353 aa26.03■■□□□ 1.76
LETMD1-206ENST00000547008 PRDM2Q13029 1718 aa26.02■■□□□ 1.76
LETMD1-206ENST00000547008 NESP48681 1621 aa25.93■■□□□ 1.74
LETMD1-206ENST00000547008 PDS5BQ9NTI5 1447 aa25.79■■□□□ 1.72
LETMD1-206ENST00000547008 FANCD2Q9BXW9 1451 aa25.75■■□□□ 1.71
LETMD1-206ENST00000547008 KIF21AQ7Z4S6 1674 aa25.73■■□□□ 1.71
LETMD1-206ENST00000547008 CEP164Q9UPV0 1460 aa25.67■■□□□ 1.7
LETMD1-206ENST00000547008 ABCC8Q09428 1581 aa25.61■■□□□ 1.69
LETMD1-206ENST00000547008 ERCC6Q03468 1493 aa25.6■■□□□ 1.69
LETMD1-206ENST00000547008 WRNQ14191 1432 aaPredicted RBP eCLIP25.55■■□□□ 1.68
LETMD1-206ENST00000547008 MRC2Q9UBG0 1479 aa25.5■■□□□ 1.67
LETMD1-206ENST00000547008 DNMBPQ6XZF7 1577 aa25.49■■□□□ 1.67
LETMD1-206ENST00000547008 BIVM-ERCC5R4GMW8 1640 aa25.48■■□□□ 1.67
LETMD1-206ENST00000547008 CUX1P39880 1505 aa25.48■■□□□ 1.67
LETMD1-206ENST00000547008 SYNJ1O43426 1573 aa25.47■■□□□ 1.67
LETMD1-206ENST00000547008 THOC2Q8NI27 1593 aaKnown RBP25.47■■□□□ 1.67
LETMD1-206ENST00000547008 TOP2BQ02880 1626 aa25.47■■□□□ 1.67
LETMD1-206ENST00000547008 URB2Q14146 1524 aaKnown RBP25.46■■□□□ 1.67
LETMD1-206ENST00000547008 CHIC1Q5VXU3 224 aa25.45■■□□□ 1.67
LETMD1-206ENST00000547008 TOPBP1Q92547 1522 aa25.42■■□□□ 1.66
LETMD1-206ENST00000547008 WDR62O43379 1518 aa25.41■■□□□ 1.66
LETMD1-206ENST00000547008 TRIM41Q8WV44 630 aa25.34■■□□□ 1.65
LETMD1-206ENST00000547008 FGD5Q6ZNL6 1462 aa25.29■■□□□ 1.64
LETMD1-206ENST00000547008 POLA1P09884 1462 aaPredicted RBP25.25■■□□□ 1.63
LETMD1-206ENST00000547008 CUX2O14529 1486 aa25.14■■□□□ 1.62
LETMD1-206ENST00000547008 WDR97A6NE52 1622 aa25.13■■□□□ 1.61
LETMD1-206ENST00000547008 TARBP1Q13395 1621 aaKnown RBP25.13■■□□□ 1.61
LETMD1-206ENST00000547008 SOGA1O94964 1423 aa25.12■■□□□ 1.61
LETMD1-206ENST00000547008 IFT140Q96RY7 1462 aa25.11■■□□□ 1.61
LETMD1-206ENST00000547008 RAD54L2Q9Y4B4 1467 aa25.1■■□□□ 1.61
LETMD1-206ENST00000547008 ABCA10Q8WWZ4 1543 aa25.09■■□□□ 1.61
LETMD1-206ENST00000547008 KIF27Q86VH2 1401 aa24.97■■□□□ 1.59
LETMD1-206ENST00000547008 ABCA5Q8WWZ7 1642 aa24.96■■□□□ 1.59
LETMD1-206ENST00000547008 EEA1Q15075 1411 aa24.95■■□□□ 1.59
LETMD1-206ENST00000547008 EIF4G3O43432 1585 aaKnown RBP24.91■■□□□ 1.58
LETMD1-206ENST00000547008 ZNF608Q9ULD9 1512 aaPredicted RBP24.9■■□□□ 1.58
LETMD1-206ENST00000547008 RUSC2Q8N2Y8 1516 aa24.9■■□□□ 1.58
LETMD1-206ENST00000547008 TDRD9Q8NDG6 1382 aaKnown RBP24.88■■□□□ 1.57
LETMD1-206ENST00000547008 GAPVD1Q14C86 1478 aa24.87■■□□□ 1.57
LETMD1-206ENST00000547008 PBRM1Q86U86 1689 aa24.86■■□□□ 1.57
LETMD1-206ENST00000547008 AQRO60306 1485 aaKnown RBP eCLIP24.83■■□□□ 1.571e-6■■□□□ 12.7
LETMD1-206ENST00000547008 ERICH3Q5RHP9 1530 aa24.81■■□□□ 1.56
LETMD1-206ENST00000547008 GRIN2BQ13224 1484 aa24.79■■□□□ 1.56
LETMD1-206ENST00000547008 FAM9AQ8IZU1 332 aaPredicted RBP24.77■■□□□ 1.56
LETMD1-206ENST00000547008 CUL7Q14999 1698 aa24.75■■□□□ 1.55
LETMD1-206ENST00000547008 IGF1RP08069 1367 aa24.74■■□□□ 1.55
LETMD1-206ENST00000547008 CSRNP3Q8WYN3 585 aa24.74■■□□□ 1.55
LETMD1-206ENST00000547008 MAGI1Q96QZ7 1491 aaPredicted RBP24.67■■□□□ 1.54
LETMD1-206ENST00000547008 ADAMTS12P58397 1594 aa24.67■■□□□ 1.54
LETMD1-206ENST00000547008 KIF21BO75037 1637 aa24.67■■□□□ 1.54
LETMD1-206ENST00000547008 SNAPC4Q5SXM2 1469 aa24.66■■□□□ 1.54
LETMD1-206ENST00000547008 PRXQ9BXM0 1461 aa24.65■■□□□ 1.54
LETMD1-206ENST00000547008 CARMIL1Q5VZK9 1371 aa24.63■■□□□ 1.53
LETMD1-206ENST00000547008 FHAD1B1AJZ9 1412 aa24.61■■□□□ 1.53
LETMD1-206ENST00000547008 RAPGEF2Q9Y4G8 1499 aa24.58■■□□□ 1.53
LETMD1-206ENST00000547008 SYNJ2O15056 1496 aa24.56■■□□□ 1.52
LETMD1-206ENST00000547008 GOLGA3Q08378 1498 aa24.54■■□□□ 1.52
LETMD1-206ENST00000547008 CHD1O14646 1710 aa24.48■■□□□ 1.51
LETMD1-206ENST00000547008 GRIN2AQ12879 1464 aa24.48■■□□□ 1.51
LETMD1-206ENST00000547008 CHMP7Q8WUX9 453 aaPredicted RBP24.43■■□□□ 1.5
LETMD1-206ENST00000547008 CTTNBP2Q8WZ74 1663 aa24.4■■□□□ 1.5
LETMD1-206ENST00000547008 LOC105371045A0A1W2PR82 267 aa24.37■■□□□ 1.49
LETMD1-206ENST00000547008 FBLN2P98095 1184 aa24.37■■□□□ 1.49
LETMD1-206ENST00000547008 EHMT2Q96KQ7 1210 aa24.37■■□□□ 1.49
LETMD1-206ENST00000547008 UBTFP17480 764 aaKnown RBP24.34■■□□□ 1.49
LETMD1-206ENST00000547008 NUP160Q12769 1436 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 137.2 ms