RNA–Protein interactions for RNA: ENST00000536226.1

CRNKL1-207, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRNKL1, Length 4,009 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-207ENST00000536226 DDRGK1Q96HY6 314 aa10.69□□□□□ -0.7
CRNKL1-207ENST00000536226 DNTTIP2Q5QJE6 756 aaKnown RBP10.68□□□□□ -0.7
CRNKL1-207ENST00000536226 CFAP43Q8NDM7 1665 aa10.68□□□□□ -0.7
CRNKL1-207ENST00000536226 VPS8Q8N3P4 1428 aa10.67□□□□□ -0.7
CRNKL1-207ENST00000536226 PPP4R2Q9NY27 417 aa10.67□□□□□ -0.7
CRNKL1-207ENST00000536226 C11orf95C9JLR9 678 aaPredicted RBP10.66□□□□□ -0.7
CRNKL1-207ENST00000536226 ADAMTS12P58397 1594 aa10.65□□□□□ -0.7
CRNKL1-207ENST00000536226 IPO4Q8TEX9 1081 aaKnown RBP10.65□□□□□ -0.71
CRNKL1-207ENST00000536226 ANP32CO43423 234 aa10.63□□□□□ -0.71
CRNKL1-207ENST00000536226 MAP7D2Q96T17 732 aa10.63□□□□□ -0.71
CRNKL1-207ENST00000536226 MRC2Q9UBG0 1479 aa10.63□□□□□ -0.71
CRNKL1-207ENST00000536226 BCCIPQ9P287 314 aaKnown RBP eCLIP10.62□□□□□ -0.71
CRNKL1-207ENST00000536226 PDS5BQ9NTI5 1447 aa10.62□□□□□ -0.71
CRNKL1-207ENST00000536226 EIF4G3O43432 1585 aaKnown RBP10.61□□□□□ -0.71
CRNKL1-207ENST00000536226 PTMAP06454 111 aaKnown RBP10.61□□□□□ -0.71
CRNKL1-207ENST00000536226 CALD1Q05682 793 aaKnown RBP10.61□□□□□ -0.71
CRNKL1-207ENST00000536226 PCF11O94913 1555 aaKnown RBP10.6□□□□□ -0.71
CRNKL1-207ENST00000536226 IRX6P78412 446 aaPredicted RBP10.6□□□□□ -0.71
CRNKL1-207ENST00000536226 PATL2C9JE40 543 aaKnown RBP10.6□□□□□ -0.71
CRNKL1-207ENST00000536226 TRIM52Q96A61 297 aa10.6□□□□□ -0.71
CRNKL1-207ENST00000536226 FTSJ3Q8IY81 847 aaKnown RBP10.59□□□□□ -0.71
CRNKL1-207ENST00000536226 PDCL3Q9H2J4 239 aa10.59□□□□□ -0.71
CRNKL1-207ENST00000536226 SNAPC4Q5SXM2 1469 aa10.59□□□□□ -0.71
CRNKL1-207ENST00000536226 MAP3K1Q13233 1512 aa10.59□□□□□ -0.71
CRNKL1-207ENST00000536226 TPM2P07951 284 aa10.58□□□□□ -0.72
CRNKL1-207ENST00000536226 RGS3P49796 1198 aa10.58□□□□□ -0.72
CRNKL1-207ENST00000536226 RSPH4AQ5TD94 716 aa10.58□□□□□ -0.72
CRNKL1-207ENST00000536226 HMGB1P09429 215 aaKnown RBP10.57□□□□□ -0.72
CRNKL1-207ENST00000536226 ZNF608Q9ULD9 1512 aaPredicted RBP10.57□□□□□ -0.72
CRNKL1-207ENST00000536226 TIAM1Q13009 1591 aa10.57□□□□□ -0.72
CRNKL1-207ENST00000536226 CCDC9Q9Y3X0 531 aaKnown RBP10.56□□□□□ -0.72
CRNKL1-207ENST00000536226 CARMIL1Q5VZK9 1371 aa10.56□□□□□ -0.72
CRNKL1-207ENST00000536226 GAPVD1Q14C86 1478 aa10.56□□□□□ -0.72
CRNKL1-207ENST00000536226 PAK3O75914 559 aaPredicted RBP10.55□□□□□ -0.72
CRNKL1-207ENST00000536226 EFCAB5A4FU69 1503 aa10.55□□□□□ -0.72
CRNKL1-207ENST00000536226 IRX3P78415 501 aaPredicted RBP10.53□□□□□ -0.72
CRNKL1-207ENST00000536226 PLCD3Q8N3E9 789 aa10.53□□□□□ -0.72
CRNKL1-207ENST00000536226 MTERF4Q7Z6M4 381 aaKnown RBP10.53□□□□□ -0.72
CRNKL1-207ENST00000536226 FBXO3Q9UK99 471 aa10.52□□□□□ -0.72
CRNKL1-207ENST00000536226 HNRNPUL2Q1KMD3 747 aaKnown RBP10.52□□□□□ -0.73
CRNKL1-207ENST00000536226 WWC1Q8IX03 1113 aa10.52□□□□□ -0.73
CRNKL1-207ENST00000536226 TAF3Q5VWG9 929 aa10.51□□□□□ -0.73
CRNKL1-207ENST00000536226 AQRO60306 1485 aaKnown RBP eCLIP10.51□□□□□ -0.737e-7■■■■□ 20
CRNKL1-207ENST00000536226 HNRNPUQ00839 825 aaKnown RBP eCLIP10.51□□□□□ -0.73
CRNKL1-207ENST00000536226 TNNT3P45378 269 aaPredicted RBP10.51□□□□□ -0.73
CRNKL1-207ENST00000536226 ZFP91Q96JP5 570 aaPredicted RBP10.5□□□□□ -0.73
CRNKL1-207ENST00000536226 CEP170Q5SW79 1584 aa10.5□□□□□ -0.73
CRNKL1-207ENST00000536226 IFT140Q96RY7 1462 aa10.5□□□□□ -0.73
CRNKL1-207ENST00000536226 TPRNQ4KMQ1 711 aa10.49□□□□□ -0.73
CRNKL1-207ENST00000536226 ARHGEF11O15085 1522 aa10.49□□□□□ -0.73
CRNKL1-207ENST00000536226 MAGI3Q5TCQ9 1506 aa10.49□□□□□ -0.73
CRNKL1-207ENST00000536226 GRIN2BQ13224 1484 aa10.49□□□□□ -0.73
CRNKL1-207ENST00000536226 RRBP1Q9P2E9 1410 aaKnown RBP10.49□□□□□ -0.73
CRNKL1-207ENST00000536226 TDRD9Q8NDG6 1382 aaKnown RBP10.49□□□□□ -0.73
CRNKL1-207ENST00000536226 FRAT1Q92837 279 aaPredicted RBP10.48□□□□□ -0.73
CRNKL1-207ENST00000536226 ARID3AQ99856 593 aa10.48□□□□□ -0.73
CRNKL1-207ENST00000536226 CLGNO14967 610 aa10.47□□□□□ -0.73
CRNKL1-207ENST00000536226 B4GALNT3Q6L9W6 998 aa10.47□□□□□ -0.73
CRNKL1-207ENST00000536226 UGGT2Q9NYU1 1516 aa10.47□□□□□ -0.73
CRNKL1-207ENST00000536226 WASHC2CQ9Y4E1 1318 aa10.46□□□□□ -0.73
CRNKL1-207ENST00000536226 FYCO1Q9BQS8 1478 aa10.46□□□□□ -0.74
CRNKL1-207ENST00000536226 UBTFP17480 764 aaKnown RBP10.46□□□□□ -0.74
CRNKL1-207ENST00000536226 TEX2Q8IWB9 1127 aa10.45□□□□□ -0.74
CRNKL1-207ENST00000536226 ZHX1Q9UKY1 873 aaPredicted RBP10.45□□□□□ -0.74
CRNKL1-207ENST00000536226 IQGAP2Q13576 1575 aa10.45□□□□□ -0.74
CRNKL1-207ENST00000536226 DISP1Q96F81 1524 aa10.45□□□□□ -0.74
CRNKL1-207ENST00000536226 FAM13BQ9NYF5 915 aa10.45□□□□□ -0.74
CRNKL1-207ENST00000536226 KANK4Q5T7N3 995 aaPredicted RBP10.44□□□□□ -0.74
CRNKL1-207ENST00000536226 MSNP26038 577 aaKnown RBP10.44□□□□□ -0.74
CRNKL1-207ENST00000536226 WASHC2AQ641Q2 1341 aa10.44□□□□□ -0.74
CRNKL1-207ENST00000536226 FHAD1B1AJZ9 1412 aa10.44□□□□□ -0.74
CRNKL1-207ENST00000536226 LRRC9Q6ZRR7 1453 aa10.44□□□□□ -0.74
CRNKL1-207ENST00000536226 KIAA0556O60303 1618 aa10.43□□□□□ -0.74
CRNKL1-207ENST00000536226 FAM193AP78312 1265 aa10.43□□□□□ -0.74
CRNKL1-207ENST00000536226 CASKIN1Q8WXD9 1431 aa10.42□□□□□ -0.74
CRNKL1-207ENST00000536226 CC2D1BQ5T0F9 858 aaKnown RBP10.42□□□□□ -0.74
CRNKL1-207ENST00000536226 CNPY4Q8N129 248 aa10.42□□□□□ -0.74
CRNKL1-207ENST00000536226 TAOK2Q9UL54 1235 aa10.42□□□□□ -0.74
CRNKL1-207ENST00000536226 GOLGA6L3A6NEY3 463 aa10.42□□□□□ -0.74
CRNKL1-207ENST00000536226 FHOD3Q2V2M9 1422 aa10.41□□□□□ -0.74
CRNKL1-207ENST00000536226 SAMD1Q6SPF0 538 aaPredicted RBP10.41□□□□□ -0.74
CRNKL1-207ENST00000536226 SMAP1Q8IYB5 467 aaPredicted RBP10.4□□□□□ -0.74
CRNKL1-207ENST00000536226 SHROOM2Q13796 1616 aa10.4□□□□□ -0.74
CRNKL1-207ENST00000536226 GRIN2AQ12879 1464 aa10.4□□□□□ -0.75
CRNKL1-207ENST00000536226 AXDND1Q5T1B0 1012 aaPredicted RBP10.4□□□□□ -0.75
CRNKL1-207ENST00000536226 CHD1O14646 1710 aa10.39□□□□□ -0.75
CRNKL1-207ENST00000536226 PLCD4Q9BRC7 762 aa10.39□□□□□ -0.75
CRNKL1-207ENST00000536226 MYH16Q9H6N6 1097 aa10.39□□□□□ -0.75
CRNKL1-207ENST00000536226 NFKBIBQ15653 356 aa10.38□□□□□ -0.75
CRNKL1-207ENST00000536226 DDX10Q13206 875 aaKnown RBP10.38□□□□□ -0.75
CRNKL1-207ENST00000536226 MAGI1Q96QZ7 1491 aaPredicted RBP10.38□□□□□ -0.75
CRNKL1-207ENST00000536226 MAPK8IP2Q13387 824 aaPredicted RBP10.38□□□□□ -0.75
CRNKL1-207ENST00000536226 AEBP1Q8IUX7 1158 aa10.38□□□□□ -0.75
CRNKL1-207ENST00000536226 CNKSR2Q8WXI2 1034 aa10.37□□□□□ -0.75
CRNKL1-207ENST00000536226 NUP160Q12769 1436 aa10.37□□□□□ -0.75
CRNKL1-207ENST00000536226 SECISBP2LQ93073 1101 aaKnown RBP10.37□□□□□ -0.75
CRNKL1-207ENST00000536226 ZNF771Q7L3S4 317 aaPredicted RBP10.37□□□□□ -0.75
CRNKL1-207ENST00000536226 VGLL3A8MV65 326 aa10.36□□□□□ -0.75
CRNKL1-207ENST00000536226 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.36□□□□□ -0.75
CRNKL1-207ENST00000536226 BECN1Q14457 450 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms