RNA–Protein interactions for RNA: ENST00000539029.5

PTPN6-212, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 3

Gene PTPN6, Length 705 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-212ENST00000539029 ZMYM4Q5VZL5 1548 aa17.14■□□□□ 0.33
PTPN6-212ENST00000539029 CARMIL1Q5VZK9 1371 aa17.13■□□□□ 0.33
PTPN6-212ENST00000539029 SRCAPQ6ZRS2 3230 aa17.11■□□□□ 0.33
PTPN6-212ENST00000539029 MAGI2Q86UL8 1455 aa17.1■□□□□ 0.33
PTPN6-212ENST00000539029 KIF27Q86VH2 1401 aa17.09■□□□□ 0.33
PTPN6-212ENST00000539029 CAMSAP1Q5T5Y3 1602 aa17.07■□□□□ 0.32
PTPN6-212ENST00000539029 POTEAQ6S8J7 498 aa17.06■□□□□ 0.32
PTPN6-212ENST00000539029 SETD1AO15047 1707 aaKnown RBP17.05■□□□□ 0.32
PTPN6-212ENST00000539029 C3P01024 1663 aa17.04■□□□□ 0.32
PTPN6-212ENST00000539029 NCKAP5LQ9HCH0 1330 aa17.03■□□□□ 0.32
PTPN6-212ENST00000539029 TRAPPC8Q9Y2L5 1435 aa17.03■□□□□ 0.32
PTPN6-212ENST00000539029 ATP10AO60312 1499 aa17■□□□□ 0.31
PTPN6-212ENST00000539029 HECW1Q76N89 1606 aa17■□□□□ 0.31
PTPN6-212ENST00000539029 C9orf84Q5VXU9 1444 aa17■□□□□ 0.31
PTPN6-212ENST00000539029 ATP10BO94823 1461 aa16.99■□□□□ 0.31
PTPN6-212ENST00000539029 CFAP74Q9C0B2 1584 aa16.98■□□□□ 0.31
PTPN6-212ENST00000539029 ARID3CA6NKF2 412 aa16.98■□□□□ 0.31
PTPN6-212ENST00000539029 PTPRKQ15262 1439 aa16.97■□□□□ 0.31
PTPN6-212ENST00000539029 PKD2Q13563 968 aa16.97■□□□□ 0.31
PTPN6-212ENST00000539029 UPF1Q92900 1129 aaKnown RBP eCLIP16.97■□□□□ 0.31
PTPN6-212ENST00000539029 CPS1P31327 1500 aa16.96■□□□□ 0.3
PTPN6-212ENST00000539029 SENP3Q9H4L4 574 aaPredicted RBP16.95■□□□□ 0.3
PTPN6-212ENST00000539029 ALKQ9UM73 1620 aa16.95■□□□□ 0.3
PTPN6-212ENST00000539029 PPP6R1Q9UPN7 881 aa16.93■□□□□ 0.3
PTPN6-212ENST00000539029 GOLGA3Q08378 1498 aa16.92■□□□□ 0.3
PTPN6-212ENST00000539029 PLA2R1Q13018 1463 aa16.92■□□□□ 0.3
PTPN6-212ENST00000539029 TCOF1Q13428 1488 aaKnown RBP16.9■□□□□ 0.3
PTPN6-212ENST00000539029 RAPGEF2Q9Y4G8 1499 aa16.87■□□□□ 0.29
PTPN6-212ENST00000539029 ESF1Q9H501 851 aaKnown RBP16.87■□□□□ 0.29
PTPN6-212ENST00000539029 SUPT6HQ7KZ85 1726 aaKnown RBP16.86■□□□□ 0.29
PTPN6-212ENST00000539029 SHANK2Q9UPX8 1470 aa16.84■□□□□ 0.29
PTPN6-212ENST00000539029 NPATQ14207 1427 aa16.83■□□□□ 0.28
PTPN6-212ENST00000539029 FAM9AQ8IZU1 332 aaPredicted RBP16.82■□□□□ 0.28
PTPN6-212ENST00000539029 SCAPERQ9BY12 1400 aa16.81■□□□□ 0.28
PTPN6-212ENST00000539029 ZNF142P52746 1687 aaPredicted RBP16.81■□□□□ 0.28
PTPN6-212ENST00000539029 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.78■□□□□ 0.28
PTPN6-212ENST00000539029 HNRNPUL2Q1KMD3 747 aaKnown RBP16.78■□□□□ 0.28
PTPN6-212ENST00000539029 CNTLNQ9NXG0 1405 aa16.78■□□□□ 0.28
PTPN6-212ENST00000539029 AGLP35573 1532 aa16.77■□□□□ 0.28
PTPN6-212ENST00000539029 CTTNBP2Q8WZ74 1663 aa16.76■□□□□ 0.27
PTPN6-212ENST00000539029 REREQ9P2R6 1566 aa16.75■□□□□ 0.27
PTPN6-212ENST00000539029 CEP170BQ9Y4F5 1589 aaPredicted RBP16.74■□□□□ 0.27
PTPN6-212ENST00000539029 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.74■□□□□ 0.27
PTPN6-212ENST00000539029 MYO3AQ8NEV4 1616 aa16.74■□□□□ 0.27
PTPN6-212ENST00000539029 RNF17Q9BXT8 1623 aaKnown RBP16.71■□□□□ 0.27
PTPN6-212ENST00000539029 MROH2AA6NES4 1674 aa16.71■□□□□ 0.27
PTPN6-212ENST00000539029 DIP2CQ9Y2E4 1556 aa16.7■□□□□ 0.26
PTPN6-212ENST00000539029 VWDEQ8N2E2 1590 aa16.69■□□□□ 0.26
PTPN6-212ENST00000539029 IFFO2Q5TF58 517 aa16.69■□□□□ 0.26
PTPN6-212ENST00000539029 POLR1AO95602 1720 aaPredicted RBP16.68■□□□□ 0.26
PTPN6-212ENST00000539029 RAPGEF6Q8TEU7 1601 aa16.67■□□□□ 0.26
PTPN6-212ENST00000539029 PLEKHD1A6NEE1 506 aa16.67■□□□□ 0.26
PTPN6-212ENST00000539029 ZMYM3Q14202 1370 aa16.66■□□□□ 0.26
PTPN6-212ENST00000539029 TRIM52Q96A61 297 aa16.66■□□□□ 0.26
PTPN6-212ENST00000539029 NEURL4Q96JN8 1562 aa16.65■□□□□ 0.26
PTPN6-212ENST00000539029 ZNF518AQ6AHZ1 1483 aa16.65■□□□□ 0.26
PTPN6-212ENST00000539029 LRRC7Q96NW7 1537 aa16.65■□□□□ 0.26
PTPN6-212ENST00000539029 KDM5CP41229 1560 aa16.64■□□□□ 0.25
PTPN6-212ENST00000539029 MYT1LQ9UL68 1186 aa16.63■□□□□ 0.25
PTPN6-212ENST00000539029 ABCA6Q8N139 1617 aa16.62■□□□□ 0.25
PTPN6-212ENST00000539029 PLCH2O75038 1416 aa16.62■□□□□ 0.25
PTPN6-212ENST00000539029 NUP153P49790 1475 aaKnown RBP16.61■□□□□ 0.25
PTPN6-212ENST00000539029 P3H3Q8IVL6 736 aa16.6■□□□□ 0.25
PTPN6-212ENST00000539029 DNMT1P26358 1616 aaKnown RBP16.59■□□□□ 0.25
PTPN6-212ENST00000539029 AFAP1Q8N556 730 aa16.59■□□□□ 0.25
PTPN6-212ENST00000539029 ZRANB1Q9UGI0 708 aa16.58■□□□□ 0.24
PTPN6-212ENST00000539029 SYNMO15061 1565 aa16.58■□□□□ 0.24
PTPN6-212ENST00000539029 A2ML1A8K2U0 1454 aa16.57■□□□□ 0.24
PTPN6-212ENST00000539029 FOXD1Q16676 465 aa16.57■□□□□ 0.24
PTPN6-212ENST00000539029 STRCP1A6NGW2 1772 aa16.56■□□□□ 0.24
PTPN6-212ENST00000539029 FAM135BQ49AJ0 1406 aa16.56■□□□□ 0.24
PTPN6-212ENST00000539029 EFCAB2Q5VUJ9 269 aa16.56■□□□□ 0.24
PTPN6-212ENST00000539029 RBM33Q96EV2 1170 aaKnown RBP16.55■□□□□ 0.24
PTPN6-212ENST00000539029 SETBP1Q9Y6X0 1596 aa16.55■□□□□ 0.24
PTPN6-212ENST00000539029 ZNF772Q68DY9 489 aaPredicted RBP16.54■□□□□ 0.24
PTPN6-212ENST00000539029 MLH3Q9UHC1 1453 aa16.54■□□□□ 0.24
PTPN6-212ENST00000539029 CHIC1Q5VXU3 224 aa16.52■□□□□ 0.24
PTPN6-212ENST00000539029 CDK12Q9NYV4 1490 aaPredicted RBP16.52■□□□□ 0.23
PTPN6-212ENST00000539029 CLTCQ00610 1675 aaKnown RBP16.51■□□□□ 0.23
PTPN6-212ENST00000539029 RXRBP28702 533 aa16.51■□□□□ 0.23
PTPN6-212ENST00000539029 ANKLE2Q86XL3 938 aa16.5■□□□□ 0.23
PTPN6-212ENST00000539029 NPHP4O75161 1426 aaPredicted RBP16.49■□□□□ 0.23
PTPN6-212ENST00000539029 MED14O60244 1454 aa16.48■□□□□ 0.23
PTPN6-212ENST00000539029 MYO5CQ9NQX4 1742 aa16.48■□□□□ 0.23
PTPN6-212ENST00000539029 CDK13Q14004 1512 aaKnown RBP16.47■□□□□ 0.23
PTPN6-212ENST00000539029 DEPDC5O75140 1603 aa16.45■□□□□ 0.22
PTPN6-212ENST00000539029 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.45■□□□□ 0.22
PTPN6-212ENST00000539029 IQGAP1P46940 1657 aa16.44■□□□□ 0.22
PTPN6-212ENST00000539029 JCADQ9P266 1359 aa16.44■□□□□ 0.22
PTPN6-212ENST00000539029 ROBO1Q9Y6N7 1651 aa16.43■□□□□ 0.22
PTPN6-212ENST00000539029 XIRP1Q702N8 1843 aaKnown RBP16.42■□□□□ 0.22
PTPN6-212ENST00000539029 SAMD9Q5K651 1589 aa16.42■□□□□ 0.22
PTPN6-212ENST00000539029 KIDINS220Q9ULH0 1771 aa16.41■□□□□ 0.22
PTPN6-212ENST00000539029 MEX3CQ5U5Q3 659 aaKnown RBP16.41■□□□□ 0.22
PTPN6-212ENST00000539029 ABCC1P33527 1531 aa16.4■□□□□ 0.22
PTPN6-212ENST00000539029 ITSN2Q9NZM3 1697 aa16.39■□□□□ 0.21
PTPN6-212ENST00000539029 LRP6O75581 1613 aa16.38■□□□□ 0.21
PTPN6-212ENST00000539029 EEA1Q15075 1411 aa16.38■□□□□ 0.21
PTPN6-212ENST00000539029 ARHGAP5Q13017 1502 aa16.37■□□□□ 0.21
PTPN6-212ENST00000539029 THEMISQ8N1K5 641 aaPredicted RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms