RNA–Protein interactions for RNA: ENST00000538375.5

COPS7A-207, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 898 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-207ENST00000538375 CFAP74Q9C0B2 1584 aa20.69■□□□□ 0.9
COPS7A-207ENST00000538375 KANK4Q5T7N3 995 aaPredicted RBP20.68■□□□□ 0.9
COPS7A-207ENST00000538375 SCAPERQ9BY12 1400 aa20.68■□□□□ 0.9
COPS7A-207ENST00000538375 TIAM1Q13009 1591 aa20.68■□□□□ 0.9
COPS7A-207ENST00000538375 CFDP1Q9UEE9 299 aaPredicted RBP20.67■□□□□ 0.9
COPS7A-207ENST00000538375 DENND4BO75064 1496 aaPredicted RBP20.67■□□□□ 0.9
COPS7A-207ENST00000538375 EHBP1L1Q8N3D4 1523 aa20.67■□□□□ 0.9
COPS7A-207ENST00000538375 ILDR1Q86SU0 546 aaPredicted RBP20.66■□□□□ 0.9
COPS7A-207ENST00000538375 MYT1LQ9UL68 1186 aa20.65■□□□□ 0.9
COPS7A-207ENST00000538375 GPATCH8Q9UKJ3 1502 aaKnown RBP20.63■□□□□ 0.89
COPS7A-207ENST00000538375 HECW2Q9P2P5 1572 aa20.63■□□□□ 0.89
COPS7A-207ENST00000538375 LRRC9Q6ZRR7 1453 aa20.62■□□□□ 0.89
COPS7A-207ENST00000538375 CDC42BPBQ9Y5S2 1711 aa20.61■□□□□ 0.89
COPS7A-207ENST00000538375 MAP3K1Q13233 1512 aa20.61■□□□□ 0.89
COPS7A-207ENST00000538375 PREX2Q70Z35 1606 aa20.6■□□□□ 0.89
COPS7A-207ENST00000538375 AFAP1Q8N556 730 aa20.6■□□□□ 0.89
COPS7A-207ENST00000538375 CDC42BPAQ5VT25 1732 aa20.6■□□□□ 0.89
COPS7A-207ENST00000538375 NCOA2Q15596 1464 aa20.59■□□□□ 0.89
COPS7A-207ENST00000538375 HNRNPMP52272 730 aaKnown RBP eCLIP20.58■□□□□ 0.89
COPS7A-207ENST00000538375 SUPT6HQ7KZ85 1726 aaKnown RBP20.58■□□□□ 0.88
COPS7A-207ENST00000538375 FRMPD1Q5SYB0 1578 aa20.55■□□□□ 0.88
COPS7A-207ENST00000538375 ZNF644Q9H582 1327 aaPredicted RBP20.54■□□□□ 0.88
COPS7A-207ENST00000538375 POGZQ7Z3K3 1410 aa20.54■□□□□ 0.88
COPS7A-207ENST00000538375 ARID4BQ4LE39 1312 aaPredicted RBP20.53■□□□□ 0.88
COPS7A-207ENST00000538375 RICTORQ6R327 1708 aa20.53■□□□□ 0.88
COPS7A-207ENST00000538375 TRAPPC8Q9Y2L5 1435 aa20.51■□□□□ 0.87
COPS7A-207ENST00000538375 ZNF518AQ6AHZ1 1483 aa20.5■□□□□ 0.87
COPS7A-207ENST00000538375 ARHGEF12Q9NZN5 1544 aa20.5■□□□□ 0.87
COPS7A-207ENST00000538375 PPARGC1BQ86YN6 1023 aaKnown RBP20.5■□□□□ 0.87
COPS7A-207ENST00000538375 ITSN2Q9NZM3 1697 aa20.5■□□□□ 0.87
COPS7A-207ENST00000538375 SAMD9LQ8IVG5 1584 aa20.5■□□□□ 0.87
COPS7A-207ENST00000538375 ABCC1P33527 1531 aa20.49■□□□□ 0.87
COPS7A-207ENST00000538375 YEATS2Q9ULM3 1422 aa20.48■□□□□ 0.87
COPS7A-207ENST00000538375 PLEKHH2Q8IVE3 1493 aa20.48■□□□□ 0.87
COPS7A-207ENST00000538375 MAGI2Q86UL8 1455 aa20.47■□□□□ 0.87
COPS7A-207ENST00000538375 ZFYVE16Q7Z3T8 1539 aa20.47■□□□□ 0.87
COPS7A-207ENST00000538375 ZMYM4Q5VZL5 1548 aa20.46■□□□□ 0.87
COPS7A-207ENST00000538375 SYCP2Q9BX26 1530 aa20.46■□□□□ 0.87
COPS7A-207ENST00000538375 SPAG9O60271 1321 aaKnown RBP20.46■□□□□ 0.87
COPS7A-207ENST00000538375 KIAA1107Q9UPP5 1409 aa20.45■□□□□ 0.86
COPS7A-207ENST00000538375 ADAMTSL3P82987 1691 aa20.45■□□□□ 0.86
COPS7A-207ENST00000538375 PTPRMP28827 1452 aa20.45■□□□□ 0.86
COPS7A-207ENST00000538375 MYOM3Q5VTT5 1437 aa20.43■□□□□ 0.86
COPS7A-207ENST00000538375 MLECQ14165 292 aa20.41■□□□□ 0.86
COPS7A-207ENST00000538375 ARHGEF40Q8TER5 1519 aa20.41■□□□□ 0.86
COPS7A-207ENST00000538375 ATP10AO60312 1499 aa20.4■□□□□ 0.86
COPS7A-207ENST00000538375 KDM5CP41229 1560 aa20.4■□□□□ 0.86
COPS7A-207ENST00000538375 CAMSAP2Q08AD1 1489 aa20.4■□□□□ 0.86
COPS7A-207ENST00000538375 RSPH4AQ5TD94 716 aa20.4■□□□□ 0.86
COPS7A-207ENST00000538375 MLH3Q9UHC1 1453 aa20.39■□□□□ 0.85
COPS7A-207ENST00000538375 MIA2Q96PC5 1412 aa20.38■□□□□ 0.85
COPS7A-207ENST00000538375 TSPY4P0CV99 314 aa20.38■□□□□ 0.85
COPS7A-207ENST00000538375 TSPY10P0CW01 314 aa20.38■□□□□ 0.85
COPS7A-207ENST00000538375 MBD5Q9P267 1494 aa20.37■□□□□ 0.85
COPS7A-207ENST00000538375 BCORL1Q5H9F3 1711 aa20.36■□□□□ 0.85
COPS7A-207ENST00000538375 C9orf84Q5VXU9 1444 aa20.36■□□□□ 0.85
COPS7A-207ENST00000538375 FAM50AQ14320 339 aaKnown RBP20.34■□□□□ 0.85
COPS7A-207ENST00000538375 CCDC141Q6ZP82 1450 aa20.32■□□□□ 0.84
COPS7A-207ENST00000538375 KIDINS220Q9ULH0 1771 aa20.31■□□□□ 0.84
COPS7A-207ENST00000538375 MADDQ8WXG6 1647 aa20.31■□□□□ 0.84
COPS7A-207ENST00000538375 DIP2CQ9Y2E4 1556 aa20.31■□□□□ 0.84
COPS7A-207ENST00000538375 FGD6Q6ZV73 1430 aa20.31■□□□□ 0.84
COPS7A-207ENST00000538375 ATP7AQ04656 1500 aa20.31■□□□□ 0.84
COPS7A-207ENST00000538375 PLPPR3Q6T4P5 718 aa20.3■□□□□ 0.84
COPS7A-207ENST00000538375 ABCA6Q8N139 1617 aa20.3■□□□□ 0.84
COPS7A-207ENST00000538375 LMTK3Q96Q04 1460 aa20.29■□□□□ 0.84
COPS7A-207ENST00000538375 PTPN23Q9H3S7 1636 aa20.28■□□□□ 0.84
COPS7A-207ENST00000538375 RTEL1-TNFRSF6BF6WH68 1400 aa20.27■□□□□ 0.83
COPS7A-207ENST00000538375 ARHGEF5Q12774 1597 aa20.26■□□□□ 0.83
COPS7A-207ENST00000538375 FBXO41Q8TF61 875 aa20.26■□□□□ 0.83
COPS7A-207ENST00000538375 ESF1Q9H501 851 aaKnown RBP20.26■□□□□ 0.83
COPS7A-207ENST00000538375 SIGLEC1Q9BZZ2 1709 aa20.26■□□□□ 0.83
COPS7A-207ENST00000538375 INO80Q9ULG1 1556 aaPredicted RBP20.25■□□□□ 0.83
COPS7A-207ENST00000538375 CHIC2Q9UKJ5 165 aa20.24■□□□□ 0.83
COPS7A-207ENST00000538375 A2MP01023 1474 aa20.24■□□□□ 0.83
COPS7A-207ENST00000538375 GGT6Q6P531 493 aa20.23■□□□□ 0.83
COPS7A-207ENST00000538375 ABCC5O15440 1437 aa20.21■□□□□ 0.83
COPS7A-207ENST00000538375 TCOF1Q13428 1488 aaKnown RBP20.21■□□□□ 0.83
COPS7A-207ENST00000538375 REREQ9P2R6 1566 aa20.21■□□□□ 0.83
COPS7A-207ENST00000538375 ITGAEP38570 1179 aa20.2■□□□□ 0.82
COPS7A-207ENST00000538375 RRP7BPQ9NSQ0 103 aa20.2■□□□□ 0.82
COPS7A-207ENST00000538375 DHX29Q7Z478 1369 aaKnown RBP20.2■□□□□ 0.82
COPS7A-207ENST00000538375 RIMS1Q86UR5 1692 aaKnown RBP20.19■□□□□ 0.82
COPS7A-207ENST00000538375 DAPK1P53355 1430 aa20.19■□□□□ 0.82
COPS7A-207ENST00000538375 KIF3BO15066 747 aa20.19■□□□□ 0.82
COPS7A-207ENST00000538375 AGLP35573 1532 aa20.18■□□□□ 0.82
COPS7A-207ENST00000538375 ADGBQ8N7X0 1667 aa20.17■□□□□ 0.82
COPS7A-207ENST00000538375 HSPA2P54652 639 aa20.16■□□□□ 0.82
COPS7A-207ENST00000538375 CEBPAP49715 358 aaPredicted RBP20.15■□□□□ 0.82
COPS7A-207ENST00000538375 DNMT1P26358 1616 aaKnown RBP20.13■□□□□ 0.81
COPS7A-207ENST00000538375 MAST1Q9Y2H9 1570 aa20.13■□□□□ 0.81
COPS7A-207ENST00000538375 ANKRD30AQ9BXX3 1397 aa20.12■□□□□ 0.81
COPS7A-207ENST00000538375 FER1L4A9Z1Z3 1794 aa20.12■□□□□ 0.81
COPS7A-207ENST00000538375 SHANK2Q9UPX8 1470 aa20.11■□□□□ 0.81
COPS7A-207ENST00000538375 KIF15Q9NS87 1388 aa20.1■□□□□ 0.81
COPS7A-207ENST00000538375 PLXNC1O60486 1568 aa20.1■□□□□ 0.81
COPS7A-207ENST00000538375 CROCC2H7BZ55 1655 aa20.08■□□□□ 0.81
COPS7A-207ENST00000538375 PPP6R1Q9UPN7 881 aa20.08■□□□□ 0.81
COPS7A-207ENST00000538375 WASHC2CQ9Y4E1 1318 aa20.06■□□□□ 0.8
COPS7A-207ENST00000538375 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms