RNA–Protein interactions for RNA: ENST00000539387.5

NDUFC1-210, Transcript of NADH:ubiquinone oxidoreductase subunit C1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NDUFC1, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFC1-210ENST00000539387 COL17A1Q9UMD9 1497 aaPredicted RBP23.34■■□□□ 1.33
NDUFC1-210ENST00000539387 PHLDB1Q86UU1 1377 aa23.33■■□□□ 1.33
NDUFC1-210ENST00000539387 CCNB3Q8WWL7 1395 aa23.33■■□□□ 1.33
NDUFC1-210ENST00000539387 AKNAQ7Z591 1439 aa23.32■■□□□ 1.32
NDUFC1-210ENST00000539387 CFAP74Q9C0B2 1584 aa23.31■■□□□ 1.32
NDUFC1-210ENST00000539387 SUPT6HQ7KZ85 1726 aaKnown RBP23.3■■□□□ 1.32
NDUFC1-210ENST00000539387 ARAP3Q8WWN8 1544 aa23.3■■□□□ 1.32
NDUFC1-210ENST00000539387 NCOA2Q15596 1464 aa23.3■■□□□ 1.32
NDUFC1-210ENST00000539387 GPATCH8Q9UKJ3 1502 aaKnown RBP23.29■■□□□ 1.32
NDUFC1-210ENST00000539387 ADRA2BP18089 450 aa23.29■■□□□ 1.32
NDUFC1-210ENST00000539387 PREX2Q70Z35 1606 aa23.29■■□□□ 1.32
NDUFC1-210ENST00000539387 CDC42BPAQ5VT25 1732 aa23.28■■□□□ 1.32
NDUFC1-210ENST00000539387 PPP6R1Q9UPN7 881 aa23.28■■□□□ 1.32
NDUFC1-210ENST00000539387 CDC42BPBQ9Y5S2 1711 aa23.28■■□□□ 1.32
NDUFC1-210ENST00000539387 CFDP1Q9UEE9 299 aaPredicted RBP23.27■■□□□ 1.32
NDUFC1-210ENST00000539387 ZNF777Q9ULD5 760 aaPredicted RBP23.27■■□□□ 1.32
NDUFC1-210ENST00000539387 RAPGEF3O95398 923 aa23.26■■□□□ 1.31
NDUFC1-210ENST00000539387 ADGRL1O94910 1474 aa23.25■■□□□ 1.31
NDUFC1-210ENST00000539387 SCAPERQ9BY12 1400 aa23.23■■□□□ 1.31
NDUFC1-210ENST00000539387 DENND4BO75064 1496 aaPredicted RBP23.23■■□□□ 1.31
NDUFC1-210ENST00000539387 ITSN2Q9NZM3 1697 aa23.19■■□□□ 1.3
NDUFC1-210ENST00000539387 PPARGC1BQ86YN6 1023 aaKnown RBP23.19■■□□□ 1.3
NDUFC1-210ENST00000539387 SAMD9LQ8IVG5 1584 aa23.16■■□□□ 1.3
NDUFC1-210ENST00000539387 FRMPD1Q5SYB0 1578 aa23.15■■□□□ 1.3
NDUFC1-210ENST00000539387 ZNF644Q9H582 1327 aaPredicted RBP23.15■■□□□ 1.3
NDUFC1-210ENST00000539387 ABCC1P33527 1531 aa23.15■■□□□ 1.3
NDUFC1-210ENST00000539387 POGZQ7Z3K3 1410 aa23.15■■□□□ 1.3
NDUFC1-210ENST00000539387 HNRNPMP52272 730 aaKnown RBP eCLIP23.13■■□□□ 1.29
NDUFC1-210ENST00000539387 RICTORQ6R327 1708 aa23.13■■□□□ 1.29
NDUFC1-210ENST00000539387 ARHGEF12Q9NZN5 1544 aa23.13■■□□□ 1.29
NDUFC1-210ENST00000539387 MYOM3Q5VTT5 1437 aa23.12■■□□□ 1.29
NDUFC1-210ENST00000539387 AFAP1Q8N556 730 aa23.12■■□□□ 1.29
NDUFC1-210ENST00000539387 SYCP2Q9BX26 1530 aa23.11■■□□□ 1.29
NDUFC1-210ENST00000539387 PLEKHH2Q8IVE3 1493 aa23.11■■□□□ 1.29
NDUFC1-210ENST00000539387 TRAPPC8Q9Y2L5 1435 aa23.1■■□□□ 1.29
NDUFC1-210ENST00000539387 ZNF518AQ6AHZ1 1483 aa23.1■■□□□ 1.29
NDUFC1-210ENST00000539387 MYT1LQ9UL68 1186 aa23.09■■□□□ 1.29
NDUFC1-210ENST00000539387 KIAA1107Q9UPP5 1409 aa23.08■■□□□ 1.29
NDUFC1-210ENST00000539387 CAMSAP2Q08AD1 1489 aa23.07■■□□□ 1.28
NDUFC1-210ENST00000539387 MIA2Q96PC5 1412 aa23.06■■□□□ 1.28
NDUFC1-210ENST00000539387 ZMYM4Q5VZL5 1548 aa23.05■■□□□ 1.28
NDUFC1-210ENST00000539387 KDM5CP41229 1560 aa23.02■■□□□ 1.28
NDUFC1-210ENST00000539387 ZFYVE16Q7Z3T8 1539 aa23.02■■□□□ 1.28
NDUFC1-210ENST00000539387 FGD6Q6ZV73 1430 aa23.01■■□□□ 1.27
NDUFC1-210ENST00000539387 YEATS2Q9ULM3 1422 aa23.01■■□□□ 1.27
NDUFC1-210ENST00000539387 MAGI2Q86UL8 1455 aa23.01■■□□□ 1.27
NDUFC1-210ENST00000539387 MBD5Q9P267 1494 aa23■■□□□ 1.27
NDUFC1-210ENST00000539387 SPAG9O60271 1321 aaKnown RBP23■■□□□ 1.27
NDUFC1-210ENST00000539387 ARHGEF40Q8TER5 1519 aa22.99■■□□□ 1.27
NDUFC1-210ENST00000539387 PTPN23Q9H3S7 1636 aa22.98■■□□□ 1.27
NDUFC1-210ENST00000539387 HECW2Q9P2P5 1572 aa22.97■■□□□ 1.27
NDUFC1-210ENST00000539387 MLH3Q9UHC1 1453 aa22.97■■□□□ 1.27
NDUFC1-210ENST00000539387 CCDC141Q6ZP82 1450 aa22.96■■□□□ 1.27
NDUFC1-210ENST00000539387 FAM50AQ14320 339 aaKnown RBP22.95■■□□□ 1.26
NDUFC1-210ENST00000539387 RSPH4AQ5TD94 716 aa22.95■■□□□ 1.26
NDUFC1-210ENST00000539387 ARID4BQ4LE39 1312 aaPredicted RBP22.93■■□□□ 1.26
NDUFC1-210ENST00000539387 ARHGEF5Q12774 1597 aa22.93■■□□□ 1.26
NDUFC1-210ENST00000539387 TCOF1Q13428 1488 aaKnown RBP22.92■■□□□ 1.26
NDUFC1-210ENST00000539387 TSPY4P0CV99 314 aa22.92■■□□□ 1.26
NDUFC1-210ENST00000539387 TSPY10P0CW01 314 aa22.92■■□□□ 1.26
NDUFC1-210ENST00000539387 ATP10AO60312 1499 aa22.92■■□□□ 1.26
NDUFC1-210ENST00000539387 KIDINS220Q9ULH0 1771 aa22.91■■□□□ 1.26
NDUFC1-210ENST00000539387 ATP7AQ04656 1500 aa22.9■■□□□ 1.26
NDUFC1-210ENST00000539387 ABCA6Q8N139 1617 aa22.9■■□□□ 1.26
NDUFC1-210ENST00000539387 DIP2CQ9Y2E4 1556 aa22.89■■□□□ 1.26
NDUFC1-210ENST00000539387 C9orf84Q5VXU9 1444 aa22.89■■□□□ 1.25
NDUFC1-210ENST00000539387 INO80Q9ULG1 1556 aaPredicted RBP22.89■■□□□ 1.25
NDUFC1-210ENST00000539387 RTEL1-TNFRSF6BF6WH68 1400 aa22.85■■□□□ 1.25
NDUFC1-210ENST00000539387 ABCC5O15440 1437 aa22.85■■□□□ 1.25
NDUFC1-210ENST00000539387 DAPK1P53355 1430 aa22.83■■□□□ 1.25
NDUFC1-210ENST00000539387 DNMT1P26358 1616 aaKnown RBP22.82■■□□□ 1.24
NDUFC1-210ENST00000539387 KDM4FA0A1W2PPD8 638 aa22.81■■□□□ 1.24
NDUFC1-210ENST00000539387 MLECQ14165 292 aa22.81■■□□□ 1.24
NDUFC1-210ENST00000539387 PIAS4Q8N2W9 510 aaPredicted RBP22.81■■□□□ 1.24
NDUFC1-210ENST00000539387 SIGLEC1Q9BZZ2 1709 aa22.81■■□□□ 1.24
NDUFC1-210ENST00000539387 CHIC2Q9UKJ5 165 aa22.8■■□□□ 1.24
NDUFC1-210ENST00000539387 A2MP01023 1474 aa22.79■■□□□ 1.24
NDUFC1-210ENST00000539387 MAST1Q9Y2H9 1570 aa22.79■■□□□ 1.24
NDUFC1-210ENST00000539387 ITGAEP38570 1179 aa22.78■■□□□ 1.24
NDUFC1-210ENST00000539387 REREQ9P2R6 1566 aa22.78■■□□□ 1.24
NDUFC1-210ENST00000539387 SHANK2Q9UPX8 1470 aa22.78■■□□□ 1.24
NDUFC1-210ENST00000539387 CROCC2H7BZ55 1655 aa22.77■■□□□ 1.24
NDUFC1-210ENST00000539387 RRBP1Q9P2E9 1410 aaKnown RBP22.76■■□□□ 1.23
NDUFC1-210ENST00000539387 ADGBQ8N7X0 1667 aa22.75■■□□□ 1.23
NDUFC1-210ENST00000539387 BCORL1Q5H9F3 1711 aa22.74■■□□□ 1.23
NDUFC1-210ENST00000539387 RRP7BPQ9NSQ0 103 aa22.74■■□□□ 1.23
NDUFC1-210ENST00000539387 DHX29Q7Z478 1369 aaKnown RBP22.74■■□□□ 1.23
NDUFC1-210ENST00000539387 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.74■■□□□ 1.239e-11■■■□□ 15.4
NDUFC1-210ENST00000539387 AGLP35573 1532 aa22.72■■□□□ 1.23
NDUFC1-210ENST00000539387 PLXNC1O60486 1568 aa22.72■■□□□ 1.23
NDUFC1-210ENST00000539387 ANKRD30AQ9BXX3 1397 aa22.71■■□□□ 1.23
NDUFC1-210ENST00000539387 KIF15Q9NS87 1388 aa22.7■■□□□ 1.22
NDUFC1-210ENST00000539387 PTPRKQ15262 1439 aa22.7■■□□□ 1.22
NDUFC1-210ENST00000539387 ADAMTSL3P82987 1691 aa22.68■■□□□ 1.22
NDUFC1-210ENST00000539387 KIF3BO15066 747 aa22.68■■□□□ 1.22
NDUFC1-210ENST00000539387 GGT6Q6P531 493 aa22.67■■□□□ 1.22
NDUFC1-210ENST00000539387 NCOA1Q15788 1441 aa22.66■■□□□ 1.22
NDUFC1-210ENST00000539387 MADDQ8WXG6 1647 aa22.66■■□□□ 1.22
NDUFC1-210ENST00000539387 DUOX2Q9NRD8 1548 aa22.66■■□□□ 1.22
NDUFC1-210ENST00000539387 ADGRL2O95490 1459 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms