RNA–Protein interactions for RNA: ENST00000543510.1

TMEM258-207, Transcript of transmembrane protein 258, humanhuman

TSL 2 BASIC

Gene TMEM258, Length 1,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-207ENST00000543510 ARHGAP5Q13017 1502 aa22.62■■□□□ 1.21
TMEM258-207ENST00000543510 MIA2Q96PC5 1412 aa22.6■■□□□ 1.21
TMEM258-207ENST00000543510 ZNF644Q9H582 1327 aaPredicted RBP22.59■■□□□ 1.21
TMEM258-207ENST00000543510 FAM69CQ0P6D2 419 aa22.58■■□□□ 1.21
TMEM258-207ENST00000543510 DIP2BQ9P265 1576 aa22.58■■□□□ 1.2
TMEM258-207ENST00000543510 CAMSAP2Q08AD1 1489 aa22.56■■□□□ 1.2
TMEM258-207ENST00000543510 TSPOAP1O95153 1857 aa22.56■■□□□ 1.2
TMEM258-207ENST00000543510 PLCH2O75038 1416 aa22.56■■□□□ 1.2
TMEM258-207ENST00000543510 CD109Q6YHK3 1445 aa22.55■■□□□ 1.2
TMEM258-207ENST00000543510 TCOF1Q13428 1488 aaKnown RBP22.54■■□□□ 1.2
TMEM258-207ENST00000543510 KIF13AQ9H1H9 1805 aa22.53■■□□□ 1.2
TMEM258-207ENST00000543510 EFCAB2Q5VUJ9 269 aa22.52■■□□□ 1.2
TMEM258-207ENST00000543510 SAMD9LQ8IVG5 1584 aa22.52■■□□□ 1.2
TMEM258-207ENST00000543510 GLI2P10070 1586 aa22.52■■□□□ 1.2
TMEM258-207ENST00000543510 MAP3K4Q9Y6R4 1608 aa22.5■■□□□ 1.19
TMEM258-207ENST00000543510 FANCAO15360 1455 aa22.49■■□□□ 1.19
TMEM258-207ENST00000543510 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.49■■□□□ 1.193e-7■□□□□ 11
TMEM258-207ENST00000543510 HNRNPMP52272 730 aaKnown RBP eCLIP22.48■■□□□ 1.19
TMEM258-207ENST00000543510 ARAP3Q8WWN8 1544 aa22.47■■□□□ 1.19
TMEM258-207ENST00000543510 TRHP20396 242 aaPredicted RBP22.46■■□□□ 1.19
TMEM258-207ENST00000543510 SYCP2Q9BX26 1530 aa22.45■■□□□ 1.18
TMEM258-207ENST00000543510 ZEB1P37275 1124 aaPredicted RBP22.45■■□□□ 1.18
TMEM258-207ENST00000543510 CHIC2Q9UKJ5 165 aa22.44■■□□□ 1.18
TMEM258-207ENST00000543510 DNMT1P26358 1616 aaKnown RBP22.44■■□□□ 1.18
TMEM258-207ENST00000543510 CFAP74Q9C0B2 1584 aa22.44■■□□□ 1.18
TMEM258-207ENST00000543510 DAPK1P53355 1430 aa22.42■■□□□ 1.18
TMEM258-207ENST00000543510 PLEKHH2Q8IVE3 1493 aa22.41■■□□□ 1.18
TMEM258-207ENST00000543510 ABCC1P33527 1531 aa22.41■■□□□ 1.18
TMEM258-207ENST00000543510 ADGRL1O94910 1474 aa22.4■■□□□ 1.18
TMEM258-207ENST00000543510 ABCC5O15440 1437 aa22.39■■□□□ 1.18
TMEM258-207ENST00000543510 PTPRKQ15262 1439 aa22.39■■□□□ 1.18
TMEM258-207ENST00000543510 AKNAQ7Z591 1439 aa22.39■■□□□ 1.18
TMEM258-207ENST00000543510 CROCC2H7BZ55 1655 aa22.39■■□□□ 1.17
TMEM258-207ENST00000543510 CCER1Q8TC90 406 aaPredicted RBP22.38■■□□□ 1.17
TMEM258-207ENST00000543510 PPRC1Q5VV67 1664 aaKnown RBP22.38■■□□□ 1.17
TMEM258-207ENST00000543510 ARHGEF12Q9NZN5 1544 aa22.37■■□□□ 1.17
TMEM258-207ENST00000543510 ARHGEF5Q12774 1597 aa22.36■■□□□ 1.17
TMEM258-207ENST00000543510 SCAPERQ9BY12 1400 aa22.36■■□□□ 1.17
TMEM258-207ENST00000543510 CCDC141Q6ZP82 1450 aa22.36■■□□□ 1.17
TMEM258-207ENST00000543510 MBD5Q9P267 1494 aa22.36■■□□□ 1.17
TMEM258-207ENST00000543510 TSPY4P0CV99 314 aa22.36■■□□□ 1.17
TMEM258-207ENST00000543510 TSPY10P0CW01 314 aa22.36■■□□□ 1.17
TMEM258-207ENST00000543510 KIAA1107Q9UPP5 1409 aa22.35■■□□□ 1.17
TMEM258-207ENST00000543510 TEX14Q8IWB6 1497 aa22.34■■□□□ 1.17
TMEM258-207ENST00000543510 RRP7BPQ9NSQ0 103 aa22.33■■□□□ 1.17
TMEM258-207ENST00000543510 MYT1LQ9UL68 1186 aa22.33■■□□□ 1.17
TMEM258-207ENST00000543510 NEO1Q92859 1461 aa22.33■■□□□ 1.17
TMEM258-207ENST00000543510 ADGBQ8N7X0 1667 aa22.33■■□□□ 1.17
TMEM258-207ENST00000543510 TRAPPC8Q9Y2L5 1435 aa22.33■■□□□ 1.16
TMEM258-207ENST00000543510 RSPH4AQ5TD94 716 aa22.32■■□□□ 1.16
TMEM258-207ENST00000543510 C9orf84Q5VXU9 1444 aa22.31■■□□□ 1.16
TMEM258-207ENST00000543510 AFAP1Q8N556 730 aa22.3■■□□□ 1.16
TMEM258-207ENST00000543510 SHANK2Q9UPX8 1470 aa22.27■■□□□ 1.15
TMEM258-207ENST00000543510 SPAG9O60271 1321 aaKnown RBP22.25■■□□□ 1.15
TMEM258-207ENST00000543510 RAPGEF3O95398 923 aa22.25■■□□□ 1.15
TMEM258-207ENST00000543510 ANKRD30AQ9BXX3 1397 aa22.25■■□□□ 1.15
TMEM258-207ENST00000543510 DENND4BO75064 1496 aaPredicted RBP22.25■■□□□ 1.15
TMEM258-207ENST00000543510 SETD5Q9C0A6 1442 aa22.24■■□□□ 1.15
TMEM258-207ENST00000543510 GCC2Q8IWJ2 1684 aa22.23■■□□□ 1.15
TMEM258-207ENST00000543510 ZNF518AQ6AHZ1 1483 aa22.23■■□□□ 1.15
TMEM258-207ENST00000543510 POGZQ7Z3K3 1410 aa22.22■■□□□ 1.15
TMEM258-207ENST00000543510 MAST1Q9Y2H9 1570 aa22.22■■□□□ 1.15
TMEM258-207ENST00000543510 ROCK1Q13464 1354 aa22.22■■□□□ 1.15
TMEM258-207ENST00000543510 HFM1A2PYH4 1435 aa22.21■■□□□ 1.15
TMEM258-207ENST00000543510 RICTORQ6R327 1708 aa22.21■■□□□ 1.15
TMEM258-207ENST00000543510 RAB3GAP2Q9H2M9 1393 aa22.21■■□□□ 1.15
TMEM258-207ENST00000543510 NAIPQ13075 1403 aa22.2■■□□□ 1.14
TMEM258-207ENST00000543510 NCOA1Q15788 1441 aa22.2■■□□□ 1.14
TMEM258-207ENST00000543510 ADGRL2O95490 1459 aa22.2■■□□□ 1.14
TMEM258-207ENST00000543510 ATP7AQ04656 1500 aa22.18■■□□□ 1.14
TMEM258-207ENST00000543510 ZFYVE16Q7Z3T8 1539 aa22.17■■□□□ 1.14
TMEM258-207ENST00000543510 KIF15Q9NS87 1388 aa22.17■■□□□ 1.14
TMEM258-207ENST00000543510 INO80Q9ULG1 1556 aaPredicted RBP22.16■■□□□ 1.14
TMEM258-207ENST00000543510 KDM6BO15054 1643 aa22.16■■□□□ 1.14
TMEM258-207ENST00000543510 KDM5CP41229 1560 aa22.15■■□□□ 1.14
TMEM258-207ENST00000543510 HECW2Q9P2P5 1572 aa22.15■■□□□ 1.14
TMEM258-207ENST00000543510 PLXNC1O60486 1568 aa22.15■■□□□ 1.14
TMEM258-207ENST00000543510 KIDINS220Q9ULH0 1771 aa22.14■■□□□ 1.14
TMEM258-207ENST00000543510 FRMPD1Q5SYB0 1578 aa22.14■■□□□ 1.13
TMEM258-207ENST00000543510 RTEL1-TNFRSF6BF6WH68 1400 aa22.13■■□□□ 1.13
TMEM258-207ENST00000543510 COL17A1Q9UMD9 1497 aaPredicted RBP22.1■■□□□ 1.13
TMEM258-207ENST00000543510 TRIM52Q96A61 297 aa22.1■■□□□ 1.13
TMEM258-207ENST00000543510 ANKRD50Q9ULJ7 1429 aa22.09■■□□□ 1.13
TMEM258-207ENST00000543510 MLH3Q9UHC1 1453 aa22.08■■□□□ 1.13
TMEM258-207ENST00000543510 DUOX2Q9NRD8 1548 aa22.08■■□□□ 1.12
TMEM258-207ENST00000543510 ABCA6Q8N139 1617 aa22.07■■□□□ 1.12
TMEM258-207ENST00000543510 DHX57Q6P158 1386 aaKnown RBP22.06■■□□□ 1.12
TMEM258-207ENST00000543510 ZMYM4Q5VZL5 1548 aa22.05■■□□□ 1.12
TMEM258-207ENST00000543510 YEATS2Q9ULM3 1422 aa22.03■■□□□ 1.12
TMEM258-207ENST00000543510 CLSPNQ9HAW4 1339 aa22.03■■□□□ 1.12
TMEM258-207ENST00000543510 DIP2CQ9Y2E4 1556 aa22.02■■□□□ 1.12
TMEM258-207ENST00000543510 A2MP01023 1474 aa22.01■■□□□ 1.11
TMEM258-207ENST00000543510 ERBINQ96RT1 1412 aa22■■□□□ 1.11
TMEM258-207ENST00000543510 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22■■□□□ 1.11
TMEM258-207ENST00000543510 MAGI2Q86UL8 1455 aa21.98■■□□□ 1.11
TMEM258-207ENST00000543510 DHX29Q7Z478 1369 aaKnown RBP21.98■■□□□ 1.11
TMEM258-207ENST00000543510 KIF3BO15066 747 aa21.97■■□□□ 1.11
TMEM258-207ENST00000543510 NUP155O75694 1391 aa21.94■■□□□ 1.1
TMEM258-207ENST00000543510 ARHGEF40Q8TER5 1519 aa21.94■■□□□ 1.1
TMEM258-207ENST00000543510 EIF2AK4Q9P2K8 1649 aaKnown RBP21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms