RNA–Protein interactions for RNA: ENST00000528235.5

CHKA-204, Transcript of choline kinase alpha, humanhuman

TSL 5

Gene CHKA, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-204ENST00000528235 ERCC6L2Q5T890 1561 aa10.09□□□□□ -0.79
CHKA-204ENST00000528235 OTUD5Q96G74 571 aa10.09□□□□□ -0.79
CHKA-204ENST00000528235 TRPC6Q9Y210 931 aa10.09□□□□□ -0.79
CHKA-204ENST00000528235 TSPOAP1O95153 1857 aa10.08□□□□□ -0.8
CHKA-204ENST00000528235 CEP170Q5SW79 1584 aa10.07□□□□□ -0.8
CHKA-204ENST00000528235 TTLL13PA6NNM8 815 aa10.07□□□□□ -0.8
CHKA-204ENST00000528235 MAMSTRQ6ZN01 415 aa10.07□□□□□ -0.8
CHKA-204ENST00000528235 CUX1P39880 1505 aa10.06□□□□□ -0.8
CHKA-204ENST00000528235 IFNL1Q8IU54 200 aa10.05□□□□□ -0.8
CHKA-204ENST00000528235 ABCA5Q8WWZ7 1642 aa10.04□□□□□ -0.8
CHKA-204ENST00000528235 GSE1Q14687 1217 aa10.04□□□□□ -0.8
CHKA-204ENST00000528235 KDM6BO15054 1643 aa10.04□□□□□ -0.8
CHKA-204ENST00000528235 SEC24BO95487 1268 aa10.03□□□□□ -0.8
CHKA-204ENST00000528235 SHROOM2Q13796 1616 aa10.03□□□□□ -0.8
CHKA-204ENST00000528235 GRIN2AQ12879 1464 aa10.03□□□□□ -0.8
CHKA-204ENST00000528235 PYGBP11216 843 aa10.02□□□□□ -0.81
CHKA-204ENST00000528235 TRIM35Q9UPQ4 493 aa10.02□□□□□ -0.81
CHKA-204ENST00000528235 FAM69CQ0P6D2 419 aa10.01□□□□□ -0.81
CHKA-204ENST00000528235 IER5LQ5T953 404 aa10.01□□□□□ -0.81
CHKA-204ENST00000528235 KDM4FA0A1W2PPD8 638 aa10□□□□□ -0.81
CHKA-204ENST00000528235 TMEM106CQ9BVX2 250 aa10□□□□□ -0.81
CHKA-204ENST00000528235 SCUBE2Q9NQ36 999 aa10□□□□□ -0.81
CHKA-204ENST00000528235 ADAMTS12P58397 1594 aa10□□□□□ -0.81
CHKA-204ENST00000528235 ABCA10Q8WWZ4 1543 aa9.99□□□□□ -0.81
CHKA-204ENST00000528235 ABCC10Q5T3U5 1492 aa9.98□□□□□ -0.81
CHKA-204ENST00000528235 DIP2BQ9P265 1576 aa9.97□□□□□ -0.81
CHKA-204ENST00000528235 NUP160Q12769 1436 aa9.97□□□□□ -0.81
CHKA-204ENST00000528235 POTEJP0CG39 1038 aa9.96□□□□□ -0.82
CHKA-204ENST00000528235 POTEFA5A3E0 1075 aa9.95□□□□□ -0.82
CHKA-204ENST00000528235 MAPKBP1O60336 1514 aa9.94□□□□□ -0.82
CHKA-204ENST00000528235 PRG4Q92954 1404 aaPredicted RBP9.94□□□□□ -0.82
CHKA-204ENST00000528235 SPOCK2Q92563 424 aa9.94□□□□□ -0.82
CHKA-204ENST00000528235 ZNF467Q7Z7K2 595 aaPredicted RBP9.93□□□□□ -0.82
CHKA-204ENST00000528235 COLQQ9Y215 455 aaPredicted RBP9.93□□□□□ -0.82
CHKA-204ENST00000528235 FHAD1B1AJZ9 1412 aa9.92□□□□□ -0.82
CHKA-204ENST00000528235 IFNLR1Q8IU57 520 aaPredicted RBP9.92□□□□□ -0.82
CHKA-204ENST00000528235 PCDHB8Q9UN66 801 aa9.92□□□□□ -0.82
CHKA-204ENST00000528235 CHRM1P11229 460 aaPredicted RBP9.91□□□□□ -0.82
CHKA-204ENST00000528235 JPH4Q96JJ6 628 aa9.91□□□□□ -0.82
CHKA-204ENST00000528235 ADCY10Q96PN6 1610 aa9.91□□□□□ -0.82
CHKA-204ENST00000528235 PLCG2P16885 1265 aa9.9□□□□□ -0.82
CHKA-204ENST00000528235 WRNQ14191 1432 aaPredicted RBP eCLIP9.89□□□□□ -0.83
CHKA-204ENST00000528235 ERICH3Q5RHP9 1530 aa9.88□□□□□ -0.83
CHKA-204ENST00000528235 HECW2Q9P2P5 1572 aa9.88□□□□□ -0.83
CHKA-204ENST00000528235 ADGRL1O94910 1474 aa9.87□□□□□ -0.83
CHKA-204ENST00000528235 BIVM-ERCC5R4GMW8 1640 aa9.87□□□□□ -0.83
CHKA-204ENST00000528235 CIZ1Q9ULV3 898 aaPredicted RBP9.87□□□□□ -0.83
CHKA-204ENST00000528235 RUSC2Q8N2Y8 1516 aa9.86□□□□□ -0.83
CHKA-204ENST00000528235 IRX5P78411 483 aaPredicted RBP9.85□□□□□ -0.83
CHKA-204ENST00000528235 GOLGA2Q08379 1002 aa9.85□□□□□ -0.83
CHKA-204ENST00000528235 OCEL1Q9H607 264 aa9.85□□□□□ -0.83
CHKA-204ENST00000528235 TOP2BQ02880 1626 aa9.84□□□□□ -0.83
CHKA-204ENST00000528235 PPRC1Q5VV67 1664 aaKnown RBP9.83□□□□□ -0.84
CHKA-204ENST00000528235 POTEMA6NI47 508 aa9.82□□□□□ -0.84
CHKA-204ENST00000528235 CUL7Q14999 1698 aa9.82□□□□□ -0.84
CHKA-204ENST00000528235 PSEN1P49768 467 aa9.81□□□□□ -0.84
CHKA-204ENST00000528235 MKRN3Q13064 507 aaKnown RBP9.81□□□□□ -0.84
CHKA-204ENST00000528235 POTEGQ6S5H5 508 aa9.8□□□□□ -0.84
CHKA-204ENST00000528235 PDAP1Q13442 181 aaKnown RBP9.79□□□□□ -0.84
CHKA-204ENST00000528235 FAM163AQ96GL9 167 aaPredicted RBP9.79□□□□□ -0.84
CHKA-204ENST00000528235 TTBK1Q5TCY1 1321 aaPredicted RBP9.79□□□□□ -0.84
CHKA-204ENST00000528235 FBXO41Q8TF61 875 aa9.78□□□□□ -0.84
CHKA-204ENST00000528235 GLI2P10070 1586 aa9.77□□□□□ -0.85
CHKA-204ENST00000528235 SLAIN1Q8ND83 568 aa9.77□□□□□ -0.85
CHKA-204ENST00000528235 PLB1Q6P1J6 1458 aa9.75□□□□□ -0.85
CHKA-204ENST00000528235 KIAA0586Q9BVV6 1533 aa9.75□□□□□ -0.85
CHKA-204ENST00000528235 MAP3K4Q9Y6R4 1608 aa9.74□□□□□ -0.85
CHKA-204ENST00000528235 PTPRGP23470 1445 aa9.74□□□□□ -0.85
CHKA-204ENST00000528235 PCDH10Q9P2E7 1040 aa9.74□□□□□ -0.85
CHKA-204ENST00000528235 ASXL2Q76L83 1435 aa9.73□□□□□ -0.85
CHKA-204ENST00000528235 TEX14Q8IWB6 1497 aa9.73□□□□□ -0.85
CHKA-204ENST00000528235 ABCC2Q92887 1545 aa9.73□□□□□ -0.85
CHKA-204ENST00000528235 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.73□□□□□ -0.85
CHKA-204ENST00000528235 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.72□□□□□ -0.854e-12■□□□□ 10.4
CHKA-204ENST00000528235 L3MBTL3Q96JM7 780 aaPredicted RBP9.71□□□□□ -0.86
CHKA-204ENST00000528235 CARMIL2Q6F5E8 1435 aa9.71□□□□□ -0.86
CHKA-204ENST00000528235 COL17A1Q9UMD9 1497 aaPredicted RBP9.71□□□□□ -0.86
CHKA-204ENST00000528235 PLSCR2Q9NRY7 297 aa9.7□□□□□ -0.86
CHKA-204ENST00000528235 LCE2DQ5TA82 110 aaPredicted RBP9.69□□□□□ -0.86
CHKA-204ENST00000528235 PDCD7Q8N8D1 485 aaKnown RBP9.69□□□□□ -0.86
CHKA-204ENST00000528235 TNIKQ9UKE5 1360 aa9.69□□□□□ -0.86
CHKA-204ENST00000528235 KIF21BO75037 1637 aa9.68□□□□□ -0.86
CHKA-204ENST00000528235 ZCCHC11Q5TAX3 1644 aaKnown RBP9.68□□□□□ -0.86
CHKA-204ENST00000528235 C3orf67Q6ZVT6 689 aa9.68□□□□□ -0.86
CHKA-204ENST00000528235 CABP2Q9NPB3 220 aa9.68□□□□□ -0.86
CHKA-204ENST00000528235 EPRSP07814 1512 aaKnown RBP9.67□□□□□ -0.86
CHKA-204ENST00000528235 UHRF1BP1LA0JNW5 1464 aa9.66□□□□□ -0.86
CHKA-204ENST00000528235 SNPHO15079 494 aa9.66□□□□□ -0.86
CHKA-204ENST00000528235 UACAQ9BZF9 1416 aa9.65□□□□□ -0.86
CHKA-204ENST00000528235 CFAP43Q8NDM7 1665 aa9.65□□□□□ -0.86
CHKA-204ENST00000528235 SUPT5HO00267 1087 aaKnown RBP9.65□□□□□ -0.86
CHKA-204ENST00000528235 IQGAP2Q13576 1575 aa9.65□□□□□ -0.86
CHKA-204ENST00000528235 LMTK3Q96Q04 1460 aa9.65□□□□□ -0.87
CHKA-204ENST00000528235 G3V3G9 751 aa9.64□□□□□ -0.87
CHKA-204ENST00000528235 KDM5BQ9UGL1 1544 aa9.62□□□□□ -0.87
CHKA-204ENST00000528235 KIF27Q86VH2 1401 aa9.62□□□□□ -0.87
CHKA-204ENST00000528235 IGF1RP08069 1367 aa9.62□□□□□ -0.87
CHKA-204ENST00000528235 RIOK3O14730 519 aaKnown RBP9.61□□□□□ -0.87
CHKA-204ENST00000528235 ST18O60284 1047 aa9.61□□□□□ -0.87
CHKA-204ENST00000528235 TMEM121BQ9BXQ6 578 aaPredicted RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms