RNA–Protein interactions for RNA: ENST00000542128.5

KDM3A-216, Transcript of lysine demethylase 3A, humanhuman

TSL 5 BASIC

Gene KDM3A, Length 4,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-216ENST00000542128 FHAD1B1AJZ9 1412 aa16.2■□□□□ 0.18
KDM3A-216ENST00000542128 SENP3-EIF4A1A0A087X0R7 540 aa16.19■□□□□ 0.18
KDM3A-216ENST00000542128 ARID3AQ99856 593 aa16.18■□□□□ 0.18
KDM3A-216ENST00000542128 POGKQ9P215 609 aa16.18■□□□□ 0.18
KDM3A-216ENST00000542128 ZMYND15Q9H091 742 aa16.17■□□□□ 0.18
KDM3A-216ENST00000542128 HDGFP51858 240 aaKnown RBP16.17■□□□□ 0.18
KDM3A-216ENST00000542128 TCERG1O14776 1098 aaKnown RBP16.15■□□□□ 0.18
KDM3A-216ENST00000542128 KANK1Q14678 1352 aa16.13■□□□□ 0.17
KDM3A-216ENST00000542128 FAM69CQ0P6D2 419 aa16.13■□□□□ 0.17
KDM3A-216ENST00000542128 PTPRGP23470 1445 aa16.12■□□□□ 0.17
KDM3A-216ENST00000542128 RAD54L2Q9Y4B4 1467 aa16.12■□□□□ 0.17
KDM3A-216ENST00000542128 DNTTIP2Q5QJE6 756 aaKnown RBP16.1■□□□□ 0.17
KDM3A-216ENST00000542128 KIF3BO15066 747 aa16.1■□□□□ 0.17
KDM3A-216ENST00000542128 FAM43AQ8N2R8 423 aa16.09■□□□□ 0.17
KDM3A-216ENST00000542128 FGD5Q6ZNL6 1462 aa16.09■□□□□ 0.17
KDM3A-216ENST00000542128 MSNP26038 577 aaKnown RBP16.08■□□□□ 0.16
KDM3A-216ENST00000542128 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.08■□□□□ 0.16
KDM3A-216ENST00000542128 GOLGA6L3A6NEY3 463 aa16.07■□□□□ 0.16
KDM3A-216ENST00000542128 SIN3AQ96ST3 1273 aa16.07■□□□□ 0.16
KDM3A-216ENST00000542128 GZF1Q9H116 711 aaPredicted RBP16.07■□□□□ 0.16
KDM3A-216ENST00000542128 RGS3P49796 1198 aa16.06■□□□□ 0.16
KDM3A-216ENST00000542128 AQRO60306 1485 aaKnown RBP eCLIP16.06■□□□□ 0.163e-7■■■■□ 20.7
KDM3A-216ENST00000542128 FRAT1Q92837 279 aaPredicted RBP16.06■□□□□ 0.16
KDM3A-216ENST00000542128 CFTRP13569 1480 aa16.06■□□□□ 0.16
KDM3A-216ENST00000542128 EIF4G2P78344 907 aaKnown RBP eCLIP16.05■□□□□ 0.16
KDM3A-216ENST00000542128 HNRNPMP52272 730 aaKnown RBP eCLIP16.05■□□□□ 0.163e-8■■■■□ 20.7
KDM3A-216ENST00000542128 HMGXB3Q12766 1538 aa16.05■□□□□ 0.16
KDM3A-216ENST00000542128 SLC4A3P48751 1232 aa16.04■□□□□ 0.16
KDM3A-216ENST00000542128 SPAG9O60271 1321 aaKnown RBP16.04■□□□□ 0.16
KDM3A-216ENST00000542128 RUSC2Q8N2Y8 1516 aa16.04■□□□□ 0.16
KDM3A-216ENST00000542128 RRP9O43818 475 aaKnown RBP16.03■□□□□ 0.16
KDM3A-216ENST00000542128 PDE4AP27815 886 aa16.03■□□□□ 0.16
KDM3A-216ENST00000542128 SAFB2Q14151 953 aaKnown RBP eCLIP16.03■□□□□ 0.16
KDM3A-216ENST00000542128 UNC13AQ9UPW8 1703 aa16.02■□□□□ 0.16
KDM3A-216ENST00000542128 FMN1Q68DA7 1419 aa16.02■□□□□ 0.16
KDM3A-216ENST00000542128 NFKBIBQ15653 356 aa16.02■□□□□ 0.16
KDM3A-216ENST00000542128 GAPVD1Q14C86 1478 aa16.02■□□□□ 0.15
KDM3A-216ENST00000542128 RAPGEF2Q9Y4G8 1499 aa16.02■□□□□ 0.15
KDM3A-216ENST00000542128 PTMAP06454 111 aaKnown RBP16.01■□□□□ 0.15
KDM3A-216ENST00000542128 MYH16Q9H6N6 1097 aa16.01■□□□□ 0.15
KDM3A-216ENST00000542128 GOLGA6L22H0YM25 854 aa16.01■□□□□ 0.15
KDM3A-216ENST00000542128 CARD11Q9BXL7 1154 aa16.01■□□□□ 0.15
KDM3A-216ENST00000542128 SLKQ9H2G2 1235 aaPredicted RBP16.01■□□□□ 0.15
KDM3A-216ENST00000542128 WASHC2CQ9Y4E1 1318 aa16■□□□□ 0.15
KDM3A-216ENST00000542128 STK26Q9P289 416 aa15.99■□□□□ 0.15
KDM3A-216ENST00000542128 WDR43Q15061 677 aaKnown RBP eCLIP15.99■□□□□ 0.15
KDM3A-216ENST00000542128 FHOD3Q2V2M9 1422 aa15.98■□□□□ 0.15
KDM3A-216ENST00000542128 PDE4CQ08493 712 aa15.97■□□□□ 0.15
KDM3A-216ENST00000542128 DCAF11Q8TEB1 546 aa15.97■□□□□ 0.15
KDM3A-216ENST00000542128 SOX12O15370 315 aa15.96■□□□□ 0.15
KDM3A-216ENST00000542128 CDCA8Q53HL2 280 aa15.96■□□□□ 0.15
KDM3A-216ENST00000542128 KANK4Q5T7N3 995 aaPredicted RBP15.96■□□□□ 0.15
KDM3A-216ENST00000542128 EID1Q9Y6B2 187 aa15.96■□□□□ 0.15
KDM3A-216ENST00000542128 IGF1RP08069 1367 aa15.95■□□□□ 0.14
KDM3A-216ENST00000542128 MRC2Q9UBG0 1479 aa15.94■□□□□ 0.14
KDM3A-216ENST00000542128 PKD2Q13563 968 aa15.93■□□□□ 0.14
KDM3A-216ENST00000542128 FAM13BQ9NYF5 915 aa15.93■□□□□ 0.14
KDM3A-216ENST00000542128 SRPK2P78362 688 aaKnown RBP15.92■□□□□ 0.14
KDM3A-216ENST00000542128 SPRYD3Q8NCJ5 442 aa15.92■□□□□ 0.14
KDM3A-216ENST00000542128 RSPH4AQ5TD94 716 aa15.9■□□□□ 0.14
KDM3A-216ENST00000542128 KNSTRNQ9Y448 316 aa15.9■□□□□ 0.14
KDM3A-216ENST00000542128 NUDCQ9Y266 331 aa15.89■□□□□ 0.13
KDM3A-216ENST00000542128 NUTM2DQ5VT03 806 aaPredicted RBP15.89■□□□□ 0.13
KDM3A-216ENST00000542128 NUP155O75694 1391 aa15.88■□□□□ 0.13
KDM3A-216ENST00000542128 FOXD1Q16676 465 aa15.87■□□□□ 0.13
KDM3A-216ENST00000542128 TOPBP1Q92547 1522 aa15.87■□□□□ 0.13
KDM3A-216ENST00000542128 ANKRD30AQ9BXX3 1397 aa15.86■□□□□ 0.13
KDM3A-216ENST00000542128 CFAP53Q96M91 514 aa15.86■□□□□ 0.13
KDM3A-216ENST00000542128 ARHGAP35Q9NRY4 1499 aa15.86■□□□□ 0.13
KDM3A-216ENST00000542128 VPS8Q8N3P4 1428 aa15.84■□□□□ 0.13
KDM3A-216ENST00000542128 DHX57Q6P158 1386 aaKnown RBP15.84■□□□□ 0.13
KDM3A-216ENST00000542128 MS4A1P11836 297 aa15.83■□□□□ 0.13
KDM3A-216ENST00000542128 FRAT2O75474 233 aaPredicted RBP15.82■□□□□ 0.12
KDM3A-216ENST00000542128 POLA1P09884 1462 aaPredicted RBP15.82■□□□□ 0.12
KDM3A-216ENST00000542128 GRIN2BQ13224 1484 aa15.82■□□□□ 0.12
KDM3A-216ENST00000542128 TPM2P07951 284 aa15.82■□□□□ 0.12
KDM3A-216ENST00000542128 CCDC9Q9Y3X0 531 aaKnown RBP15.82■□□□□ 0.12
KDM3A-216ENST00000542128 RCAN3Q9UKA8 241 aa15.82■□□□□ 0.12
KDM3A-216ENST00000542128 MAP7D2Q96T17 732 aa15.81■□□□□ 0.12
KDM3A-216ENST00000542128 TNNT3P45378 269 aaPredicted RBP15.81■□□□□ 0.12
KDM3A-216ENST00000542128 CCDC18Q5T9S5 1454 aa15.8■□□□□ 0.12
KDM3A-216ENST00000542128 C11orf95C9JLR9 678 aaPredicted RBP15.8■□□□□ 0.12
KDM3A-216ENST00000542128 IFT140Q96RY7 1462 aa15.8■□□□□ 0.12
KDM3A-216ENST00000542128 NUTM2FA1L443 756 aa15.8■□□□□ 0.12
KDM3A-216ENST00000542128 NPHP1O15259 732 aa15.8■□□□□ 0.12
KDM3A-216ENST00000542128 LAMC3Q9Y6N6 1575 aa15.78■□□□□ 0.12
KDM3A-216ENST00000542128 ZBED9Q6R2W3 1325 aa15.78■□□□□ 0.12
KDM3A-216ENST00000542128 RBM10P98175 930 aaKnown RBP15.77■□□□□ 0.12
KDM3A-216ENST00000542128 CHAF1AQ13111 956 aaPredicted RBP15.77■□□□□ 0.12
KDM3A-216ENST00000542128 SYNJ1O43426 1573 aa15.76■□□□□ 0.11
KDM3A-216ENST00000542128 HSCBQ8IWL3 235 aa15.76■□□□□ 0.11
KDM3A-216ENST00000542128 CUX1P39880 1505 aa15.76■□□□□ 0.11
KDM3A-216ENST00000542128 CSB-PGBD3P0DP91 1061 aa15.76■□□□□ 0.11
KDM3A-216ENST00000542128 NEUROD2Q15784 382 aa15.76■□□□□ 0.11
KDM3A-216ENST00000542128 EXOC6Q8TAG9 804 aa15.76■□□□□ 0.11
KDM3A-216ENST00000542128 HSP90AB1P08238 724 aaKnown RBP15.75■□□□□ 0.11
KDM3A-216ENST00000542128 PRG4Q92954 1404 aaPredicted RBP15.75■□□□□ 0.11
KDM3A-216ENST00000542128 TMF1P82094 1093 aa15.74■□□□□ 0.11
KDM3A-216ENST00000542128 U2SURPO15042 1029 aaKnown RBP15.74■□□□□ 0.11
KDM3A-216ENST00000542128 GBP4Q96PP9 640 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms