RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 UACAQ9BZF9 1416 aa14.84□□□□□ -0.03
AMBRA1-211ENST00000533727 PPM1GO15355 546 aaPredicted RBP14.83□□□□□ -0.03
AMBRA1-211ENST00000533727 SYNJ2O15056 1496 aa14.83□□□□□ -0.04
AMBRA1-211ENST00000533727 ANP32BQ92688 251 aaKnown RBP14.83□□□□□ -0.04
AMBRA1-211ENST00000533727 PRG4Q92954 1404 aaPredicted RBP14.83□□□□□ -0.04
AMBRA1-211ENST00000533727 NBR1Q14596 966 aa14.82□□□□□ -0.04
AMBRA1-211ENST00000533727 MPHOSPH9Q99550 1183 aa14.8□□□□□ -0.04
AMBRA1-211ENST00000533727 ANP32EQ9BTT0 268 aa14.8□□□□□ -0.04
AMBRA1-211ENST00000533727 POLA1P09884 1462 aaPredicted RBP14.79□□□□□ -0.04
AMBRA1-211ENST00000533727 UPF2Q9HAU5 1272 aaKnown RBP14.78□□□□□ -0.04
AMBRA1-211ENST00000533727 SALL2Q9Y467 1007 aaPredicted RBP14.78□□□□□ -0.04
AMBRA1-211ENST00000533727 MYOM3Q5VTT5 1437 aa14.77□□□□□ -0.05
AMBRA1-211ENST00000533727 SNAPC4Q5SXM2 1469 aa14.77□□□□□ -0.05
AMBRA1-211ENST00000533727 STK26Q9P289 416 aa14.77□□□□□ -0.05
AMBRA1-211ENST00000533727 CUX1P39880 1505 aa14.76□□□□□ -0.05
AMBRA1-211ENST00000533727 SIN3AQ96ST3 1273 aa14.76□□□□□ -0.05
AMBRA1-211ENST00000533727 ERICH3Q5RHP9 1530 aa14.75□□□□□ -0.05
AMBRA1-211ENST00000533727 VGFO15240 615 aaPredicted RBP14.75□□□□□ -0.05
AMBRA1-211ENST00000533727 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.75□□□□□ -0.05
AMBRA1-211ENST00000533727 DNAJC5BQ9UF47 199 aa14.73□□□□□ -0.05
AMBRA1-211ENST00000533727 CHMP4BQ9H444 224 aaKnown RBP14.73□□□□□ -0.05
AMBRA1-211ENST00000533727 RUSC2Q8N2Y8 1516 aa14.73□□□□□ -0.05
AMBRA1-211ENST00000533727 EFCAB5A4FU69 1503 aa14.72□□□□□ -0.05
AMBRA1-211ENST00000533727 TERF2IPQ9NYB0 399 aa14.72□□□□□ -0.05
AMBRA1-211ENST00000533727 TOP2BQ02880 1626 aa14.72□□□□□ -0.05
AMBRA1-211ENST00000533727 ROCK2O75116 1388 aaKnown RBP14.72□□□□□ -0.05
AMBRA1-211ENST00000533727 CHMP4AQ9BY43 222 aa14.72□□□□□ -0.05
AMBRA1-211ENST00000533727 MORC1Q86VD1 984 aa14.71□□□□□ -0.05
AMBRA1-211ENST00000533727 HIRIP3Q9BW71 556 aaPredicted RBP14.71□□□□□ -0.05
AMBRA1-211ENST00000533727 PLEKHH2Q8IVE3 1493 aa14.71□□□□□ -0.05
AMBRA1-211ENST00000533727 RAB3GAP2Q9H2M9 1393 aa14.71□□□□□ -0.06
AMBRA1-211ENST00000533727 CCDC144AA2RUR9 1427 aa14.71□□□□□ -0.06
AMBRA1-211ENST00000533727 SAFB2Q14151 953 aaKnown RBP eCLIP14.7□□□□□ -0.06
AMBRA1-211ENST00000533727 STAC3Q96MF2 364 aa14.7□□□□□ -0.06
AMBRA1-211ENST00000533727 ARXQ96QS3 562 aa14.7□□□□□ -0.06
AMBRA1-211ENST00000533727 NPHP1O15259 732 aa14.7□□□□□ -0.06
AMBRA1-211ENST00000533727 CASKIN1Q8WXD9 1431 aa14.7□□□□□ -0.06
AMBRA1-211ENST00000533727 PRDM2Q13029 1718 aa14.7□□□□□ -0.06
AMBRA1-211ENST00000533727 MAGI1Q96QZ7 1491 aaPredicted RBP14.69□□□□□ -0.06
AMBRA1-211ENST00000533727 PAK3O75914 559 aaPredicted RBP14.69□□□□□ -0.06
AMBRA1-211ENST00000533727 MS4A1P11836 297 aa14.68□□□□□ -0.06
AMBRA1-211ENST00000533727 U2SURPO15042 1029 aaKnown RBP14.68□□□□□ -0.06
AMBRA1-211ENST00000533727 CSB-PGBD3P0DP91 1061 aa14.68□□□□□ -0.06
AMBRA1-211ENST00000533727 KIAA0586Q9BVV6 1533 aa14.68□□□□□ -0.06
AMBRA1-211ENST00000533727 ABCA10Q8WWZ4 1543 aa14.67□□□□□ -0.06
AMBRA1-211ENST00000533727 POGZQ7Z3K3 1410 aa14.67□□□□□ -0.06
AMBRA1-211ENST00000533727 PEG3Q9GZU2 1588 aa14.66□□□□□ -0.06
AMBRA1-211ENST00000533727 NGDNQ8NEJ9 315 aaKnown RBP14.66□□□□□ -0.06
AMBRA1-211ENST00000533727 CCDC136Q96JN2 1154 aa14.66□□□□□ -0.06
AMBRA1-211ENST00000533727 FYCO1Q9BQS8 1478 aa14.66□□□□□ -0.06
AMBRA1-211ENST00000533727 KIF21BO75037 1637 aa14.65□□□□□ -0.06
AMBRA1-211ENST00000533727 ARHGAP5Q13017 1502 aa14.65□□□□□ -0.06
AMBRA1-211ENST00000533727 RTF1Q92541 710 aaKnown RBP14.64□□□□□ -0.07
AMBRA1-211ENST00000533727 HSP90AA1P07900 732 aaKnown RBP14.63□□□□□ -0.07
AMBRA1-211ENST00000533727 CALD1Q05682 793 aaKnown RBP14.63□□□□□ -0.07
AMBRA1-211ENST00000533727 SYNJ1O43426 1573 aa14.63□□□□□ -0.07
AMBRA1-211ENST00000533727 MIER1Q8N108 512 aa14.63□□□□□ -0.07
AMBRA1-211ENST00000533727 TNNT2P45379 298 aaPredicted RBP14.62□□□□□ -0.07
AMBRA1-211ENST00000533727 KIF15Q9NS87 1388 aa14.61□□□□□ -0.07
AMBRA1-211ENST00000533727 CC2D1BQ5T0F9 858 aaKnown RBP14.61□□□□□ -0.07
AMBRA1-211ENST00000533727 KTN1Q86UP2 1357 aaKnown RBP14.61□□□□□ -0.07
AMBRA1-211ENST00000533727 SOX12O15370 315 aa14.6□□□□□ -0.07
AMBRA1-211ENST00000533727 FOXD1Q16676 465 aa14.6□□□□□ -0.07
AMBRA1-211ENST00000533727 CCDC9Q9Y3X0 531 aaKnown RBP14.6□□□□□ -0.07
AMBRA1-211ENST00000533727 LAS1LQ9Y4W2 734 aaKnown RBP14.59□□□□□ -0.07
AMBRA1-211ENST00000533727 FTSJ3Q8IY81 847 aaKnown RBP14.59□□□□□ -0.07
AMBRA1-211ENST00000533727 FGD6Q6ZV73 1430 aa14.58□□□□□ -0.08
AMBRA1-211ENST00000533727 TROQ12816 1431 aaPredicted RBP14.57□□□□□ -0.08
AMBRA1-211ENST00000533727 PRXQ9BXM0 1461 aa14.56□□□□□ -0.08
AMBRA1-211ENST00000533727 HECW1Q76N89 1606 aa14.56□□□□□ -0.08
AMBRA1-211ENST00000533727 CUL7Q14999 1698 aa14.56□□□□□ -0.08
AMBRA1-211ENST00000533727 HSPA5P11021 654 aaKnown RBP14.56□□□□□ -0.08
AMBRA1-211ENST00000533727 NEUROD2Q15784 382 aa14.56□□□□□ -0.08
AMBRA1-211ENST00000533727 EVC2Q86UK5 1308 aa14.55□□□□□ -0.08
AMBRA1-211ENST00000533727 RALBP1Q15311 655 aa14.55□□□□□ -0.08
AMBRA1-211ENST00000533727 GRIN2AQ12879 1464 aa14.53□□□□□ -0.08
AMBRA1-211ENST00000533727 LRRC9Q6ZRR7 1453 aa14.53□□□□□ -0.08
AMBRA1-211ENST00000533727 EHBP1L1Q8N3D4 1523 aa14.53□□□□□ -0.08
AMBRA1-211ENST00000533727 NCOA2Q15596 1464 aa14.53□□□□□ -0.08
AMBRA1-211ENST00000533727 IQGAP2Q13576 1575 aa14.53□□□□□ -0.08
AMBRA1-211ENST00000533727 L3MBTL2Q969R5 705 aa14.53□□□□□ -0.08
AMBRA1-211ENST00000533727 ANKRD50Q9ULJ7 1429 aa14.52□□□□□ -0.09
AMBRA1-211ENST00000533727 AMPHP49418 695 aa14.52□□□□□ -0.09
AMBRA1-211ENST00000533727 THEMISQ8N1K5 641 aaPredicted RBP14.52□□□□□ -0.09
AMBRA1-211ENST00000533727 NUTM2DQ5VT03 806 aaPredicted RBP14.51□□□□□ -0.09
AMBRA1-211ENST00000533727 ATF3P18847 181 aa14.51□□□□□ -0.09
AMBRA1-211ENST00000533727 CASC1Q6TDU7 716 aa14.51□□□□□ -0.09
AMBRA1-211ENST00000533727 TRAK1Q9UPV9 953 aa14.51□□□□□ -0.09
AMBRA1-211ENST00000533727 MIA2Q96PC5 1412 aa14.51□□□□□ -0.09
AMBRA1-211ENST00000533727 LMOD3Q0VAK6 560 aa14.5□□□□□ -0.09
AMBRA1-211ENST00000533727 ERICH6BQ5W0A0 696 aa14.5□□□□□ -0.09
AMBRA1-211ENST00000533727 DHX57Q6P158 1386 aaKnown RBP14.5□□□□□ -0.09
AMBRA1-211ENST00000533727 TMX4Q9H1E5 349 aaPredicted RBP14.49□□□□□ -0.09
AMBRA1-211ENST00000533727 HDAC5Q9UQL6 1122 aa14.49□□□□□ -0.09
AMBRA1-211ENST00000533727 UNC13AQ9UPW8 1703 aa14.49□□□□□ -0.09
AMBRA1-211ENST00000533727 IRX6P78412 446 aaPredicted RBP14.48□□□□□ -0.09
AMBRA1-211ENST00000533727 AFAP1Q8N556 730 aa14.48□□□□□ -0.09
AMBRA1-211ENST00000533727 GOLGA2Q08379 1002 aa14.48□□□□□ -0.09
AMBRA1-211ENST00000533727 URB2Q14146 1524 aaKnown RBP14.48□□□□□ -0.09
AMBRA1-211ENST00000533727 DDRGK1Q96HY6 314 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms