RNA–Protein interactions for RNA: ENST00000539743.5

CPT1A-205, Transcript of carnitine palmitoyltransferase 1A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CPT1A, Length 2,382 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-205ENST00000539743 AKNAQ7Z591 1439 aa16.75■□□□□ 0.27
CPT1A-205ENST00000539743 SNAPC4Q5SXM2 1469 aa16.75■□□□□ 0.27
CPT1A-205ENST00000539743 MRC2Q9UBG0 1479 aa16.75■□□□□ 0.27
CPT1A-205ENST00000539743 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.75■□□□□ 0.27
CPT1A-205ENST00000539743 FAM50AQ14320 339 aaKnown RBP16.74■□□□□ 0.27
CPT1A-205ENST00000539743 ATP1B4Q9UN42 357 aaPredicted RBP16.74■□□□□ 0.27
CPT1A-205ENST00000539743 FAM43AQ8N2R8 423 aa16.73■□□□□ 0.27
CPT1A-205ENST00000539743 NUDCQ9Y266 331 aa16.73■□□□□ 0.27
CPT1A-205ENST00000539743 KDM5BQ9UGL1 1544 aa16.72■□□□□ 0.27
CPT1A-205ENST00000539743 NPM2Q86SE8 214 aaKnown RBP16.72■□□□□ 0.27
CPT1A-205ENST00000539743 MS4A1P11836 297 aa16.7■□□□□ 0.26
CPT1A-205ENST00000539743 DDRGK1Q96HY6 314 aa16.7■□□□□ 0.26
CPT1A-205ENST00000539743 UACAQ9BZF9 1416 aa16.69■□□□□ 0.26
CPT1A-205ENST00000539743 HSPA5P11021 654 aaKnown RBP16.69■□□□□ 0.26
CPT1A-205ENST00000539743 PBRM1Q86U86 1689 aa16.69■□□□□ 0.26
CPT1A-205ENST00000539743 PDE4AP27815 886 aa16.69■□□□□ 0.26
CPT1A-205ENST00000539743 THOC2Q8NI27 1593 aaKnown RBP16.68■□□□□ 0.26
CPT1A-205ENST00000539743 BACH2Q9BYV9 841 aa16.67■□□□□ 0.26
CPT1A-205ENST00000539743 GRIN2BQ13224 1484 aa16.66■□□□□ 0.26
CPT1A-205ENST00000539743 EIF4G2P78344 907 aaKnown RBP eCLIP16.66■□□□□ 0.26
CPT1A-205ENST00000539743 ADAMTS12P58397 1594 aa16.66■□□□□ 0.26
CPT1A-205ENST00000539743 CCDC18Q5T9S5 1454 aa16.65■□□□□ 0.26
CPT1A-205ENST00000539743 FRAT1Q92837 279 aaPredicted RBP16.65■□□□□ 0.26
CPT1A-205ENST00000539743 NFKBIBQ15653 356 aa16.64■□□□□ 0.25
CPT1A-205ENST00000539743 NCOA1Q15788 1441 aa16.64■□□□□ 0.25
CPT1A-205ENST00000539743 IFT140Q96RY7 1462 aa16.63■□□□□ 0.25
CPT1A-205ENST00000539743 WDR62O43379 1518 aa16.63■□□□□ 0.25
CPT1A-205ENST00000539743 MTUS2Q5JR59 1369 aa16.63■□□□□ 0.25
CPT1A-205ENST00000539743 CCDC7Q96M83 1385 aa16.62■□□□□ 0.25
CPT1A-205ENST00000539743 FGD6Q6ZV73 1430 aa16.61■□□□□ 0.25
CPT1A-205ENST00000539743 POLR1AO95602 1720 aaPredicted RBP16.61■□□□□ 0.25
CPT1A-205ENST00000539743 IQGAP2Q13576 1575 aa16.61■□□□□ 0.25
CPT1A-205ENST00000539743 LRRIQ1Q96JM4 1722 aa16.6■□□□□ 0.25
CPT1A-205ENST00000539743 HFM1A2PYH4 1435 aa16.6■□□□□ 0.25
CPT1A-205ENST00000539743 EHBP1L1Q8N3D4 1523 aa16.58■□□□□ 0.24
CPT1A-205ENST00000539743 PTPN23Q9H3S7 1636 aa16.58■□□□□ 0.24
CPT1A-205ENST00000539743 DAXXQ9UER7 740 aaPredicted RBP16.57■□□□□ 0.24
CPT1A-205ENST00000539743 ZNF608Q9ULD9 1512 aaPredicted RBP16.56■□□□□ 0.24
CPT1A-205ENST00000539743 ZMYND15Q9H091 742 aa16.54■□□□□ 0.24
CPT1A-205ENST00000539743 SUPT6HQ7KZ85 1726 aaKnown RBP16.54■□□□□ 0.24
CPT1A-205ENST00000539743 MYOM3Q5VTT5 1437 aa16.54■□□□□ 0.24
CPT1A-205ENST00000539743 HECW1Q76N89 1606 aa16.54■□□□□ 0.24
CPT1A-205ENST00000539743 UGGT2Q9NYU1 1516 aa16.54■□□□□ 0.24
CPT1A-205ENST00000539743 ARHGEF11O15085 1522 aa16.52■□□□□ 0.24
CPT1A-205ENST00000539743 PLPPR3Q6T4P5 718 aa16.51■□□□□ 0.23
CPT1A-205ENST00000539743 RRP1P56182 461 aaKnown RBP16.5■□□□□ 0.23
CPT1A-205ENST00000539743 VSIG10Q8N0Z9 540 aa16.5■□□□□ 0.23
CPT1A-205ENST00000539743 MAGI3Q5TCQ9 1506 aa16.5■□□□□ 0.23
CPT1A-205ENST00000539743 DCAF11Q8TEB1 546 aa16.49■□□□□ 0.23
CPT1A-205ENST00000539743 KIAA0586Q9BVV6 1533 aa16.49■□□□□ 0.23
CPT1A-205ENST00000539743 EPRSP07814 1512 aaKnown RBP16.48■□□□□ 0.23
CPT1A-205ENST00000539743 NAIPQ13075 1403 aa16.48■□□□□ 0.23
CPT1A-205ENST00000539743 EIF4G3O43432 1585 aaKnown RBP16.48■□□□□ 0.23
CPT1A-205ENST00000539743 EXOC6Q8TAG9 804 aa16.48■□□□□ 0.23
CPT1A-205ENST00000539743 ERCC6Q03468 1493 aa16.47■□□□□ 0.23
CPT1A-205ENST00000539743 PTPRKQ15262 1439 aa16.47■□□□□ 0.23
CPT1A-205ENST00000539743 RRP9O43818 475 aaKnown RBP16.46■□□□□ 0.23
CPT1A-205ENST00000539743 GRIN2AQ12879 1464 aa16.46■□□□□ 0.22
CPT1A-205ENST00000539743 KIF7Q2M1P5 1343 aa16.45■□□□□ 0.22
CPT1A-205ENST00000539743 TCOF1Q13428 1488 aaKnown RBP16.44■□□□□ 0.22
CPT1A-205ENST00000539743 DISP1Q96F81 1524 aa16.43■□□□□ 0.22
CPT1A-205ENST00000539743 KIAA0556O60303 1618 aa16.43■□□□□ 0.22
CPT1A-205ENST00000539743 MAGI1Q96QZ7 1491 aaPredicted RBP16.42■□□□□ 0.22
CPT1A-205ENST00000539743 HSP90AA2PQ14568 343 aaPredicted RBP16.42■□□□□ 0.22
CPT1A-205ENST00000539743 CDK13Q14004 1512 aaKnown RBP16.42■□□□□ 0.22
CPT1A-205ENST00000539743 SPATA31E1Q6ZUB1 1445 aa16.42■□□□□ 0.22
CPT1A-205ENST00000539743 DHX29Q7Z478 1369 aaKnown RBP16.41■□□□□ 0.22
CPT1A-205ENST00000539743 FRAT2O75474 233 aaPredicted RBP16.41■□□□□ 0.22
CPT1A-205ENST00000539743 RRAGDQ9NQL2 400 aaPredicted RBP16.41■□□□□ 0.22
CPT1A-205ENST00000539743 PNISRQ8TF01 805 aaKnown RBP16.4■□□□□ 0.22
CPT1A-205ENST00000539743 RCAN3Q9UKA8 241 aa16.4■□□□□ 0.22
CPT1A-205ENST00000539743 L1TD1Q5T7N2 865 aaKnown RBP16.4■□□□□ 0.22
CPT1A-205ENST00000539743 MIA2Q96PC5 1412 aa16.39■□□□□ 0.21
CPT1A-205ENST00000539743 PODXL2Q9NZ53 605 aa16.38■□□□□ 0.21
CPT1A-205ENST00000539743 HSP90AA1P07900 732 aaKnown RBP16.37■□□□□ 0.21
CPT1A-205ENST00000539743 SLC4A3P48751 1232 aa16.37■□□□□ 0.21
CPT1A-205ENST00000539743 SYNJ2O15056 1496 aa16.37■□□□□ 0.21
CPT1A-205ENST00000539743 L3MBTL2Q969R5 705 aa16.36■□□□□ 0.21
CPT1A-205ENST00000539743 LRPPRCP42704 1394 aaKnown RBP16.36■□□□□ 0.21
CPT1A-205ENST00000539743 GCC2Q8IWJ2 1684 aa16.36■□□□□ 0.21
CPT1A-205ENST00000539743 DENND4BO75064 1496 aaPredicted RBP16.36■□□□□ 0.21
CPT1A-205ENST00000539743 NUP153P49790 1475 aaKnown RBP16.34■□□□□ 0.21
CPT1A-205ENST00000539743 RAPGEF6Q8TEU7 1601 aa16.34■□□□□ 0.21
CPT1A-205ENST00000539743 PDE3BQ13370 1112 aa16.34■□□□□ 0.21
CPT1A-205ENST00000539743 TMC1Q8TDI8 760 aa16.34■□□□□ 0.21
CPT1A-205ENST00000539743 CEP170Q5SW79 1584 aa16.33■□□□□ 0.21
CPT1A-205ENST00000539743 NAP1L5Q96NT1 182 aaPredicted RBP16.33■□□□□ 0.2
CPT1A-205ENST00000539743 PNNQ9H307 717 aaKnown RBP16.33■□□□□ 0.2
CPT1A-205ENST00000539743 CHMP7Q8WUX9 453 aaPredicted RBP16.33■□□□□ 0.2
CPT1A-205ENST00000539743 CLCN1P35523 988 aa16.31■□□□□ 0.2
CPT1A-205ENST00000539743 ARID4BQ4LE39 1312 aaPredicted RBP16.31■□□□□ 0.2
CPT1A-205ENST00000539743 ARID3CA6NKF2 412 aa16.3■□□□□ 0.2
CPT1A-205ENST00000539743 FAM161AQ3B820 660 aa16.3■□□□□ 0.2
CPT1A-205ENST00000539743 NUP160Q12769 1436 aa16.3■□□□□ 0.2
CPT1A-205ENST00000539743 BRD4O60885 1362 aaPredicted RBP16.28■□□□□ 0.2
CPT1A-205ENST00000539743 RPRD2Q5VT52 1461 aaKnown RBP16.28■□□□□ 0.2
CPT1A-205ENST00000539743 TEX14Q8IWB6 1497 aa16.28■□□□□ 0.2
CPT1A-205ENST00000539743 KTN1Q86UP2 1357 aaKnown RBP16.28■□□□□ 0.2
CPT1A-205ENST00000539743 NBPF8Q3BBV2 869 aa16.28■□□□□ 0.2
CPT1A-205ENST00000539743 RRP7BPQ9NSQ0 103 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms