RNA–Protein interactions for RNA: ENST00000539429.1

GTF2H3-207, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 2

Gene GTF2H3, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-207ENST00000539429 P3H3Q8IVL6 736 aa15.49■□□□□ 0.07
GTF2H3-207ENST00000539429 MNX1P50219 401 aaPredicted RBP15.46■□□□□ 0.07
GTF2H3-207ENST00000539429 UACAQ9BZF9 1416 aa15.44■□□□□ 0.06
GTF2H3-207ENST00000539429 ABCC2Q92887 1545 aa15.43■□□□□ 0.06
GTF2H3-207ENST00000539429 KIF13AQ9H1H9 1805 aa15.42■□□□□ 0.06
GTF2H3-207ENST00000539429 SAMD9Q5K651 1589 aa15.41■□□□□ 0.06
GTF2H3-207ENST00000539429 MAPKBP1O60336 1514 aa15.4■□□□□ 0.06
GTF2H3-207ENST00000539429 NUBP1P53384 320 aa15.4■□□□□ 0.06
GTF2H3-207ENST00000539429 UHRF1BP1LA0JNW5 1464 aa15.4■□□□□ 0.06
GTF2H3-207ENST00000539429 CHRDL2Q6WN34 429 aa15.39■□□□□ 0.05
GTF2H3-207ENST00000539429 CIZ1Q9ULV3 898 aaPredicted RBP15.39■□□□□ 0.05
GTF2H3-207ENST00000539429 CHADLQ6NUI6 762 aa15.38■□□□□ 0.05
GTF2H3-207ENST00000539429 ZCCHC11Q5TAX3 1644 aaKnown RBP15.38■□□□□ 0.05
GTF2H3-207ENST00000539429 PLB1Q6P1J6 1458 aa15.38■□□□□ 0.05
GTF2H3-207ENST00000539429 FXR2P51116 673 aaKnown RBP eCLIP15.37■□□□□ 0.05
GTF2H3-207ENST00000539429 FAM69CQ0P6D2 419 aa15.37■□□□□ 0.05
GTF2H3-207ENST00000539429 TSPOAP1O95153 1857 aa15.36■□□□□ 0.05
GTF2H3-207ENST00000539429 ECM2O94769 699 aaPredicted RBP15.36■□□□□ 0.05
GTF2H3-207ENST00000539429 EFCAB5A4FU69 1503 aa15.36■□□□□ 0.05
GTF2H3-207ENST00000539429 FHOD3Q2V2M9 1422 aa15.34■□□□□ 0.05
GTF2H3-207ENST00000539429 ABCA8O94911 1581 aa15.34■□□□□ 0.05
GTF2H3-207ENST00000539429 DIP2BQ9P265 1576 aa15.33■□□□□ 0.05
GTF2H3-207ENST00000539429 ARID3CA6NKF2 412 aa15.33■□□□□ 0.04
GTF2H3-207ENST00000539429 GSE1Q14687 1217 aa15.33■□□□□ 0.04
GTF2H3-207ENST00000539429 ASXL2Q76L83 1435 aa15.33■□□□□ 0.04
GTF2H3-207ENST00000539429 ABCC10Q5T3U5 1492 aa15.33■□□□□ 0.04
GTF2H3-207ENST00000539429 KDM5BQ9UGL1 1544 aa15.33■□□□□ 0.04
GTF2H3-207ENST00000539429 RAPGEF6Q8TEU7 1601 aa15.32■□□□□ 0.04
GTF2H3-207ENST00000539429 PRKAR2AP13861 404 aaKnown RBP15.32■□□□□ 0.04
GTF2H3-207ENST00000539429 ATP1B4Q9UN42 357 aaPredicted RBP15.3■□□□□ 0.04
GTF2H3-207ENST00000539429 FARP1Q9Y4F1 1045 aaPredicted RBP15.29■□□□□ 0.04
GTF2H3-207ENST00000539429 DCAF8Q5TAQ9 597 aa15.28■□□□□ 0.04
GTF2H3-207ENST00000539429 PIP4P2Q8N4L2 257 aa15.27■□□□□ 0.04
GTF2H3-207ENST00000539429 FAM212AQ96EL1 285 aa15.27■□□□□ 0.04
GTF2H3-207ENST00000539429 KCNH8Q96L42 1107 aa15.27■□□□□ 0.04
GTF2H3-207ENST00000539429 RASEFQ8IZ41 740 aa15.25■□□□□ 0.03
GTF2H3-207ENST00000539429 WDR7Q9Y4E6 1490 aa15.25■□□□□ 0.03
GTF2H3-207ENST00000539429 ARHGAP35Q9NRY4 1499 aa15.24■□□□□ 0.03
GTF2H3-207ENST00000539429 FMN1Q68DA7 1419 aa15.23■□□□□ 0.03
GTF2H3-207ENST00000539429 ATP10BO94823 1461 aa15.22■□□□□ 0.03
GTF2H3-207ENST00000539429 GLI2P10070 1586 aa15.22■□□□□ 0.03
GTF2H3-207ENST00000539429 EPRSP07814 1512 aaKnown RBP15.22■□□□□ 0.03
GTF2H3-207ENST00000539429 NUP153P49790 1475 aaKnown RBP15.2■□□□□ 0.02
GTF2H3-207ENST00000539429 CLIP1P30622 1438 aa15.19■□□□□ 0.02
GTF2H3-207ENST00000539429 HECW1Q76N89 1606 aa15.19■□□□□ 0.02
GTF2H3-207ENST00000539429 RGL2O15211 777 aa15.19■□□□□ 0.02
GTF2H3-207ENST00000539429 CFAP43Q8NDM7 1665 aa15.19■□□□□ 0.02
GTF2H3-207ENST00000539429 MAP3K4Q9Y6R4 1608 aa15.18■□□□□ 0.02
GTF2H3-207ENST00000539429 PLEKHD1A6NEE1 506 aa15.17■□□□□ 0.02
GTF2H3-207ENST00000539429 KDM6BO15054 1643 aa15.17■□□□□ 0.02
GTF2H3-207ENST00000539429 TEX14Q8IWB6 1497 aa15.14■□□□□ 0.01
GTF2H3-207ENST00000539429 PPRC1Q5VV67 1664 aaKnown RBP15.14■□□□□ 0.01
GTF2H3-207ENST00000539429 LOC105371045A0A1W2PR82 267 aa15.14■□□□□ 0.01
GTF2H3-207ENST00000539429 CDK13Q14004 1512 aaKnown RBP15.13■□□□□ 0.01
GTF2H3-207ENST00000539429 CD109Q6YHK3 1445 aa15.13■□□□□ 0.01
GTF2H3-207ENST00000539429 CDK11AQ9UQ88 783 aaPredicted RBP15.12■□□□□ 0.01
GTF2H3-207ENST00000539429 PCF11O94913 1555 aaKnown RBP15.11■□□□□ 0.01
GTF2H3-207ENST00000539429 CEP162Q5TB80 1403 aa15.09■□□□□ 0.01
GTF2H3-207ENST00000539429 LRRIQ1Q96JM4 1722 aa15.09■□□□□ 0.01
GTF2H3-207ENST00000539429 TSPYL2Q9H2G4 693 aaPredicted RBP15.09■□□□□ 0.01
GTF2H3-207ENST00000539429 ABCA9Q8IUA7 1624 aa15.09■□□□□ 0.01
GTF2H3-207ENST00000539429 CHRM1P11229 460 aaPredicted RBP15.08■□□□□ 0
GTF2H3-207ENST00000539429 CASKIN1Q8WXD9 1431 aa15.07■□□□□ 0
GTF2H3-207ENST00000539429 CCDC18Q5T9S5 1454 aa15.06■□□□□ 0
GTF2H3-207ENST00000539429 FYCO1Q9BQS8 1478 aa15.05■□□□□ -0
GTF2H3-207ENST00000539429 MAGI3Q5TCQ9 1506 aa15.05■□□□□ -0
GTF2H3-207ENST00000539429 RNF25Q96BH1 459 aaPredicted RBP15.04■□□□□ -0
GTF2H3-207ENST00000539429 PYGBP11216 843 aa15.03■□□□□ -0
GTF2H3-207ENST00000539429 KIF14Q15058 1648 aa15.03■□□□□ -0
GTF2H3-207ENST00000539429 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.02□□□□□ -0.01
GTF2H3-207ENST00000539429 MYO5CQ9NQX4 1742 aa15.01□□□□□ -0.01
GTF2H3-207ENST00000539429 TTC37Q6PGP7 1564 aa15.01□□□□□ -0.01
GTF2H3-207ENST00000539429 CFAP74Q9C0B2 1584 aa15□□□□□ -0.01
GTF2H3-207ENST00000539429 RIOK3O14730 519 aaKnown RBP15□□□□□ -0.01
GTF2H3-207ENST00000539429 SLC24A1O60721 1099 aa15□□□□□ -0.01
GTF2H3-207ENST00000539429 PAK3O75914 559 aaPredicted RBP15□□□□□ -0.01
GTF2H3-207ENST00000539429 TROQ12816 1431 aaPredicted RBP14.99□□□□□ -0.01
GTF2H3-207ENST00000539429 TAOK2Q9UL54 1235 aa14.97□□□□□ -0.01
GTF2H3-207ENST00000539429 CCDC61Q9Y6R9 512 aa14.97□□□□□ -0.01
GTF2H3-207ENST00000539429 NEO1Q92859 1461 aa14.96□□□□□ -0.01
GTF2H3-207ENST00000539429 PHLDB1Q86UU1 1377 aa14.96□□□□□ -0.02
GTF2H3-207ENST00000539429 FANCAO15360 1455 aa14.95□□□□□ -0.02
GTF2H3-207ENST00000539429 COL17A1Q9UMD9 1497 aaPredicted RBP14.95□□□□□ -0.02
GTF2H3-207ENST00000539429 CHGAP10645 457 aaKnown RBP14.94□□□□□ -0.02
GTF2H3-207ENST00000539429 BBXQ8WY36 941 aaPredicted RBP14.93□□□□□ -0.02
GTF2H3-207ENST00000539429 MTUS2Q5JR59 1369 aa14.93□□□□□ -0.02
GTF2H3-207ENST00000539429 ARHGAP5Q13017 1502 aa14.92□□□□□ -0.02
GTF2H3-207ENST00000539429 ARAP3Q8WWN8 1544 aa14.92□□□□□ -0.02
GTF2H3-207ENST00000539429 AKNAQ7Z591 1439 aa14.92□□□□□ -0.02
GTF2H3-207ENST00000539429 VPS8Q8N3P4 1428 aa14.92□□□□□ -0.02
GTF2H3-207ENST00000539429 CD44P16070 742 aaKnown RBP14.91□□□□□ -0.02
GTF2H3-207ENST00000539429 EFCAB2Q5VUJ9 269 aa14.91□□□□□ -0.02
GTF2H3-207ENST00000539429 PLCH2O75038 1416 aa14.91□□□□□ -0.02
GTF2H3-207ENST00000539429 CDC42BPBQ9Y5S2 1711 aa14.9□□□□□ -0.02
GTF2H3-207ENST00000539429 VGFO15240 615 aaPredicted RBP14.9□□□□□ -0.02
GTF2H3-207ENST00000539429 RAPGEF3O95398 923 aa14.9□□□□□ -0.02
GTF2H3-207ENST00000539429 CDC42BPAQ5VT25 1732 aa14.89□□□□□ -0.03
GTF2H3-207ENST00000539429 PLCB2Q00722 1185 aa14.89□□□□□ -0.03
GTF2H3-207ENST00000539429 HS6ST3Q8IZP7 471 aa14.88□□□□□ -0.03
GTF2H3-207ENST00000539429 DENND4BO75064 1496 aaPredicted RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms