RNA–Protein interactions for RNA: ENST00000527875.1

FOXRED1-208, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 3

Gene FOXRED1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-208ENST00000527875 NEO1Q92859 1461 aa26.85■■□□□ 1.89
FOXRED1-208ENST00000527875 GPATCH8Q9UKJ3 1502 aaKnown RBP26.85■■□□□ 1.89
FOXRED1-208ENST00000527875 KDM6BO15054 1643 aa26.83■■□□□ 1.89
FOXRED1-208ENST00000527875 ITSN2Q9NZM3 1697 aa26.83■■□□□ 1.89
FOXRED1-208ENST00000527875 EFCAB2Q5VUJ9 269 aa26.8■■□□□ 1.88
FOXRED1-208ENST00000527875 PHLDB1Q86UU1 1377 aa26.79■■□□□ 1.88
FOXRED1-208ENST00000527875 AKNAQ7Z591 1439 aa26.79■■□□□ 1.88
FOXRED1-208ENST00000527875 COL17A1Q9UMD9 1497 aaPredicted RBP26.76■■□□□ 1.87
FOXRED1-208ENST00000527875 PPARGC1BQ86YN6 1023 aaKnown RBP26.74■■□□□ 1.87
FOXRED1-208ENST00000527875 CFDP1Q9UEE9 299 aaPredicted RBP26.74■■□□□ 1.87
FOXRED1-208ENST00000527875 ADGRL1O94910 1474 aa26.73■■□□□ 1.87
FOXRED1-208ENST00000527875 SAMD9LQ8IVG5 1584 aa26.71■■□□□ 1.87
FOXRED1-208ENST00000527875 ZNF777Q9ULD5 760 aaPredicted RBP26.71■■□□□ 1.87
FOXRED1-208ENST00000527875 MYOM3Q5VTT5 1437 aa26.69■■□□□ 1.86
FOXRED1-208ENST00000527875 SCAPERQ9BY12 1400 aa26.68■■□□□ 1.86
FOXRED1-208ENST00000527875 ABCC1P33527 1531 aa26.68■■□□□ 1.86
FOXRED1-208ENST00000527875 RICTORQ6R327 1708 aa26.67■■□□□ 1.86
FOXRED1-208ENST00000527875 DENND4BO75064 1496 aaPredicted RBP26.67■■□□□ 1.86
FOXRED1-208ENST00000527875 FRMPD1Q5SYB0 1578 aa26.65■■□□□ 1.86
FOXRED1-208ENST00000527875 RAPGEF3O95398 923 aa26.64■■□□□ 1.86
FOXRED1-208ENST00000527875 ARHGEF12Q9NZN5 1544 aa26.63■■□□□ 1.85
FOXRED1-208ENST00000527875 ZNF644Q9H582 1327 aaPredicted RBP26.63■■□□□ 1.85
FOXRED1-208ENST00000527875 SYCP2Q9BX26 1530 aa26.62■■□□□ 1.85
FOXRED1-208ENST00000527875 MIA2Q96PC5 1412 aa26.62■■□□□ 1.85
FOXRED1-208ENST00000527875 CAMSAP2Q08AD1 1489 aa26.62■■□□□ 1.85
FOXRED1-208ENST00000527875 PLEKHH2Q8IVE3 1493 aa26.62■■□□□ 1.85
FOXRED1-208ENST00000527875 POGZQ7Z3K3 1410 aa26.61■■□□□ 1.85
FOXRED1-208ENST00000527875 KIAA1107Q9UPP5 1409 aa26.58■■□□□ 1.85
FOXRED1-208ENST00000527875 PTPN23Q9H3S7 1636 aa26.57■■□□□ 1.84
FOXRED1-208ENST00000527875 FGD6Q6ZV73 1430 aa26.57■■□□□ 1.84
FOXRED1-208ENST00000527875 TRAPPC8Q9Y2L5 1435 aa26.56■■□□□ 1.84
FOXRED1-208ENST00000527875 HNRNPMP52272 730 aaKnown RBP eCLIP26.56■■□□□ 1.84
FOXRED1-208ENST00000527875 ZNF518AQ6AHZ1 1483 aa26.55■■□□□ 1.84
FOXRED1-208ENST00000527875 ZMYM4Q5VZL5 1548 aa26.54■■□□□ 1.84
FOXRED1-208ENST00000527875 AFAP1Q8N556 730 aa26.53■■□□□ 1.84
FOXRED1-208ENST00000527875 KDM5CP41229 1560 aa26.53■■□□□ 1.84
FOXRED1-208ENST00000527875 MBD5Q9P267 1494 aa26.52■■□□□ 1.84
FOXRED1-208ENST00000527875 TCOF1Q13428 1488 aaKnown RBP26.49■■□□□ 1.83
FOXRED1-208ENST00000527875 ARHGEF5Q12774 1597 aa26.48■■□□□ 1.83
FOXRED1-208ENST00000527875 HECW2Q9P2P5 1572 aa26.47■■□□□ 1.83
FOXRED1-208ENST00000527875 CCDC141Q6ZP82 1450 aa26.45■■□□□ 1.82
FOXRED1-208ENST00000527875 ZFYVE16Q7Z3T8 1539 aa26.44■■□□□ 1.82
FOXRED1-208ENST00000527875 MAGI2Q86UL8 1455 aa26.44■■□□□ 1.82
FOXRED1-208ENST00000527875 ARHGEF40Q8TER5 1519 aa26.44■■□□□ 1.82
FOXRED1-208ENST00000527875 KIDINS220Q9ULH0 1771 aa26.43■■□□□ 1.82
FOXRED1-208ENST00000527875 MLH3Q9UHC1 1453 aa26.42■■□□□ 1.82
FOXRED1-208ENST00000527875 YEATS2Q9ULM3 1422 aa26.42■■□□□ 1.82
FOXRED1-208ENST00000527875 FAM50AQ14320 339 aaKnown RBP26.42■■□□□ 1.82
FOXRED1-208ENST00000527875 RSPH4AQ5TD94 716 aa26.42■■□□□ 1.82
FOXRED1-208ENST00000527875 MYT1LQ9UL68 1186 aa26.42■■□□□ 1.82
FOXRED1-208ENST00000527875 INO80Q9ULG1 1556 aaPredicted RBP26.41■■□□□ 1.82
FOXRED1-208ENST00000527875 SPAG9O60271 1321 aaKnown RBP26.4■■□□□ 1.82
FOXRED1-208ENST00000527875 DNMT1P26358 1616 aaKnown RBP26.4■■□□□ 1.82
FOXRED1-208ENST00000527875 CROCC2H7BZ55 1655 aa26.39■■□□□ 1.82
FOXRED1-208ENST00000527875 ATP7AQ04656 1500 aa26.39■■□□□ 1.81
FOXRED1-208ENST00000527875 ABCA6Q8N139 1617 aa26.38■■□□□ 1.81
FOXRED1-208ENST00000527875 RRBP1Q9P2E9 1410 aaKnown RBP26.36■■□□□ 1.81
FOXRED1-208ENST00000527875 DIP2CQ9Y2E4 1556 aa26.36■■□□□ 1.81
FOXRED1-208ENST00000527875 ABCC5O15440 1437 aa26.35■■□□□ 1.81
FOXRED1-208ENST00000527875 DAPK1P53355 1430 aa26.35■■□□□ 1.81
FOXRED1-208ENST00000527875 TSPY4P0CV99 314 aa26.34■■□□□ 1.81
FOXRED1-208ENST00000527875 TSPY10P0CW01 314 aa26.34■■□□□ 1.81
FOXRED1-208ENST00000527875 MAST1Q9Y2H9 1570 aa26.33■■□□□ 1.81
FOXRED1-208ENST00000527875 RTEL1-TNFRSF6BF6WH68 1400 aa26.32■■□□□ 1.8
FOXRED1-208ENST00000527875 C9orf84Q5VXU9 1444 aa26.31■■□□□ 1.8
FOXRED1-208ENST00000527875 ATP10AO60312 1499 aa26.31■■□□□ 1.8
FOXRED1-208ENST00000527875 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.31■■□□□ 1.8
FOXRED1-208ENST00000527875 SHANK2Q9UPX8 1470 aa26.3■■□□□ 1.8
FOXRED1-208ENST00000527875 SIGLEC1Q9BZZ2 1709 aa26.29■■□□□ 1.8
FOXRED1-208ENST00000527875 ADGBQ8N7X0 1667 aa26.28■■□□□ 1.8
FOXRED1-208ENST00000527875 AEBP2Q6ZN18 517 aaPredicted RBP26.26■■□□□ 1.79
FOXRED1-208ENST00000527875 REREQ9P2R6 1566 aa26.25■■□□□ 1.79
FOXRED1-208ENST00000527875 PLXNC1O60486 1568 aa26.24■■□□□ 1.79
FOXRED1-208ENST00000527875 CHIC2Q9UKJ5 165 aa26.22■■□□□ 1.79
FOXRED1-208ENST00000527875 PTPRKQ15262 1439 aa26.22■■□□□ 1.79
FOXRED1-208ENST00000527875 ITGAEP38570 1179 aa26.21■■□□□ 1.79
FOXRED1-208ENST00000527875 A2MP01023 1474 aa26.21■■□□□ 1.79
FOXRED1-208ENST00000527875 ARID4BQ4LE39 1312 aaPredicted RBP26.2■■□□□ 1.79
FOXRED1-208ENST00000527875 ADGRL2O95490 1459 aa26.17■■□□□ 1.78
FOXRED1-208ENST00000527875 ANKRD30AQ9BXX3 1397 aa26.16■■□□□ 1.78
FOXRED1-208ENST00000527875 AGLP35573 1532 aa26.15■■□□□ 1.78
FOXRED1-208ENST00000527875 BCORL1Q5H9F3 1711 aa26.15■■□□□ 1.78
FOXRED1-208ENST00000527875 DHX29Q7Z478 1369 aaKnown RBP26.15■■□□□ 1.78
FOXRED1-208ENST00000527875 NCOA1Q15788 1441 aa26.14■■□□□ 1.78
FOXRED1-208ENST00000527875 RRP7BPQ9NSQ0 103 aa26.14■■□□□ 1.78
FOXRED1-208ENST00000527875 KIF15Q9NS87 1388 aa26.14■■□□□ 1.78
FOXRED1-208ENST00000527875 DUOX2Q9NRD8 1548 aa26.13■■□□□ 1.77
FOXRED1-208ENST00000527875 MLECQ14165 292 aa26.09■■□□□ 1.77
FOXRED1-208ENST00000527875 ROCK1Q13464 1354 aa26.08■■□□□ 1.77
FOXRED1-208ENST00000527875 ADAMTSL3P82987 1691 aa26.07■■□□□ 1.76
FOXRED1-208ENST00000527875 EIF2AK4Q9P2K8 1649 aaKnown RBP26.06■■□□□ 1.76
FOXRED1-208ENST00000527875 ERBINQ96RT1 1412 aa26.04■■□□□ 1.76
FOXRED1-208ENST00000527875 MADDQ8WXG6 1647 aa26.03■■□□□ 1.76
FOXRED1-208ENST00000527875 KDM4FA0A1W2PPD8 638 aa26.03■■□□□ 1.76
FOXRED1-208ENST00000527875 KIF3BO15066 747 aa26.03■■□□□ 1.76
FOXRED1-208ENST00000527875 FER1L4A9Z1Z3 1794 aa26.02■■□□□ 1.76
FOXRED1-208ENST00000527875 RNF17Q9BXT8 1623 aaKnown RBP25.99■■□□□ 1.75
FOXRED1-208ENST00000527875 GGT6Q6P531 493 aa25.99■■□□□ 1.75
FOXRED1-208ENST00000527875 GCC2Q8IWJ2 1684 aa25.99■■□□□ 1.75
FOXRED1-208ENST00000527875 ANKRD50Q9ULJ7 1429 aa25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms