RNA–Protein interactions for RNA: ENST00000539813.1

LINC00273-201, long intergenic non-protein coding RNA 273, humanhuman

BASIC

Gene LINC00273, Length 1,452 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00273-201ENST00000539813 ITSN2Q9NZM3 1697 aa40.43■■■■■ 4.06
LINC00273-201ENST00000539813 PHLDB1Q86UU1 1377 aa40.41■■■■■ 4.06
LINC00273-201ENST00000539813 CCNB3Q8WWL7 1395 aa40.41■■■■■ 4.06
LINC00273-201ENST00000539813 ARHGAP5Q13017 1502 aa40.41■■■■■ 4.06
LINC00273-201ENST00000539813 KDM6BO15054 1643 aa40.39■■■■■ 4.06
LINC00273-201ENST00000539813 EFCAB2Q5VUJ9 269 aa40.34■■■■■ 4.05
LINC00273-201ENST00000539813 AKNAQ7Z591 1439 aa40.33■■■■■ 4.05
LINC00273-201ENST00000539813 COL17A1Q9UMD9 1497 aaPredicted RBP40.28■■■■■ 4.04
LINC00273-201ENST00000539813 CFDP1Q9UEE9 299 aaPredicted RBP40.24■■■■■ 4.03
LINC00273-201ENST00000539813 ADGRL1O94910 1474 aa40.24■■■■■ 4.03
LINC00273-201ENST00000539813 SAMD9LQ8IVG5 1584 aa40.24■■■■■ 4.03
LINC00273-201ENST00000539813 MYOM3Q5VTT5 1437 aa40.22■■■■■ 4.03
LINC00273-201ENST00000539813 ABCC1P33527 1531 aa40.2■■■■■ 4.03
LINC00273-201ENST00000539813 RICTORQ6R327 1708 aa40.17■■■■■ 4.02
LINC00273-201ENST00000539813 SCAPERQ9BY12 1400 aa40.16■■■■■ 4.02
LINC00273-201ENST00000539813 DENND4BO75064 1496 aaPredicted RBP40.15■■■■■ 4.02
LINC00273-201ENST00000539813 FRMPD1Q5SYB0 1578 aa40.15■■■■■ 4.02
LINC00273-201ENST00000539813 MIA2Q96PC5 1412 aa40.14■■■■■ 4.02
LINC00273-201ENST00000539813 PLEKHH2Q8IVE3 1493 aa40.12■■■■■ 4.01
LINC00273-201ENST00000539813 ZNF777Q9ULD5 760 aaPredicted RBP40.12■■■■■ 4.01
LINC00273-201ENST00000539813 PPARGC1BQ86YN6 1023 aaKnown RBP40.09■■■■■ 4.01
LINC00273-201ENST00000539813 ARHGEF12Q9NZN5 1544 aa40.09■■■■■ 4.01
LINC00273-201ENST00000539813 POGZQ7Z3K3 1410 aa40.09■■■■■ 4.01
LINC00273-201ENST00000539813 KIAA1107Q9UPP5 1409 aa40.09■■■■■ 4.01
LINC00273-201ENST00000539813 SYCP2Q9BX26 1530 aa40.08■■■■■ 4.01
LINC00273-201ENST00000539813 CAMSAP2Q08AD1 1489 aa40.07■■■■■ 4.01
LINC00273-201ENST00000539813 RAPGEF3O95398 923 aa40.06■■■■■ 4
LINC00273-201ENST00000539813 ZNF644Q9H582 1327 aaPredicted RBP40.03■■■■■ 4
LINC00273-201ENST00000539813 FGD6Q6ZV73 1430 aa40.03■■■■■ 4
LINC00273-201ENST00000539813 ZNF518AQ6AHZ1 1483 aa40.03■■■■■ 4
LINC00273-201ENST00000539813 ZMYM4Q5VZL5 1548 aa40.02■■■■■ 4
LINC00273-201ENST00000539813 PTPN23Q9H3S7 1636 aa40.02■■■■■ 4
LINC00273-201ENST00000539813 KDM5CP41229 1560 aa40■■■■□ 3.99
LINC00273-201ENST00000539813 TRAPPC8Q9Y2L5 1435 aa39.98■■■■□ 3.99
LINC00273-201ENST00000539813 MBD5Q9P267 1494 aa39.97■■■■□ 3.99
LINC00273-201ENST00000539813 TCOF1Q13428 1488 aaKnown RBP39.95■■■■□ 3.99
LINC00273-201ENST00000539813 HNRNPMP52272 730 aaKnown RBP eCLIP39.94■■■■□ 3.98
LINC00273-201ENST00000539813 ARHGEF5Q12774 1597 aa39.93■■■■□ 3.98
LINC00273-201ENST00000539813 AFAP1Q8N556 730 aa39.9■■■■□ 3.98
LINC00273-201ENST00000539813 MAGI2Q86UL8 1455 aa39.89■■■■□ 3.98
LINC00273-201ENST00000539813 HECW2Q9P2P5 1572 aa39.88■■■■□ 3.97
LINC00273-201ENST00000539813 CCDC141Q6ZP82 1450 aa39.86■■■■□ 3.97
LINC00273-201ENST00000539813 ARHGEF40Q8TER5 1519 aa39.84■■■■□ 3.97
LINC00273-201ENST00000539813 MLH3Q9UHC1 1453 aa39.83■■■■□ 3.97
LINC00273-201ENST00000539813 RSPH4AQ5TD94 716 aa39.83■■■■□ 3.97
LINC00273-201ENST00000539813 ZFYVE16Q7Z3T8 1539 aa39.82■■■■□ 3.97
LINC00273-201ENST00000539813 KIDINS220Q9ULH0 1771 aa39.8■■■■□ 3.96
LINC00273-201ENST00000539813 INO80Q9ULG1 1556 aaPredicted RBP39.79■■■■□ 3.96
LINC00273-201ENST00000539813 DNMT1P26358 1616 aaKnown RBP39.78■■■■□ 3.96
LINC00273-201ENST00000539813 CROCC2H7BZ55 1655 aa39.76■■■■□ 3.96
LINC00273-201ENST00000539813 RRBP1Q9P2E9 1410 aaKnown RBP39.75■■■■□ 3.95
LINC00273-201ENST00000539813 YEATS2Q9ULM3 1422 aa39.75■■■■□ 3.95
LINC00273-201ENST00000539813 SPAG9O60271 1321 aaKnown RBP39.74■■■■□ 3.95
LINC00273-201ENST00000539813 ATP7AQ04656 1500 aa39.74■■■■□ 3.95
LINC00273-201ENST00000539813 ABCA6Q8N139 1617 aa39.72■■■■□ 3.95
LINC00273-201ENST00000539813 MAST1Q9Y2H9 1570 aa39.71■■■■□ 3.95
LINC00273-201ENST00000539813 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP39.71■■■■□ 3.95
LINC00273-201ENST00000539813 FAM50AQ14320 339 aaKnown RBP39.7■■■■□ 3.95
LINC00273-201ENST00000539813 RTEL1-TNFRSF6BF6WH68 1400 aa39.7■■■■□ 3.95
LINC00273-201ENST00000539813 DIP2CQ9Y2E4 1556 aa39.7■■■■□ 3.95
LINC00273-201ENST00000539813 DAPK1P53355 1430 aa39.69■■■■□ 3.94
LINC00273-201ENST00000539813 ABCC5O15440 1437 aa39.68■■■■□ 3.94
LINC00273-201ENST00000539813 SHANK2Q9UPX8 1470 aa39.67■■■■□ 3.94
LINC00273-201ENST00000539813 MYT1LQ9UL68 1186 aa39.66■■■■□ 3.94
LINC00273-201ENST00000539813 TSPY4P0CV99 314 aa39.64■■■■□ 3.94
LINC00273-201ENST00000539813 TSPY10P0CW01 314 aa39.64■■■■□ 3.94
LINC00273-201ENST00000539813 ATP10AO60312 1499 aa39.63■■■■□ 3.93
LINC00273-201ENST00000539813 C9orf84Q5VXU9 1444 aa39.61■■■■□ 3.93
LINC00273-201ENST00000539813 REREQ9P2R6 1566 aa39.61■■■■□ 3.93
LINC00273-201ENST00000539813 ADGBQ8N7X0 1667 aa39.6■■■■□ 3.93
LINC00273-201ENST00000539813 SIGLEC1Q9BZZ2 1709 aa39.56■■■■□ 3.92
LINC00273-201ENST00000539813 PLXNC1O60486 1568 aa39.56■■■■□ 3.92
LINC00273-201ENST00000539813 ADGRL2O95490 1459 aa39.47■■■■□ 3.91
LINC00273-201ENST00000539813 A2MP01023 1474 aa39.47■■■■□ 3.91
LINC00273-201ENST00000539813 PTPRKQ15262 1439 aa39.46■■■■□ 3.91
LINC00273-201ENST00000539813 AGLP35573 1532 aa39.44■■■■□ 3.9
LINC00273-201ENST00000539813 ANKRD30AQ9BXX3 1397 aa39.4■■■■□ 3.9
LINC00273-201ENST00000539813 CHIC2Q9UKJ5 165 aa39.39■■■■□ 3.9
LINC00273-201ENST00000539813 NCOA1Q15788 1441 aa39.39■■■■□ 3.9
LINC00273-201ENST00000539813 DHX29Q7Z478 1369 aaKnown RBP39.39■■■■□ 3.9
LINC00273-201ENST00000539813 BCORL1Q5H9F3 1711 aa39.38■■■■□ 3.9
LINC00273-201ENST00000539813 DUOX2Q9NRD8 1548 aa39.37■■■■□ 3.89
LINC00273-201ENST00000539813 ARID4BQ4LE39 1312 aaPredicted RBP39.36■■■■□ 3.89
LINC00273-201ENST00000539813 KIF15Q9NS87 1388 aa39.36■■■■□ 3.89
LINC00273-201ENST00000539813 ITGAEP38570 1179 aa39.35■■■■□ 3.89
LINC00273-201ENST00000539813 ROCK1Q13464 1354 aa39.35■■■■□ 3.89
LINC00273-201ENST00000539813 EIF2AK4Q9P2K8 1649 aaKnown RBP39.3■■■■□ 3.88
LINC00273-201ENST00000539813 RRP7BPQ9NSQ0 103 aa39.3■■■■□ 3.88
LINC00273-201ENST00000539813 ADAMTSL3P82987 1691 aa39.27■■■■□ 3.88
LINC00273-201ENST00000539813 ERBINQ96RT1 1412 aa39.26■■■■□ 3.88
LINC00273-201ENST00000539813 RNF17Q9BXT8 1623 aaKnown RBP39.19■■■■□ 3.86
LINC00273-201ENST00000539813 FER1L4A9Z1Z3 1794 aa39.18■■■■□ 3.86
LINC00273-201ENST00000539813 MADDQ8WXG6 1647 aa39.17■■■■□ 3.86
LINC00273-201ENST00000539813 KDM4FA0A1W2PPD8 638 aa39.16■■■■□ 3.86
LINC00273-201ENST00000539813 MLECQ14165 292 aa39.16■■■■□ 3.86
LINC00273-201ENST00000539813 GCC2Q8IWJ2 1684 aa39.15■■■■□ 3.86
LINC00273-201ENST00000539813 KIF3BO15066 747 aa39.15■■■■□ 3.86
LINC00273-201ENST00000539813 ANKRD50Q9ULJ7 1429 aa39.14■■■■□ 3.86
LINC00273-201ENST00000539813 DEPDC5O75140 1603 aa39.11■■■■□ 3.85
LINC00273-201ENST00000539813 MROH1Q8NDA8 1641 aa39.08■■■■□ 3.85
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms