RNA–Protein interactions for RNA: ENST00000527906.5

PSMC3-204, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

TSL 3

Gene PSMC3, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-204ENST00000527906 FYCO1Q9BQS8 1478 aa17.25■□□□□ 0.35
PSMC3-204ENST00000527906 RICTORQ6R327 1708 aa17.25■□□□□ 0.35
PSMC3-204ENST00000527906 SIGLEC1Q9BZZ2 1709 aa17.25■□□□□ 0.35
PSMC3-204ENST00000527906 CASKIN1Q8WXD9 1431 aa17.25■□□□□ 0.35
PSMC3-204ENST00000527906 ZFYVE16Q7Z3T8 1539 aa17.23■□□□□ 0.35
PSMC3-204ENST00000527906 RAPGEF6Q8TEU7 1601 aa17.23■□□□□ 0.35
PSMC3-204ENST00000527906 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.23■□□□□ 0.35
PSMC3-204ENST00000527906 HNRNPUL2Q1KMD3 747 aaKnown RBP17.23■□□□□ 0.35
PSMC3-204ENST00000527906 HECW1Q76N89 1606 aa17.22■□□□□ 0.35
PSMC3-204ENST00000527906 FER1L4A9Z1Z3 1794 aa17.22■□□□□ 0.35
PSMC3-204ENST00000527906 ZMYM4Q5VZL5 1548 aa17.21■□□□□ 0.35
PSMC3-204ENST00000527906 PREX1Q8TCU6 1659 aa17.21■□□□□ 0.35
PSMC3-204ENST00000527906 STRCQ7RTU9 1775 aa17.2■□□□□ 0.34
PSMC3-204ENST00000527906 MAGI2Q86UL8 1455 aa17.18■□□□□ 0.34
PSMC3-204ENST00000527906 CEBPAP49715 358 aaPredicted RBP17.18■□□□□ 0.34
PSMC3-204ENST00000527906 ARHGEF12Q9NZN5 1544 aa17.17■□□□□ 0.34
PSMC3-204ENST00000527906 NUP153P49790 1475 aaKnown RBP17.17■□□□□ 0.34
PSMC3-204ENST00000527906 PTPRTO14522 1441 aa17.16■□□□□ 0.34
PSMC3-204ENST00000527906 UHRF1BP1Q6BDS2 1440 aa17.16■□□□□ 0.34
PSMC3-204ENST00000527906 CCDC18Q5T9S5 1454 aa17.16■□□□□ 0.34
PSMC3-204ENST00000527906 MAP3K1Q13233 1512 aa17.16■□□□□ 0.34
PSMC3-204ENST00000527906 CFAP74Q9C0B2 1584 aa17.15■□□□□ 0.34
PSMC3-204ENST00000527906 LTBP4Q8N2S1 1624 aa17.14■□□□□ 0.33
PSMC3-204ENST00000527906 IQSEC2Q5JU85 1478 aa17.13■□□□□ 0.33
PSMC3-204ENST00000527906 LRRIQ1Q96JM4 1722 aa17.1■□□□□ 0.33
PSMC3-204ENST00000527906 PLEKHD1A6NEE1 506 aa17.1■□□□□ 0.33
PSMC3-204ENST00000527906 C9orf84Q5VXU9 1444 aa17.1■□□□□ 0.33
PSMC3-204ENST00000527906 ATP10AO60312 1499 aa17.1■□□□□ 0.33
PSMC3-204ENST00000527906 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.1■□□□□ 0.332e-6■□□□□ 8.3
PSMC3-204ENST00000527906 TIAM1Q13009 1591 aa17.09■□□□□ 0.33
PSMC3-204ENST00000527906 SCAPERQ9BY12 1400 aa17.07■□□□□ 0.32
PSMC3-204ENST00000527906 CDK13Q14004 1512 aaKnown RBP17.05■□□□□ 0.32
PSMC3-204ENST00000527906 SETD1BQ9UPS6 1966 aaKnown RBP17.04■□□□□ 0.32
PSMC3-204ENST00000527906 APLP2Q06481 763 aa17.03■□□□□ 0.32
PSMC3-204ENST00000527906 UBAP1LF5GYI3 381 aa17.02■□□□□ 0.32
PSMC3-204ENST00000527906 ATP1B4Q9UN42 357 aaPredicted RBP17.01■□□□□ 0.31
PSMC3-204ENST00000527906 CDK11AQ9UQ88 783 aaPredicted RBP17.01■□□□□ 0.31
PSMC3-204ENST00000527906 NCOA1Q15788 1441 aa17.01■□□□□ 0.31
PSMC3-204ENST00000527906 EHBP1L1Q8N3D4 1523 aa17■□□□□ 0.31
PSMC3-204ENST00000527906 LRRC9Q6ZRR7 1453 aa16.99■□□□□ 0.31
PSMC3-204ENST00000527906 PLCH2O75038 1416 aa16.99■□□□□ 0.31
PSMC3-204ENST00000527906 TROQ12816 1431 aaPredicted RBP16.97■□□□□ 0.31
PSMC3-204ENST00000527906 TRAPPC8Q9Y2L5 1435 aa16.96■□□□□ 0.31
PSMC3-204ENST00000527906 ZNF335Q9H4Z2 1342 aaPredicted RBP16.96■□□□□ 0.3
PSMC3-204ENST00000527906 MTUS2Q5JR59 1369 aa16.95■□□□□ 0.3
PSMC3-204ENST00000527906 C3P01024 1663 aa16.94■□□□□ 0.3
PSMC3-204ENST00000527906 EFCAB2Q5VUJ9 269 aa16.93■□□□□ 0.3
PSMC3-204ENST00000527906 MED1Q15648 1581 aaPredicted RBP16.93■□□□□ 0.3
PSMC3-204ENST00000527906 ESF1Q9H501 851 aaKnown RBP16.92■□□□□ 0.3
PSMC3-204ENST00000527906 ZNF518AQ6AHZ1 1483 aa16.92■□□□□ 0.3
PSMC3-204ENST00000527906 KIF14Q15058 1648 aa16.92■□□□□ 0.3
PSMC3-204ENST00000527906 SUPT6HQ7KZ85 1726 aaKnown RBP16.91■□□□□ 0.3
PSMC3-204ENST00000527906 AFAP1Q8N556 730 aa16.91■□□□□ 0.3
PSMC3-204ENST00000527906 CAMSAP1Q5T5Y3 1602 aa16.91■□□□□ 0.3
PSMC3-204ENST00000527906 MYT1LQ9UL68 1186 aa16.9■□□□□ 0.3
PSMC3-204ENST00000527906 KDM5CP41229 1560 aa16.89■□□□□ 0.3
PSMC3-204ENST00000527906 DIP2CQ9Y2E4 1556 aa16.89■□□□□ 0.3
PSMC3-204ENST00000527906 HSPA1LP34931 641 aa16.89■□□□□ 0.29
PSMC3-204ENST00000527906 NCKAP5LQ9HCH0 1330 aa16.89■□□□□ 0.29
PSMC3-204ENST00000527906 REREQ9P2R6 1566 aa16.89■□□□□ 0.29
PSMC3-204ENST00000527906 KANK4Q5T7N3 995 aaPredicted RBP16.88■□□□□ 0.29
PSMC3-204ENST00000527906 AGLP35573 1532 aa16.86■□□□□ 0.29
PSMC3-204ENST00000527906 NCOA2Q15596 1464 aa16.86■□□□□ 0.29
PSMC3-204ENST00000527906 CNTLNQ9NXG0 1405 aa16.85■□□□□ 0.29
PSMC3-204ENST00000527906 SCAF1Q9H7N4 1312 aaKnown RBP16.84■□□□□ 0.29
PSMC3-204ENST00000527906 NPATQ14207 1427 aa16.83■□□□□ 0.28
PSMC3-204ENST00000527906 ABCA6Q8N139 1617 aa16.83■□□□□ 0.28
PSMC3-204ENST00000527906 PHF23Q9BUL5 403 aaPredicted RBP16.83■□□□□ 0.28
PSMC3-204ENST00000527906 MYO5CQ9NQX4 1742 aa16.83■□□□□ 0.28
PSMC3-204ENST00000527906 MLH3Q9UHC1 1453 aa16.82■□□□□ 0.28
PSMC3-204ENST00000527906 PIP4K2BP78356 416 aa16.82■□□□□ 0.28
PSMC3-204ENST00000527906 PKD2Q13563 968 aa16.82■□□□□ 0.28
PSMC3-204ENST00000527906 ITSN2Q9NZM3 1697 aa16.81■□□□□ 0.28
PSMC3-204ENST00000527906 ARHGAP5Q13017 1502 aa16.8■□□□□ 0.28
PSMC3-204ENST00000527906 PLA2R1Q13018 1463 aa16.8■□□□□ 0.28
PSMC3-204ENST00000527906 MYOM3Q5VTT5 1437 aa16.79■□□□□ 0.28
PSMC3-204ENST00000527906 PREX2Q70Z35 1606 aa16.78■□□□□ 0.28
PSMC3-204ENST00000527906 TCOF1Q13428 1488 aaKnown RBP16.78■□□□□ 0.28
PSMC3-204ENST00000527906 CCNB3Q8WWL7 1395 aa16.77■□□□□ 0.28
PSMC3-204ENST00000527906 CDC42BPAQ5VT25 1732 aa16.77■□□□□ 0.28
PSMC3-204ENST00000527906 TOM1O60784 492 aa16.77■□□□□ 0.28
PSMC3-204ENST00000527906 PPP6R1Q9UPN7 881 aa16.77■□□□□ 0.28
PSMC3-204ENST00000527906 ZMYM3Q14202 1370 aa16.77■□□□□ 0.27
PSMC3-204ENST00000527906 GPATCH8Q9UKJ3 1502 aaKnown RBP16.76■□□□□ 0.27
PSMC3-204ENST00000527906 MIA2Q96PC5 1412 aa16.76■□□□□ 0.27
PSMC3-204ENST00000527906 MROH2AA6NES4 1674 aa16.73■□□□□ 0.27
PSMC3-204ENST00000527906 ZNF142P52746 1687 aaPredicted RBP16.72■□□□□ 0.27
PSMC3-204ENST00000527906 FGD6Q6ZV73 1430 aa16.72■□□□□ 0.27
PSMC3-204ENST00000527906 MYO3AQ8NEV4 1616 aa16.72■□□□□ 0.27
PSMC3-204ENST00000527906 CDC42BPBQ9Y5S2 1711 aa16.72■□□□□ 0.27
PSMC3-204ENST00000527906 CEP170BQ9Y4F5 1589 aaPredicted RBP16.72■□□□□ 0.27
PSMC3-204ENST00000527906 RRBP1Q9P2E9 1410 aaKnown RBP16.71■□□□□ 0.27
PSMC3-204ENST00000527906 PPARGC1BQ86YN6 1023 aaKnown RBP16.71■□□□□ 0.27
PSMC3-204ENST00000527906 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.7■□□□□ 0.26
PSMC3-204ENST00000527906 ABCC1P33527 1531 aa16.7■□□□□ 0.26
PSMC3-204ENST00000527906 CPS1P31327 1500 aa16.69■□□□□ 0.26
PSMC3-204ENST00000527906 KIDINS220Q9ULH0 1771 aa16.69■□□□□ 0.26
PSMC3-204ENST00000527906 PTPRKQ15262 1439 aa16.68■□□□□ 0.26
PSMC3-204ENST00000527906 CFDP1Q9UEE9 299 aaPredicted RBP16.67■□□□□ 0.26
PSMC3-204ENST00000527906 PLEKHH2Q8IVE3 1493 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms