RNA–Protein interactions for RNA: ENST00000538367.5

TRA2A-211, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRA2A, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-211ENST00000538367 NCOA1Q15788 1441 aa24.13■■□□□ 1.45
TRA2A-211ENST00000538367 CEP170Q5SW79 1584 aa24.13■■□□□ 1.45
TRA2A-211ENST00000538367 CHD1O14646 1710 aa24.12■■□□□ 1.45
TRA2A-211ENST00000538367 CASKIN1Q8WXD9 1431 aa24.12■■□□□ 1.45
TRA2A-211ENST00000538367 KIAA0586Q9BVV6 1533 aa24.12■■□□□ 1.45
TRA2A-211ENST00000538367 HECW1Q76N89 1606 aa24.12■■□□□ 1.45
TRA2A-211ENST00000538367 SAMD9Q5K651 1589 aa24.11■■□□□ 1.45
TRA2A-211ENST00000538367 PRKRIP1Q9H875 184 aaPredicted RBP24.11■■□□□ 1.45
TRA2A-211ENST00000538367 UBE2Q2Q8WVN8 375 aa24.1■■□□□ 1.45
TRA2A-211ENST00000538367 NUP160Q12769 1436 aa24.09■■□□□ 1.45
TRA2A-211ENST00000538367 HSPA5P11021 654 aaKnown RBP24.08■■□□□ 1.45
TRA2A-211ENST00000538367 WASHC2CQ9Y4E1 1318 aa24.08■■□□□ 1.44
TRA2A-211ENST00000538367 FMN1Q68DA7 1419 aa24.07■■□□□ 1.44
TRA2A-211ENST00000538367 EIF4G2P78344 907 aaKnown RBP eCLIP24.07■■□□□ 1.44
TRA2A-211ENST00000538367 NAIPQ13075 1403 aa24.06■■□□□ 1.44
TRA2A-211ENST00000538367 CCDC7Q96M83 1385 aa24.05■■□□□ 1.44
TRA2A-211ENST00000538367 UGGT2Q9NYU1 1516 aa24.04■■□□□ 1.44
TRA2A-211ENST00000538367 CCDC136Q96JN2 1154 aa24.04■■□□□ 1.44
TRA2A-211ENST00000538367 MRS2Q9HD23 443 aa24.04■■□□□ 1.44
TRA2A-211ENST00000538367 GCC2Q8IWJ2 1684 aa24.03■■□□□ 1.44
TRA2A-211ENST00000538367 P3H3Q8IVL6 736 aa24.03■■□□□ 1.44
TRA2A-211ENST00000538367 FHOD3Q2V2M9 1422 aa24.03■■□□□ 1.44
TRA2A-211ENST00000538367 IL27Q8NEV9 243 aa24.02■■□□□ 1.44
TRA2A-211ENST00000538367 NUDCQ9Y266 331 aa24.01■■□□□ 1.43
TRA2A-211ENST00000538367 AKNAQ7Z591 1439 aa24■■□□□ 1.43
TRA2A-211ENST00000538367 PPM1GO15355 546 aaPredicted RBP23.99■■□□□ 1.43
TRA2A-211ENST00000538367 CCDC184Q52MB2 194 aa23.99■■□□□ 1.43
TRA2A-211ENST00000538367 PTPRKQ15262 1439 aa23.96■■□□□ 1.43
TRA2A-211ENST00000538367 FAM9BQ8IZU0 186 aa23.96■■□□□ 1.43
TRA2A-211ENST00000538367 KIAA0556O60303 1618 aa23.93■■□□□ 1.42
TRA2A-211ENST00000538367 TCERG1O14776 1098 aaKnown RBP23.92■■□□□ 1.42
TRA2A-211ENST00000538367 DISP1Q96F81 1524 aa23.91■■□□□ 1.42
TRA2A-211ENST00000538367 MYOM3Q5VTT5 1437 aa23.91■■□□□ 1.42
TRA2A-211ENST00000538367 MS4A1P11836 297 aa23.89■■□□□ 1.41
TRA2A-211ENST00000538367 SUPT6HQ7KZ85 1726 aaKnown RBP23.88■■□□□ 1.41
TRA2A-211ENST00000538367 NEFMP07197 916 aa23.87■■□□□ 1.41
TRA2A-211ENST00000538367 JPH4Q96JJ6 628 aa23.87■■□□□ 1.41
TRA2A-211ENST00000538367 DENND4BO75064 1496 aaPredicted RBP23.86■■□□□ 1.41
TRA2A-211ENST00000538367 EHBP1L1Q8N3D4 1523 aa23.85■■□□□ 1.41
TRA2A-211ENST00000538367 SPATA31E1Q6ZUB1 1445 aa23.85■■□□□ 1.41
TRA2A-211ENST00000538367 CARMIL2Q6F5E8 1435 aa23.84■■□□□ 1.41
TRA2A-211ENST00000538367 TCOF1Q13428 1488 aaKnown RBP23.83■■□□□ 1.41
TRA2A-211ENST00000538367 MIA2Q96PC5 1412 aa23.82■■□□□ 1.4
TRA2A-211ENST00000538367 SHROOM2Q13796 1616 aa23.82■■□□□ 1.4
TRA2A-211ENST00000538367 ARHGEF11O15085 1522 aa23.81■■□□□ 1.4
TRA2A-211ENST00000538367 MTUS2Q5JR59 1369 aa23.81■■□□□ 1.4
TRA2A-211ENST00000538367 DDRGK1Q96HY6 314 aa23.8■■□□□ 1.4
TRA2A-211ENST00000538367 CLASP1Q7Z460 1538 aa23.8■■□□□ 1.4
TRA2A-211ENST00000538367 KIF7Q2M1P5 1343 aa23.77■■□□□ 1.4
TRA2A-211ENST00000538367 TEX14Q8IWB6 1497 aa23.77■■□□□ 1.4
TRA2A-211ENST00000538367 RTN4Q9NQC3 1192 aaKnown RBP23.77■■□□□ 1.4
TRA2A-211ENST00000538367 ATP1B4Q9UN42 357 aaPredicted RBP23.77■■□□□ 1.4
TRA2A-211ENST00000538367 RPRD2Q5VT52 1461 aaKnown RBP23.76■■□□□ 1.39
TRA2A-211ENST00000538367 BACH2Q9BYV9 841 aa23.75■■□□□ 1.39
TRA2A-211ENST00000538367 DHX29Q7Z478 1369 aaKnown RBP23.75■■□□□ 1.39
TRA2A-211ENST00000538367 PRG4Q92954 1404 aaPredicted RBP23.75■■□□□ 1.39
TRA2A-211ENST00000538367 LRRIQ1Q96JM4 1722 aa23.75■■□□□ 1.39
TRA2A-211ENST00000538367 ARID4BQ4LE39 1312 aaPredicted RBP23.74■■□□□ 1.39
TRA2A-211ENST00000538367 PDE4AP27815 886 aa23.74■■□□□ 1.39
TRA2A-211ENST00000538367 GSE1Q14687 1217 aa23.74■■□□□ 1.39
TRA2A-211ENST00000538367 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.7■■□□□ 1.38
TRA2A-211ENST00000538367 RAPGEF6Q8TEU7 1601 aa23.69■■□□□ 1.38
TRA2A-211ENST00000538367 L3MBTL2Q969R5 705 aa23.69■■□□□ 1.38
TRA2A-211ENST00000538367 LAS1LQ9Y4W2 734 aaKnown RBP23.68■■□□□ 1.38
TRA2A-211ENST00000538367 RSPH6AQ9H0K4 717 aa23.68■■□□□ 1.38
TRA2A-211ENST00000538367 KTN1Q86UP2 1357 aaKnown RBP23.67■■□□□ 1.38
TRA2A-211ENST00000538367 RRP1P56182 461 aaKnown RBP23.66■■□□□ 1.38
TRA2A-211ENST00000538367 LRPPRCP42704 1394 aaKnown RBP23.66■■□□□ 1.38
TRA2A-211ENST00000538367 ROCK2O75116 1388 aaKnown RBP23.66■■□□□ 1.38
TRA2A-211ENST00000538367 ANKRD30BQ9BXX2 1392 aa23.63■■□□□ 1.37
TRA2A-211ENST00000538367 NPM2Q86SE8 214 aaKnown RBP23.62■■□□□ 1.37
TRA2A-211ENST00000538367 EPRSP07814 1512 aaKnown RBP23.62■■□□□ 1.37
TRA2A-211ENST00000538367 MPHOSPH9Q99550 1183 aa23.62■■□□□ 1.37
TRA2A-211ENST00000538367 ERCC6L2Q5T890 1561 aa23.62■■□□□ 1.37
TRA2A-211ENST00000538367 PNISRQ8TF01 805 aaKnown RBP23.61■■□□□ 1.37
TRA2A-211ENST00000538367 KDM6BO15054 1643 aa23.61■■□□□ 1.37
TRA2A-211ENST00000538367 OSCARQ8IYS5 282 aa23.6■■□□□ 1.37
TRA2A-211ENST00000538367 PLB1Q6P1J6 1458 aa23.6■■□□□ 1.37
TRA2A-211ENST00000538367 FAM43AQ8N2R8 423 aa23.6■■□□□ 1.37
TRA2A-211ENST00000538367 BRPF3Q9ULD4 1205 aa23.59■■□□□ 1.37
TRA2A-211ENST00000538367 PTPRGP23470 1445 aa23.59■■□□□ 1.37
TRA2A-211ENST00000538367 NUP153P49790 1475 aaKnown RBP23.59■■□□□ 1.37
TRA2A-211ENST00000538367 MBD5Q9P267 1494 aa23.58■■□□□ 1.37
TRA2A-211ENST00000538367 ABCA8O94911 1581 aa23.58■■□□□ 1.37
TRA2A-211ENST00000538367 PDE3BQ13370 1112 aa23.57■■□□□ 1.36
TRA2A-211ENST00000538367 BRD4O60885 1362 aaPredicted RBP23.57■■□□□ 1.36
TRA2A-211ENST00000538367 KIF14Q15058 1648 aa23.57■■□□□ 1.36
TRA2A-211ENST00000538367 ROCK1Q13464 1354 aa23.56■■□□□ 1.36
TRA2A-211ENST00000538367 CDK13Q14004 1512 aaKnown RBP23.56■■□□□ 1.36
TRA2A-211ENST00000538367 NBPF8Q3BBV2 869 aa23.56■■□□□ 1.36
TRA2A-211ENST00000538367 NFKBIBQ15653 356 aa23.55■■□□□ 1.36
TRA2A-211ENST00000538367 BCORL1Q5H9F3 1711 aa23.54■■□□□ 1.36
TRA2A-211ENST00000538367 ZMYM4Q5VZL5 1548 aa23.54■■□□□ 1.36
TRA2A-211ENST00000538367 INSRP06213 1382 aa23.53■■□□□ 1.36
TRA2A-211ENST00000538367 KDM5CP41229 1560 aa23.53■■□□□ 1.36
TRA2A-211ENST00000538367 EXOC6Q8TAG9 804 aa23.52■■□□□ 1.36
TRA2A-211ENST00000538367 RCAN3Q9UKA8 241 aa23.51■■□□□ 1.35
TRA2A-211ENST00000538367 KIF15Q9NS87 1388 aa23.51■■□□□ 1.35
TRA2A-211ENST00000538367 MAGI3Q5TCQ9 1506 aa23.49■■□□□ 1.35
TRA2A-211ENST00000538367 ARID3CA6NKF2 412 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms