RNA–Protein interactions for RNA: ENST00000540638.6

EPB41L3-204, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EPB41L3, Length 3,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-204ENST00000540638 PBRM1Q86U86 1689 aa23.84■■□□□ 1.41
EPB41L3-204ENST00000540638 FKBP8Q14318 412 aa23.83■■□□□ 1.41
EPB41L3-204ENST00000540638 CARMIL2Q6F5E8 1435 aa23.83■■□□□ 1.41
EPB41L3-204ENST00000540638 HECW1Q76N89 1606 aa23.83■■□□□ 1.41
EPB41L3-204ENST00000540638 HNRNPUQ00839 825 aaKnown RBP eCLIP23.82■■□□□ 1.4
EPB41L3-204ENST00000540638 PKD2Q13563 968 aa23.8■■□□□ 1.4
EPB41L3-204ENST00000540638 SUPT16HQ9Y5B9 1047 aaKnown RBP23.79■■□□□ 1.4
EPB41L3-204ENST00000540638 FAM9BQ8IZU0 186 aa23.79■■□□□ 1.4
EPB41L3-204ENST00000540638 UGGT2Q9NYU1 1516 aa23.78■■□□□ 1.4
EPB41L3-204ENST00000540638 RGL3Q3MIN7 710 aa23.74■■□□□ 1.39
EPB41L3-204ENST00000540638 IRX6P78412 446 aaPredicted RBP23.73■■□□□ 1.39
EPB41L3-204ENST00000540638 LRRIQ1Q96JM4 1722 aa23.73■■□□□ 1.39
EPB41L3-204ENST00000540638 NUP153P49790 1475 aaKnown RBP23.72■■□□□ 1.39
EPB41L3-204ENST00000540638 EIF4G3O43432 1585 aaKnown RBP23.72■■□□□ 1.39
EPB41L3-204ENST00000540638 DISP1Q96F81 1524 aa23.72■■□□□ 1.39
EPB41L3-204ENST00000540638 DAPK1P53355 1430 aa23.69■■□□□ 1.38
EPB41L3-204ENST00000540638 NBPF8Q3BBV2 869 aa23.69■■□□□ 1.38
EPB41L3-204ENST00000540638 WDR62O43379 1518 aa23.68■■□□□ 1.38
EPB41L3-204ENST00000540638 MIA2Q96PC5 1412 aa23.67■■□□□ 1.38
EPB41L3-204ENST00000540638 ABCC5O15440 1437 aa23.67■■□□□ 1.38
EPB41L3-204ENST00000540638 NUP155O75694 1391 aa23.67■■□□□ 1.38
EPB41L3-204ENST00000540638 SYNJ2O15056 1496 aa23.67■■□□□ 1.38
EPB41L3-204ENST00000540638 PTPRGP23470 1445 aa23.66■■□□□ 1.38
EPB41L3-204ENST00000540638 WASHC2AQ641Q2 1341 aa23.66■■□□□ 1.38
EPB41L3-204ENST00000540638 TROQ12816 1431 aaPredicted RBP23.64■■□□□ 1.38
EPB41L3-204ENST00000540638 MRS2Q9HD23 443 aa23.64■■□□□ 1.38
EPB41L3-204ENST00000540638 KIAA0556O60303 1618 aa23.63■■□□□ 1.37
EPB41L3-204ENST00000540638 C11orf95C9JLR9 678 aaPredicted RBP23.61■■□□□ 1.37
EPB41L3-204ENST00000540638 KDM6BO15054 1643 aa23.61■■□□□ 1.37
EPB41L3-204ENST00000540638 DCAF11Q8TEB1 546 aa23.6■■□□□ 1.37
EPB41L3-204ENST00000540638 ANKRD30AQ9BXX3 1397 aa23.6■■□□□ 1.37
EPB41L3-204ENST00000540638 MAGI1Q96QZ7 1491 aaPredicted RBP23.6■■□□□ 1.37
EPB41L3-204ENST00000540638 CCER2I3L3R5 266 aa23.56■■□□□ 1.36
EPB41L3-204ENST00000540638 RAPGEF6Q8TEU7 1601 aa23.56■■□□□ 1.36
EPB41L3-204ENST00000540638 CARD11Q9BXL7 1154 aa23.56■■□□□ 1.36
EPB41L3-204ENST00000540638 ARHGEF11O15085 1522 aa23.55■■□□□ 1.36
EPB41L3-204ENST00000540638 CCDC184Q52MB2 194 aa23.55■■□□□ 1.36
EPB41L3-204ENST00000540638 CEP170Q5SW79 1584 aa23.54■■□□□ 1.36
EPB41L3-204ENST00000540638 CAMSAP2Q08AD1 1489 aa23.53■■□□□ 1.36
EPB41L3-204ENST00000540638 TCOF1Q13428 1488 aaKnown RBP23.52■■□□□ 1.36
EPB41L3-204ENST00000540638 GPATCH8Q9UKJ3 1502 aaKnown RBP23.51■■□□□ 1.35
EPB41L3-204ENST00000540638 ANKRD50Q9ULJ7 1429 aa23.51■■□□□ 1.35
EPB41L3-204ENST00000540638 ANKRD30BQ9BXX2 1392 aa23.5■■□□□ 1.35
EPB41L3-204ENST00000540638 SALL2Q9Y467 1007 aaPredicted RBP23.49■■□□□ 1.35
EPB41L3-204ENST00000540638 NCOA1Q15788 1441 aa23.47■■□□□ 1.35
EPB41L3-204ENST00000540638 AKNAQ7Z591 1439 aa23.45■■□□□ 1.34
EPB41L3-204ENST00000540638 ATP10BO94823 1461 aa23.45■■□□□ 1.34
EPB41L3-204ENST00000540638 KIF15Q9NS87 1388 aa23.45■■□□□ 1.34
EPB41L3-204ENST00000540638 KIF14Q15058 1648 aa23.44■■□□□ 1.34
EPB41L3-204ENST00000540638 KIF7Q2M1P5 1343 aa23.44■■□□□ 1.34
EPB41L3-204ENST00000540638 ROCK1Q13464 1354 aa23.43■■□□□ 1.34
EPB41L3-204ENST00000540638 DENND4BO75064 1496 aaPredicted RBP23.41■■□□□ 1.34
EPB41L3-204ENST00000540638 C9orf84Q5VXU9 1444 aa23.41■■□□□ 1.34
EPB41L3-204ENST00000540638 SENP3Q9H4L4 574 aaPredicted RBP23.4■■□□□ 1.34
EPB41L3-204ENST00000540638 PRKRIP1Q9H875 184 aaPredicted RBP23.4■■□□□ 1.34
EPB41L3-204ENST00000540638 CCDC7Q96M83 1385 aa23.4■■□□□ 1.34
EPB41L3-204ENST00000540638 NUP160Q12769 1436 aa23.39■■□□□ 1.33
EPB41L3-204ENST00000540638 ST20-MTHFSA0A0A6YYL1 179 aa23.38■■□□□ 1.33
EPB41L3-204ENST00000540638 USP47Q96K76 1375 aa23.36■■□□□ 1.33
EPB41L3-204ENST00000540638 TMC1Q8TDI8 760 aa23.35■■□□□ 1.33
EPB41L3-204ENST00000540638 RPRD2Q5VT52 1461 aaKnown RBP23.33■■□□□ 1.33
EPB41L3-204ENST00000540638 KIAA1107Q9UPP5 1409 aa23.33■■□□□ 1.33
EPB41L3-204ENST00000540638 AFAP1Q8N556 730 aa23.31■■□□□ 1.32
EPB41L3-204ENST00000540638 DNMT1P26358 1616 aaKnown RBP23.3■■□□□ 1.32
EPB41L3-204ENST00000540638 CHGAP10645 457 aaKnown RBP23.3■■□□□ 1.32
EPB41L3-204ENST00000540638 EFCAB2Q5VUJ9 269 aa23.29■■□□□ 1.32
EPB41L3-204ENST00000540638 CNTLNQ9NXG0 1405 aa23.28■■□□□ 1.32
EPB41L3-204ENST00000540638 ROCK2O75116 1388 aaKnown RBP23.27■■□□□ 1.32
EPB41L3-204ENST00000540638 ARHGAP5Q13017 1502 aa23.27■■□□□ 1.32
EPB41L3-204ENST00000540638 GCC2Q8IWJ2 1684 aa23.27■■□□□ 1.32
EPB41L3-204ENST00000540638 PZPP20742 1482 aa23.26■■□□□ 1.31
EPB41L3-204ENST00000540638 NBPF1Q3BBV0 1214 aa23.26■■□□□ 1.31
EPB41L3-204ENST00000540638 TSHZ2Q9NRE2 1034 aa23.23■■□□□ 1.31
EPB41L3-204ENST00000540638 CC2D1BQ5T0F9 858 aaKnown RBP23.23■■□□□ 1.31
EPB41L3-204ENST00000540638 KDM5BQ9UGL1 1544 aa23.21■■□□□ 1.31
EPB41L3-204ENST00000540638 NPM1P06748 294 aaKnown RBP eCLIP23.2■■□□□ 1.3
EPB41L3-204ENST00000540638 CCDC144AA2RUR9 1427 aa23.2■■□□□ 1.3
EPB41L3-204ENST00000540638 SPAG9O60271 1321 aaKnown RBP23.19■■□□□ 1.3
EPB41L3-204ENST00000540638 RSPH4AQ5TD94 716 aa23.18■■□□□ 1.3
EPB41L3-204ENST00000540638 KIF3BO15066 747 aa23.17■■□□□ 1.3
EPB41L3-204ENST00000540638 TEX14Q8IWB6 1497 aa23.16■■□□□ 1.3
EPB41L3-204ENST00000540638 ITSN2Q9NZM3 1697 aa23.15■■□□□ 1.3
EPB41L3-204ENST00000540638 B4GALNT3Q6L9W6 998 aa23.14■■□□□ 1.3
EPB41L3-204ENST00000540638 ERCC6L2Q5T890 1561 aa23.14■■□□□ 1.29
EPB41L3-204ENST00000540638 CCDC141Q6ZP82 1450 aa23.13■■□□□ 1.29
EPB41L3-204ENST00000540638 ABCA8O94911 1581 aa23.12■■□□□ 1.29
EPB41L3-204ENST00000540638 ABCC10Q5T3U5 1492 aa23.11■■□□□ 1.29
EPB41L3-204ENST00000540638 PLEKHH2Q8IVE3 1493 aa23.1■■□□□ 1.29
EPB41L3-204ENST00000540638 SYCP2Q9BX26 1530 aa23.1■■□□□ 1.29
EPB41L3-204ENST00000540638 GGT6Q6P531 493 aa23.07■■□□□ 1.28
EPB41L3-204ENST00000540638 ADGRL2O95490 1459 aa23.03■■□□□ 1.28
EPB41L3-204ENST00000540638 CHD1O14646 1710 aa23.02■■□□□ 1.28
EPB41L3-204ENST00000540638 MBD5Q9P267 1494 aa23.02■■□□□ 1.28
EPB41L3-204ENST00000540638 CDC42BPAQ5VT25 1732 aa23.02■■□□□ 1.28
EPB41L3-204ENST00000540638 NUTM2DQ5VT03 806 aaPredicted RBP23.01■■□□□ 1.27
EPB41L3-204ENST00000540638 PANK3Q9H999 370 aa23■■□□□ 1.27
EPB41L3-204ENST00000540638 TMF1P82094 1093 aa22.98■■□□□ 1.27
EPB41L3-204ENST00000540638 SPATA31E1Q6ZUB1 1445 aa22.98■■□□□ 1.27
EPB41L3-204ENST00000540638 TRAPPC8Q9Y2L5 1435 aa22.97■■□□□ 1.27
EPB41L3-204ENST00000540638 ZBED9Q6R2W3 1325 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms