RNA–Protein interactions for RNA: ENST00000529689.5

CCDC90B-214, Transcript of coiled-coil domain containing 90B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC90B, Length 4,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-214ENST00000529689 ROCK2O75116 1388 aaKnown RBP12.98□□□□□ -0.33
CCDC90B-214ENST00000529689 SAFB2Q14151 953 aaKnown RBP eCLIP12.97□□□□□ -0.33
CCDC90B-214ENST00000529689 C11orf95C9JLR9 678 aaPredicted RBP12.97□□□□□ -0.33
CCDC90B-214ENST00000529689 SLC4A3P48751 1232 aa12.97□□□□□ -0.33
CCDC90B-214ENST00000529689 TMF1P82094 1093 aa12.97□□□□□ -0.33
CCDC90B-214ENST00000529689 CCDC146Q8IYE0 955 aa12.96□□□□□ -0.33
CCDC90B-214ENST00000529689 DNAJC5BQ9UF47 199 aa12.95□□□□□ -0.34
CCDC90B-214ENST00000529689 UACAQ9BZF9 1416 aa12.95□□□□□ -0.34
CCDC90B-214ENST00000529689 ZBED9Q6R2W3 1325 aa12.95□□□□□ -0.34
CCDC90B-214ENST00000529689 NCAPD3P42695 1498 aa12.95□□□□□ -0.34
CCDC90B-214ENST00000529689 CCDC7Q96M83 1385 aa12.95□□□□□ -0.34
CCDC90B-214ENST00000529689 ERICH6BQ5W0A0 696 aa12.94□□□□□ -0.34
CCDC90B-214ENST00000529689 SPRYD3Q8NCJ5 442 aa12.94□□□□□ -0.34
CCDC90B-214ENST00000529689 USP47Q96K76 1375 aa12.94□□□□□ -0.34
CCDC90B-214ENST00000529689 PDS5BQ9NTI5 1447 aa12.94□□□□□ -0.34
CCDC90B-214ENST00000529689 TOP2BQ02880 1626 aa12.93□□□□□ -0.34
CCDC90B-214ENST00000529689 JPH4Q96JJ6 628 aa12.93□□□□□ -0.34
CCDC90B-214ENST00000529689 CFTRP13569 1480 aa12.93□□□□□ -0.34
CCDC90B-214ENST00000529689 ERICH3Q5RHP9 1530 aa12.93□□□□□ -0.34
CCDC90B-214ENST00000529689 NPM1P06748 294 aaKnown RBP eCLIP12.93□□□□□ -0.34
CCDC90B-214ENST00000529689 NESP48681 1621 aa12.93□□□□□ -0.34
CCDC90B-214ENST00000529689 IPO9Q96P70 1041 aaKnown RBP12.93□□□□□ -0.34
CCDC90B-214ENST00000529689 KTN1Q86UP2 1357 aaKnown RBP12.93□□□□□ -0.34
CCDC90B-214ENST00000529689 MYOM3Q5VTT5 1437 aa12.92□□□□□ -0.34
CCDC90B-214ENST00000529689 PANK3Q9H999 370 aa12.92□□□□□ -0.34
CCDC90B-214ENST00000529689 ANKRD30AQ9BXX3 1397 aa12.91□□□□□ -0.34
CCDC90B-214ENST00000529689 PLEKHG5O94827 1062 aa12.91□□□□□ -0.34
CCDC90B-214ENST00000529689 NLRP13Q86W25 1043 aa12.91□□□□□ -0.34
CCDC90B-214ENST00000529689 DDRGK1Q96HY6 314 aa12.91□□□□□ -0.34
CCDC90B-214ENST00000529689 ERCC6Q03468 1493 aa12.91□□□□□ -0.34
CCDC90B-214ENST00000529689 NCOA2Q15596 1464 aa12.91□□□□□ -0.34
CCDC90B-214ENST00000529689 U2SURPO15042 1029 aaKnown RBP12.9□□□□□ -0.34
CCDC90B-214ENST00000529689 CDCA7LQ96GN5 454 aa12.9□□□□□ -0.34
CCDC90B-214ENST00000529689 MSH5O43196 834 aa12.9□□□□□ -0.35
CCDC90B-214ENST00000529689 RALBP1Q15311 655 aa12.9□□□□□ -0.35
CCDC90B-214ENST00000529689 PAK3O75914 559 aaPredicted RBP12.89□□□□□ -0.35
CCDC90B-214ENST00000529689 AQRO60306 1485 aaKnown RBP eCLIP12.89□□□□□ -0.35
CCDC90B-214ENST00000529689 CLUAP1Q96AJ1 413 aa12.88□□□□□ -0.35
CCDC90B-214ENST00000529689 BICRAQ9NZM4 1560 aa12.88□□□□□ -0.35
CCDC90B-214ENST00000529689 GAPVD1Q14C86 1478 aa12.88□□□□□ -0.35
CCDC90B-214ENST00000529689 CDCA8Q53HL2 280 aa12.88□□□□□ -0.35
CCDC90B-214ENST00000529689 NUTM2DQ5VT03 806 aaPredicted RBP12.88□□□□□ -0.35
CCDC90B-214ENST00000529689 CASKIN1Q8WXD9 1431 aa12.88□□□□□ -0.35
CCDC90B-214ENST00000529689 AKNAQ7Z591 1439 aa12.87□□□□□ -0.35
CCDC90B-214ENST00000529689 FANCIQ9NVI1 1328 aa12.87□□□□□ -0.35
CCDC90B-214ENST00000529689 PDE4AP27815 886 aa12.87□□□□□ -0.35
CCDC90B-214ENST00000529689 SLKQ9H2G2 1235 aaPredicted RBP12.86□□□□□ -0.35
CCDC90B-214ENST00000529689 TIAM1Q13009 1591 aa12.86□□□□□ -0.35
CCDC90B-214ENST00000529689 GGT6Q6P531 493 aa12.86□□□□□ -0.35
CCDC90B-214ENST00000529689 FTSJ3Q8IY81 847 aaKnown RBP12.86□□□□□ -0.35
CCDC90B-214ENST00000529689 CRBNQ96SW2 442 aa12.86□□□□□ -0.35
CCDC90B-214ENST00000529689 RRP7AQ9Y3A4 280 aaKnown RBP12.86□□□□□ -0.35
CCDC90B-214ENST00000529689 RRP1P56182 461 aaKnown RBP12.86□□□□□ -0.35
CCDC90B-214ENST00000529689 TCERG1O14776 1098 aaKnown RBP12.85□□□□□ -0.35
CCDC90B-214ENST00000529689 CNTLNQ9NXG0 1405 aa12.85□□□□□ -0.35
CCDC90B-214ENST00000529689 SKAP1Q86WV1 359 aa12.85□□□□□ -0.35
CCDC90B-214ENST00000529689 MYBBP1AQ9BQG0 1328 aaKnown RBP12.85□□□□□ -0.35
CCDC90B-214ENST00000529689 BCL2L13Q9BXK5 485 aa12.85□□□□□ -0.35
CCDC90B-214ENST00000529689 STK26Q9P289 416 aa12.85□□□□□ -0.35
CCDC90B-214ENST00000529689 NBPF1Q3BBV0 1214 aa12.84□□□□□ -0.35
CCDC90B-214ENST00000529689 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.84□□□□□ -0.35
CCDC90B-214ENST00000529689 MORC1Q86VD1 984 aa12.83□□□□□ -0.36
CCDC90B-214ENST00000529689 NAIPQ13075 1403 aa12.83□□□□□ -0.36
CCDC90B-214ENST00000529689 BECN1Q14457 450 aa12.82□□□□□ -0.36
CCDC90B-214ENST00000529689 CFAP53Q96M91 514 aa12.82□□□□□ -0.36
CCDC90B-214ENST00000529689 KIF15Q9NS87 1388 aa12.82□□□□□ -0.36
CCDC90B-214ENST00000529689 KIF3BO15066 747 aa12.81□□□□□ -0.36
CCDC90B-214ENST00000529689 GOLGA2Q08379 1002 aa12.81□□□□□ -0.36
CCDC90B-214ENST00000529689 HFM1A2PYH4 1435 aa12.8□□□□□ -0.36
CCDC90B-214ENST00000529689 UNC13AQ9UPW8 1703 aa12.8□□□□□ -0.36
CCDC90B-214ENST00000529689 APAF1O14727 1248 aa12.8□□□□□ -0.36
CCDC90B-214ENST00000529689 TPRNQ4KMQ1 711 aa12.8□□□□□ -0.36
CCDC90B-214ENST00000529689 CARMIL2Q6F5E8 1435 aa12.8□□□□□ -0.36
CCDC90B-214ENST00000529689 ESF1Q9H501 851 aaKnown RBP12.79□□□□□ -0.36
CCDC90B-214ENST00000529689 U2AF1L5P0DN76 240 aaPredicted RBP12.79□□□□□ -0.36
CCDC90B-214ENST00000529689 U2AF1Q01081 240 aaKnown RBP eCLIP12.79□□□□□ -0.36
CCDC90B-214ENST00000529689 POLA1P09884 1462 aaPredicted RBP12.79□□□□□ -0.36
CCDC90B-214ENST00000529689 GZF1Q9H116 711 aaPredicted RBP12.78□□□□□ -0.36
CCDC90B-214ENST00000529689 SOX12O15370 315 aa12.78□□□□□ -0.36
CCDC90B-214ENST00000529689 TRAK1Q9UPV9 953 aa12.78□□□□□ -0.36
CCDC90B-214ENST00000529689 FYCO1Q9BQS8 1478 aa12.78□□□□□ -0.36
CCDC90B-214ENST00000529689 PNISRQ8TF01 805 aaKnown RBP12.78□□□□□ -0.36
CCDC90B-214ENST00000529689 SRPK2P78362 688 aaKnown RBP12.77□□□□□ -0.36
CCDC90B-214ENST00000529689 POGKQ9P215 609 aa12.77□□□□□ -0.37
CCDC90B-214ENST00000529689 MAPKBP1O60336 1514 aa12.77□□□□□ -0.37
CCDC90B-214ENST00000529689 MAPK8IP3Q9UPT6 1336 aa12.76□□□□□ -0.37
CCDC90B-214ENST00000529689 PTPRKQ15262 1439 aa12.76□□□□□ -0.37
CCDC90B-214ENST00000529689 ADAMTS8Q9UP79 889 aa12.76□□□□□ -0.37
CCDC90B-214ENST00000529689 CCDC144AA2RUR9 1427 aa12.76□□□□□ -0.37
CCDC90B-214ENST00000529689 EFCAB2Q5VUJ9 269 aa12.76□□□□□ -0.37
CCDC90B-214ENST00000529689 COG6Q9Y2V7 657 aa12.75□□□□□ -0.37
CCDC90B-214ENST00000529689 PCF11O94913 1555 aaKnown RBP12.75□□□□□ -0.37
CCDC90B-214ENST00000529689 PDE3BQ13370 1112 aa12.75□□□□□ -0.37
CCDC90B-214ENST00000529689 NCLP19338 710 aaKnown RBP12.74□□□□□ -0.37
CCDC90B-214ENST00000529689 PRG4Q92954 1404 aaPredicted RBP12.74□□□□□ -0.37
CCDC90B-214ENST00000529689 ANKRD50Q9ULJ7 1429 aa12.73□□□□□ -0.37
CCDC90B-214ENST00000529689 TOPBP1Q92547 1522 aa12.73□□□□□ -0.37
CCDC90B-214ENST00000529689 APBB1O00213 710 aa12.73□□□□□ -0.37
CCDC90B-214ENST00000529689 MLECQ14165 292 aa12.72□□□□□ -0.37
CCDC90B-214ENST00000529689 ANP32BQ92688 251 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms