RNA–Protein interactions for RNA: ENST00000540139.5

CYB561A3-214, Transcript of cytochrome b561 family member A3, humanhuman

TSL 3

Gene CYB561A3, Length 1,202 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-214ENST00000540139 FOXD4L1Q9NU39 408 aa18.35■□□□□ 0.53
CYB561A3-214ENST00000540139 PLCH2O75038 1416 aa18.34■□□□□ 0.53
CYB561A3-214ENST00000540139 MAP3K4Q9Y6R4 1608 aa18.34■□□□□ 0.53
CYB561A3-214ENST00000540139 ARAP3Q8WWN8 1544 aa18.33■□□□□ 0.53
CYB561A3-214ENST00000540139 PHLDB1Q86UU1 1377 aa18.33■□□□□ 0.53
CYB561A3-214ENST00000540139 NCOA2Q15596 1464 aa18.33■□□□□ 0.52
CYB561A3-214ENST00000540139 SUPT6HQ7KZ85 1726 aaKnown RBP18.32■□□□□ 0.52
CYB561A3-214ENST00000540139 CCNB3Q8WWL7 1395 aa18.31■□□□□ 0.52
CYB561A3-214ENST00000540139 CNKSR2Q8WXI2 1034 aa18.31■□□□□ 0.52
CYB561A3-214ENST00000540139 TEX14Q8IWB6 1497 aa18.31■□□□□ 0.52
CYB561A3-214ENST00000540139 EFCAB2Q5VUJ9 269 aa18.3■□□□□ 0.52
CYB561A3-214ENST00000540139 GPATCH8Q9UKJ3 1502 aaKnown RBP18.29■□□□□ 0.52
CYB561A3-214ENST00000540139 TTC37Q6PGP7 1564 aa18.29■□□□□ 0.52
CYB561A3-214ENST00000540139 NEO1Q92859 1461 aa18.26■□□□□ 0.51
CYB561A3-214ENST00000540139 CFDP1Q9UEE9 299 aaPredicted RBP18.26■□□□□ 0.51
CYB561A3-214ENST00000540139 MIA2Q96PC5 1412 aa18.24■□□□□ 0.51
CYB561A3-214ENST00000540139 MYOM3Q5VTT5 1437 aa18.23■□□□□ 0.51
CYB561A3-214ENST00000540139 MYO5CQ9NQX4 1742 aa18.23■□□□□ 0.51
CYB561A3-214ENST00000540139 FANCAO15360 1455 aa18.23■□□□□ 0.51
CYB561A3-214ENST00000540139 PPRC1Q5VV67 1664 aaKnown RBP18.22■□□□□ 0.51
CYB561A3-214ENST00000540139 PREX2Q70Z35 1606 aa18.21■□□□□ 0.51
CYB561A3-214ENST00000540139 AKNAQ7Z591 1439 aa18.21■□□□□ 0.51
CYB561A3-214ENST00000540139 CDC42BPAQ5VT25 1732 aa18.2■□□□□ 0.5
CYB561A3-214ENST00000540139 ARHGAP5Q13017 1502 aa18.2■□□□□ 0.5
CYB561A3-214ENST00000540139 KIAA1107Q9UPP5 1409 aa18.2■□□□□ 0.5
CYB561A3-214ENST00000540139 CFAP74Q9C0B2 1584 aa18.2■□□□□ 0.5
CYB561A3-214ENST00000540139 PLEKHH2Q8IVE3 1493 aa18.2■□□□□ 0.5
CYB561A3-214ENST00000540139 ITSN2Q9NZM3 1697 aa18.19■□□□□ 0.5
CYB561A3-214ENST00000540139 TSPOAP1O95153 1857 aa18.18■□□□□ 0.5
CYB561A3-214ENST00000540139 CDC42BPBQ9Y5S2 1711 aa18.18■□□□□ 0.5
CYB561A3-214ENST00000540139 RSPH4AQ5TD94 716 aa18.18■□□□□ 0.5
CYB561A3-214ENST00000540139 PPARGC1BQ86YN6 1023 aaKnown RBP18.16■□□□□ 0.5
CYB561A3-214ENST00000540139 FGD6Q6ZV73 1430 aa18.15■□□□□ 0.5
CYB561A3-214ENST00000540139 ZNF777Q9ULD5 760 aaPredicted RBP18.14■□□□□ 0.49
CYB561A3-214ENST00000540139 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.14■□□□□ 0.49
CYB561A3-214ENST00000540139 ADGRL1O94910 1474 aa18.14■□□□□ 0.49
CYB561A3-214ENST00000540139 SCAPERQ9BY12 1400 aa18.13■□□□□ 0.49
CYB561A3-214ENST00000540139 DENND4BO75064 1496 aaPredicted RBP18.12■□□□□ 0.49
CYB561A3-214ENST00000540139 TCOF1Q13428 1488 aaKnown RBP18.12■□□□□ 0.49
CYB561A3-214ENST00000540139 ZNF644Q9H582 1327 aaPredicted RBP18.11■□□□□ 0.49
CYB561A3-214ENST00000540139 SAMD9LQ8IVG5 1584 aa18.09■□□□□ 0.49
CYB561A3-214ENST00000540139 ABCC1P33527 1531 aa18.09■□□□□ 0.49
CYB561A3-214ENST00000540139 COL17A1Q9UMD9 1497 aaPredicted RBP18.09■□□□□ 0.49
CYB561A3-214ENST00000540139 RRBP1Q9P2E9 1410 aaKnown RBP18.09■□□□□ 0.49
CYB561A3-214ENST00000540139 CAMSAP2Q08AD1 1489 aa18.08■□□□□ 0.49
CYB561A3-214ENST00000540139 MBD5Q9P267 1494 aa18.08■□□□□ 0.49
CYB561A3-214ENST00000540139 POGZQ7Z3K3 1410 aa18.07■□□□□ 0.48
CYB561A3-214ENST00000540139 HNRNPMP52272 730 aaKnown RBP eCLIP18.07■□□□□ 0.48
CYB561A3-214ENST00000540139 ARHGEF12Q9NZN5 1544 aa18.07■□□□□ 0.48
CYB561A3-214ENST00000540139 ZNF518AQ6AHZ1 1483 aa18.07■□□□□ 0.48
CYB561A3-214ENST00000540139 PTPN23Q9H3S7 1636 aa18.06■□□□□ 0.48
CYB561A3-214ENST00000540139 RAPGEF3O95398 923 aa18.05■□□□□ 0.48
CYB561A3-214ENST00000540139 AFAP1Q8N556 730 aa18.04■□□□□ 0.48
CYB561A3-214ENST00000540139 KDM6BO15054 1643 aa18.04■□□□□ 0.48
CYB561A3-214ENST00000540139 TRAPPC8Q9Y2L5 1435 aa18.04■□□□□ 0.48
CYB561A3-214ENST00000540139 ARHGEF5Q12774 1597 aa18.04■□□□□ 0.48
CYB561A3-214ENST00000540139 MAGI2Q86UL8 1455 aa18.03■□□□□ 0.48
CYB561A3-214ENST00000540139 TSPY4P0CV99 314 aa18.03■□□□□ 0.48
CYB561A3-214ENST00000540139 TSPY10P0CW01 314 aa18.03■□□□□ 0.48
CYB561A3-214ENST00000540139 SYCP2Q9BX26 1530 aa18.03■□□□□ 0.48
CYB561A3-214ENST00000540139 FAM50AQ14320 339 aaKnown RBP18.02■□□□□ 0.48
CYB561A3-214ENST00000540139 CCDC141Q6ZP82 1450 aa18.01■□□□□ 0.47
CYB561A3-214ENST00000540139 MLH3Q9UHC1 1453 aa18.01■□□□□ 0.47
CYB561A3-214ENST00000540139 RTEL1-TNFRSF6BF6WH68 1400 aa18.01■□□□□ 0.47
CYB561A3-214ENST00000540139 KDM5CP41229 1560 aa18■□□□□ 0.47
CYB561A3-214ENST00000540139 ZMYM4Q5VZL5 1548 aa18■□□□□ 0.47
CYB561A3-214ENST00000540139 RICTORQ6R327 1708 aa18■□□□□ 0.47
CYB561A3-214ENST00000540139 SPAG9O60271 1321 aaKnown RBP17.99■□□□□ 0.47
CYB561A3-214ENST00000540139 ABCC5O15440 1437 aa17.99■□□□□ 0.47
CYB561A3-214ENST00000540139 SCAF1Q9H7N4 1312 aaKnown RBP17.98■□□□□ 0.47
CYB561A3-214ENST00000540139 FRMPD1Q5SYB0 1578 aa17.97■□□□□ 0.47
CYB561A3-214ENST00000540139 DAPK1P53355 1430 aa17.97■□□□□ 0.47
CYB561A3-214ENST00000540139 SHANK2Q9UPX8 1470 aa17.96■□□□□ 0.47
CYB561A3-214ENST00000540139 DNMT1P26358 1616 aaKnown RBP17.94■□□□□ 0.46
CYB561A3-214ENST00000540139 MAST1Q9Y2H9 1570 aa17.93■□□□□ 0.46
CYB561A3-214ENST00000540139 C9orf84Q5VXU9 1444 aa17.93■□□□□ 0.46
CYB561A3-214ENST00000540139 HECW2Q9P2P5 1572 aa17.91■□□□□ 0.46
CYB561A3-214ENST00000540139 ROCK1Q13464 1354 aa17.91■□□□□ 0.46
CYB561A3-214ENST00000540139 ZFYVE16Q7Z3T8 1539 aa17.9■□□□□ 0.46
CYB561A3-214ENST00000540139 MYT1LQ9UL68 1186 aa17.9■□□□□ 0.46
CYB561A3-214ENST00000540139 ANKRD30AQ9BXX3 1397 aa17.9■□□□□ 0.46
CYB561A3-214ENST00000540139 ATP10AO60312 1499 aa17.89■□□□□ 0.45
CYB561A3-214ENST00000540139 ADGRL2O95490 1459 aa17.89■□□□□ 0.45
CYB561A3-214ENST00000540139 ATP7AQ04656 1500 aa17.89■□□□□ 0.45
CYB561A3-214ENST00000540139 NCOA1Q15788 1441 aa17.89■□□□□ 0.45
CYB561A3-214ENST00000540139 INO80Q9ULG1 1556 aaPredicted RBP17.88■□□□□ 0.45
CYB561A3-214ENST00000540139 FKBP8Q14318 412 aa17.88■□□□□ 0.45
CYB561A3-214ENST00000540139 KIDINS220Q9ULH0 1771 aa17.88■□□□□ 0.45
CYB561A3-214ENST00000540139 PTPRKQ15262 1439 aa17.88■□□□□ 0.45
CYB561A3-214ENST00000540139 YEATS2Q9ULM3 1422 aa17.88■□□□□ 0.45
CYB561A3-214ENST00000540139 ARHGEF40Q8TER5 1519 aa17.86■□□□□ 0.45
CYB561A3-214ENST00000540139 CROCC2H7BZ55 1655 aa17.85■□□□□ 0.45
CYB561A3-214ENST00000540139 DHX29Q7Z478 1369 aaKnown RBP17.85■□□□□ 0.45
CYB561A3-214ENST00000540139 REREQ9P2R6 1566 aa17.85■□□□□ 0.45
CYB561A3-214ENST00000540139 TRIM26Q12899 539 aaPredicted RBP17.84■□□□□ 0.45
CYB561A3-214ENST00000540139 CHIC2Q9UKJ5 165 aa17.84■□□□□ 0.45
CYB561A3-214ENST00000540139 PLXNC1O60486 1568 aa17.83■□□□□ 0.45
CYB561A3-214ENST00000540139 ITGAEP38570 1179 aa17.83■□□□□ 0.44
CYB561A3-214ENST00000540139 DIP2CQ9Y2E4 1556 aa17.83■□□□□ 0.44
CYB561A3-214ENST00000540139 A2MP01023 1474 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms