RNA–Protein interactions for RNA: ENST00000530758.1

BRK1-201, Transcript of BRICK1, SCAR/WAVE actin nucleating complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRK1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRK1-201ENST00000530758 NEO1Q92859 1461 aa25.03■■□□□ 1.6
BRK1-201ENST00000530758 AEBP2Q6ZN18 517 aaPredicted RBP25■■□□□ 1.59
BRK1-201ENST00000530758 CCNB3Q8WWL7 1395 aa25■■□□□ 1.59
BRK1-201ENST00000530758 CFAP74Q9C0B2 1584 aa25■■□□□ 1.59
BRK1-201ENST00000530758 FANCAO15360 1455 aa24.99■■□□□ 1.59
BRK1-201ENST00000530758 EFCAB2Q5VUJ9 269 aa24.99■■□□□ 1.59
BRK1-201ENST00000530758 KDM4FA0A1W2PPD8 638 aa24.98■■□□□ 1.59
BRK1-201ENST00000530758 ITSN2Q9NZM3 1697 aa24.97■■□□□ 1.59
BRK1-201ENST00000530758 AKNAQ7Z591 1439 aa24.95■■□□□ 1.59
BRK1-201ENST00000530758 ARHGAP5Q13017 1502 aa24.95■■□□□ 1.58
BRK1-201ENST00000530758 CFDP1Q9UEE9 299 aaPredicted RBP24.92■■□□□ 1.58
BRK1-201ENST00000530758 MYOM3Q5VTT5 1437 aa24.9■■□□□ 1.58
BRK1-201ENST00000530758 FRMPD1Q5SYB0 1578 aa24.89■■□□□ 1.58
BRK1-201ENST00000530758 MIA2Q96PC5 1412 aa24.88■■□□□ 1.57
BRK1-201ENST00000530758 SAMD9LQ8IVG5 1584 aa24.87■■□□□ 1.57
BRK1-201ENST00000530758 ADGRL1O94910 1474 aa24.85■■□□□ 1.57
BRK1-201ENST00000530758 KIAA1107Q9UPP5 1409 aa24.85■■□□□ 1.57
BRK1-201ENST00000530758 SCAPERQ9BY12 1400 aa24.84■■□□□ 1.57
BRK1-201ENST00000530758 PLEKHH2Q8IVE3 1493 aa24.83■■□□□ 1.57
BRK1-201ENST00000530758 ABCC1P33527 1531 aa24.83■■□□□ 1.57
BRK1-201ENST00000530758 DENND4BO75064 1496 aaPredicted RBP24.83■■□□□ 1.56
BRK1-201ENST00000530758 RAPGEF3O95398 923 aa24.82■■□□□ 1.56
BRK1-201ENST00000530758 RICTORQ6R327 1708 aa24.82■■□□□ 1.56
BRK1-201ENST00000530758 ARHGEF12Q9NZN5 1544 aa24.81■■□□□ 1.56
BRK1-201ENST00000530758 PPARGC1BQ86YN6 1023 aaKnown RBP24.8■■□□□ 1.56
BRK1-201ENST00000530758 ZNF777Q9ULD5 760 aaPredicted RBP24.8■■□□□ 1.56
BRK1-201ENST00000530758 ZNF644Q9H582 1327 aaPredicted RBP24.79■■□□□ 1.56
BRK1-201ENST00000530758 FGD6Q6ZV73 1430 aa24.78■■□□□ 1.56
BRK1-201ENST00000530758 POGZQ7Z3K3 1410 aa24.77■■□□□ 1.56
BRK1-201ENST00000530758 CAMSAP2Q08AD1 1489 aa24.77■■□□□ 1.56
BRK1-201ENST00000530758 MBD5Q9P267 1494 aa24.77■■□□□ 1.56
BRK1-201ENST00000530758 TCOF1Q13428 1488 aaKnown RBP24.76■■□□□ 1.55
BRK1-201ENST00000530758 RSPH4AQ5TD94 716 aa24.75■■□□□ 1.55
BRK1-201ENST00000530758 PTPN23Q9H3S7 1636 aa24.75■■□□□ 1.55
BRK1-201ENST00000530758 ZNF518AQ6AHZ1 1483 aa24.74■■□□□ 1.55
BRK1-201ENST00000530758 SYCP2Q9BX26 1530 aa24.74■■□□□ 1.55
BRK1-201ENST00000530758 KDM5CP41229 1560 aa24.73■■□□□ 1.55
BRK1-201ENST00000530758 ZMYM4Q5VZL5 1548 aa24.73■■□□□ 1.55
BRK1-201ENST00000530758 TRAPPC8Q9Y2L5 1435 aa24.73■■□□□ 1.55
BRK1-201ENST00000530758 HNRNPMP52272 730 aaKnown RBP eCLIP24.73■■□□□ 1.55
BRK1-201ENST00000530758 ARHGEF5Q12774 1597 aa24.71■■□□□ 1.55
BRK1-201ENST00000530758 AFAP1Q8N556 730 aa24.71■■□□□ 1.55
BRK1-201ENST00000530758 MAGI2Q86UL8 1455 aa24.7■■□□□ 1.54
BRK1-201ENST00000530758 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.67■■□□□ 1.54
BRK1-201ENST00000530758 MLH3Q9UHC1 1453 aa24.67■■□□□ 1.54
BRK1-201ENST00000530758 ARHGEF40Q8TER5 1519 aa24.66■■□□□ 1.54
BRK1-201ENST00000530758 RRBP1Q9P2E9 1410 aaKnown RBP24.66■■□□□ 1.54
BRK1-201ENST00000530758 CCDC141Q6ZP82 1450 aa24.64■■□□□ 1.54
BRK1-201ENST00000530758 SIGLEC1Q9BZZ2 1709 aa24.62■■□□□ 1.53
BRK1-201ENST00000530758 HECW2Q9P2P5 1572 aa24.62■■□□□ 1.53
BRK1-201ENST00000530758 RTEL1-TNFRSF6BF6WH68 1400 aa24.61■■□□□ 1.53
BRK1-201ENST00000530758 KIDINS220Q9ULH0 1771 aa24.61■■□□□ 1.53
BRK1-201ENST00000530758 DNMT1P26358 1616 aaKnown RBP24.61■■□□□ 1.53
BRK1-201ENST00000530758 YEATS2Q9ULM3 1422 aa24.61■■□□□ 1.53
BRK1-201ENST00000530758 ADAMTSL3P82987 1691 aa24.6■■□□□ 1.53
BRK1-201ENST00000530758 ABCC5O15440 1437 aa24.59■■□□□ 1.53
BRK1-201ENST00000530758 SPAG9O60271 1321 aaKnown RBP24.59■■□□□ 1.53
BRK1-201ENST00000530758 MAST1Q9Y2H9 1570 aa24.59■■□□□ 1.53
BRK1-201ENST00000530758 INO80Q9ULG1 1556 aaPredicted RBP24.58■■□□□ 1.52
BRK1-201ENST00000530758 ZFYVE16Q7Z3T8 1539 aa24.57■■□□□ 1.52
BRK1-201ENST00000530758 TSPY4P0CV99 314 aa24.57■■□□□ 1.52
BRK1-201ENST00000530758 TSPY10P0CW01 314 aa24.57■■□□□ 1.52
BRK1-201ENST00000530758 BCORL1Q5H9F3 1711 aa24.57■■□□□ 1.52
BRK1-201ENST00000530758 DAPK1P53355 1430 aa24.56■■□□□ 1.52
BRK1-201ENST00000530758 CROCC2H7BZ55 1655 aa24.56■■□□□ 1.52
BRK1-201ENST00000530758 FAM50AQ14320 339 aaKnown RBP24.55■■□□□ 1.52
BRK1-201ENST00000530758 SHANK2Q9UPX8 1470 aa24.55■■□□□ 1.52
BRK1-201ENST00000530758 ATP7AQ04656 1500 aa24.55■■□□□ 1.52
BRK1-201ENST00000530758 ATP10AO60312 1499 aa24.52■■□□□ 1.52
BRK1-201ENST00000530758 DIP2CQ9Y2E4 1556 aa24.52■■□□□ 1.52
BRK1-201ENST00000530758 ABCA6Q8N139 1617 aa24.51■■□□□ 1.51
BRK1-201ENST00000530758 REREQ9P2R6 1566 aa24.5■■□□□ 1.51
BRK1-201ENST00000530758 C9orf84Q5VXU9 1444 aa24.5■■□□□ 1.51
BRK1-201ENST00000530758 MADDQ8WXG6 1647 aa24.49■■□□□ 1.51
BRK1-201ENST00000530758 ADGBQ8N7X0 1667 aa24.47■■□□□ 1.51
BRK1-201ENST00000530758 PLXNC1O60486 1568 aa24.46■■□□□ 1.51
BRK1-201ENST00000530758 PTPRKQ15262 1439 aa24.46■■□□□ 1.51
BRK1-201ENST00000530758 MYT1LQ9UL68 1186 aa24.46■■□□□ 1.51
BRK1-201ENST00000530758 ADGRL2O95490 1459 aa24.45■■□□□ 1.5
BRK1-201ENST00000530758 PTPRMP28827 1452 aa24.45■■□□□ 1.5
BRK1-201ENST00000530758 ARID4BQ4LE39 1312 aaPredicted RBP24.44■■□□□ 1.5
BRK1-201ENST00000530758 NCOA1Q15788 1441 aa24.43■■□□□ 1.5
BRK1-201ENST00000530758 AGLP35573 1532 aa24.41■■□□□ 1.5
BRK1-201ENST00000530758 A2MP01023 1474 aa24.41■■□□□ 1.5
BRK1-201ENST00000530758 DHX29Q7Z478 1369 aaKnown RBP24.41■■□□□ 1.5
BRK1-201ENST00000530758 ROCK1Q13464 1354 aa24.4■■□□□ 1.5
BRK1-201ENST00000530758 ANKRD30AQ9BXX3 1397 aa24.4■■□□□ 1.5
BRK1-201ENST00000530758 RIMS1Q86UR5 1692 aaKnown RBP24.4■■□□□ 1.5
BRK1-201ENST00000530758 CHIC2Q9UKJ5 165 aa24.37■■□□□ 1.49
BRK1-201ENST00000530758 DUOX2Q9NRD8 1548 aa24.35■■□□□ 1.49
BRK1-201ENST00000530758 KIF15Q9NS87 1388 aa24.34■■□□□ 1.49
BRK1-201ENST00000530758 RRP7BPQ9NSQ0 103 aa24.33■■□□□ 1.49
BRK1-201ENST00000530758 FER1L4A9Z1Z3 1794 aa24.32■■□□□ 1.48
BRK1-201ENST00000530758 ITGAEP38570 1179 aa24.32■■□□□ 1.48
BRK1-201ENST00000530758 EIF2AK4Q9P2K8 1649 aaKnown RBP24.3■■□□□ 1.48
BRK1-201ENST00000530758 ERBINQ96RT1 1412 aa24.29■■□□□ 1.48
BRK1-201ENST00000530758 MLECQ14165 292 aa24.29■■□□□ 1.48
BRK1-201ENST00000530758 PPP6R1Q9UPN7 881 aa24.24■■□□□ 1.47
BRK1-201ENST00000530758 ANKRD50Q9ULJ7 1429 aa24.23■■□□□ 1.47
BRK1-201ENST00000530758 RNF17Q9BXT8 1623 aaKnown RBP24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms