RNA–Protein interactions for RNA: ENST00000527825.1

CHD7-205, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 434 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-205ENST00000527825 CUX1P39880 1505 aa7.47□□□□□ -1.21
CHD7-205ENST00000527825 LHX8Q68G74 356 aa7.47□□□□□ -1.21
CHD7-205ENST00000527825 FBXO3Q9UK99 471 aa7.47□□□□□ -1.21
CHD7-205ENST00000527825 CCDC61Q9Y6R9 512 aa7.45□□□□□ -1.22
CHD7-205ENST00000527825 SPATA31D1Q6ZQQ2 1576 aa7.45□□□□□ -1.22
CHD7-205ENST00000527825 ABCA10Q8WWZ4 1543 aa7.44□□□□□ -1.22
CHD7-205ENST00000527825 RASEFQ8IZ41 740 aa7.44□□□□□ -1.22
CHD7-205ENST00000527825 MS4A3Q96HJ5 214 aa7.44□□□□□ -1.22
CHD7-205ENST00000527825 JPH4Q96JJ6 628 aa7.43□□□□□ -1.22
CHD7-205ENST00000527825 FHAD1B1AJZ9 1412 aa7.43□□□□□ -1.22
CHD7-205ENST00000527825 CUL7Q14999 1698 aa7.42□□□□□ -1.22
CHD7-205ENST00000527825 TEX14Q8IWB6 1497 aa7.41□□□□□ -1.22
CHD7-205ENST00000527825 GLI2P10070 1586 aa7.41□□□□□ -1.22
CHD7-205ENST00000527825 KIF21BO75037 1637 aa7.41□□□□□ -1.22
CHD7-205ENST00000527825 ZBTB47Q9UFB7 747 aaPredicted RBP7.4□□□□□ -1.22
CHD7-205ENST00000527825 RUSC2Q8N2Y8 1516 aa7.4□□□□□ -1.22
CHD7-205ENST00000527825 MAP3K4Q9Y6R4 1608 aa7.39□□□□□ -1.23
CHD7-205ENST00000527825 KIF12Q96FN5 646 aa7.39□□□□□ -1.23
CHD7-205ENST00000527825 NUBP1P53384 320 aa7.38□□□□□ -1.23
CHD7-205ENST00000527825 PLB1Q6P1J6 1458 aa7.37□□□□□ -1.23
CHD7-205ENST00000527825 ERICH3Q5RHP9 1530 aa7.37□□□□□ -1.23
CHD7-205ENST00000527825 ASXL2Q76L83 1435 aa7.36□□□□□ -1.23
CHD7-205ENST00000527825 TTBK1Q5TCY1 1321 aaPredicted RBP7.36□□□□□ -1.23
CHD7-205ENST00000527825 MAP3K13O43283 966 aa7.36□□□□□ -1.23
CHD7-205ENST00000527825 VASPP50552 380 aaPredicted RBP7.36□□□□□ -1.23
CHD7-205ENST00000527825 ASTLQ6HA08 431 aaPredicted RBP7.36□□□□□ -1.23
CHD7-205ENST00000527825 PELP1Q8IZL8 1130 aaKnown RBP7.36□□□□□ -1.23
CHD7-205ENST00000527825 CERKQ8TCT0 537 aa7.36□□□□□ -1.23
CHD7-205ENST00000527825 PCF11O94913 1555 aaKnown RBP7.36□□□□□ -1.23
CHD7-205ENST00000527825 COL17A1Q9UMD9 1497 aaPredicted RBP7.36□□□□□ -1.23
CHD7-205ENST00000527825 ATMINO43313 823 aaPredicted RBP7.35□□□□□ -1.23
CHD7-205ENST00000527825 ABCC2Q92887 1545 aa7.34□□□□□ -1.23
CHD7-205ENST00000527825 WRNQ14191 1432 aaPredicted RBP eCLIP7.34□□□□□ -1.23
CHD7-205ENST00000527825 KIAA0586Q9BVV6 1533 aa7.33□□□□□ -1.24
CHD7-205ENST00000527825 PTPRMP28827 1452 aa7.33□□□□□ -1.24
CHD7-205ENST00000527825 TRPC6Q9Y210 931 aa7.33□□□□□ -1.24
CHD7-205ENST00000527825 FAM212AQ96EL1 285 aa7.32□□□□□ -1.24
CHD7-205ENST00000527825 ADAMTSL3P82987 1691 aa7.32□□□□□ -1.24
CHD7-205ENST00000527825 POTEB2H3BUK9 544 aa7.31□□□□□ -1.24
CHD7-205ENST00000527825 PTPRGP23470 1445 aa7.31□□□□□ -1.24
CHD7-205ENST00000527825 ATN1P54259 1190 aaPredicted RBP7.31□□□□□ -1.24
CHD7-205ENST00000527825 BMP2KQ9NSY1 1161 aaPredicted RBP7.31□□□□□ -1.24
CHD7-205ENST00000527825 EPRSP07814 1512 aaKnown RBP7.31□□□□□ -1.24
CHD7-205ENST00000527825 BIVM-ERCC5R4GMW8 1640 aa7.3□□□□□ -1.24
CHD7-205ENST00000527825 METRNQ9UJH8 293 aa7.3□□□□□ -1.24
CHD7-205ENST00000527825 RIMS1Q86UR5 1692 aaKnown RBP7.3□□□□□ -1.24
CHD7-205ENST00000527825 CFAP43Q8NDM7 1665 aa7.3□□□□□ -1.24
CHD7-205ENST00000527825 ZCCHC11Q5TAX3 1644 aaKnown RBP7.3□□□□□ -1.24
CHD7-205ENST00000527825 BCORL1Q5H9F3 1711 aa7.3□□□□□ -1.24
CHD7-205ENST00000527825 SLC39A7Q92504 469 aa7.29□□□□□ -1.24
CHD7-205ENST00000527825 PCDHB13Q9Y5F0 798 aa7.29□□□□□ -1.24
CHD7-205ENST00000527825 MADDQ8WXG6 1647 aa7.29□□□□□ -1.24
CHD7-205ENST00000527825 C7P10643 843 aa7.28□□□□□ -1.24
CHD7-205ENST00000527825 TIE1P35590 1138 aa7.28□□□□□ -1.24
CHD7-205ENST00000527825 SGIP1Q9BQI5 828 aa7.28□□□□□ -1.24
CHD7-205ENST00000527825 CARMIL2Q6F5E8 1435 aa7.27□□□□□ -1.24
CHD7-205ENST00000527825 KLHL34Q8N239 644 aa7.27□□□□□ -1.25
CHD7-205ENST00000527825 TNIKQ9UKE5 1360 aa7.26□□□□□ -1.25
CHD7-205ENST00000527825 TTLL13PA6NNM8 815 aa7.26□□□□□ -1.25
CHD7-205ENST00000527825 HSPA2P54652 639 aa7.26□□□□□ -1.25
CHD7-205ENST00000527825 DCAF8Q5TAQ9 597 aa7.26□□□□□ -1.25
CHD7-205ENST00000527825 IFNL1Q8IU54 200 aa7.26□□□□□ -1.25
CHD7-205ENST00000527825 IFNLR1Q8IU57 520 aaPredicted RBP7.26□□□□□ -1.25
CHD7-205ENST00000527825 OTUD5Q96G74 571 aa7.26□□□□□ -1.25
CHD7-205ENST00000527825 ARID4BQ4LE39 1312 aaPredicted RBP7.26□□□□□ -1.25
CHD7-205ENST00000527825 UHRF1BP1LA0JNW5 1464 aa7.25□□□□□ -1.25
CHD7-205ENST00000527825 PYGBP11216 843 aa7.24□□□□□ -1.25
CHD7-205ENST00000527825 CD109Q6YHK3 1445 aa7.24□□□□□ -1.25
CHD7-205ENST00000527825 UACAQ9BZF9 1416 aa7.24□□□□□ -1.25
CHD7-205ENST00000527825 MAGI3Q5TCQ9 1506 aa7.22□□□□□ -1.25
CHD7-205ENST00000527825 KDM5BQ9UGL1 1544 aa7.22□□□□□ -1.25
CHD7-205ENST00000527825 POTEJP0CG39 1038 aa7.22□□□□□ -1.25
CHD7-205ENST00000527825 WDR7Q9Y4E6 1490 aa7.22□□□□□ -1.25
CHD7-205ENST00000527825 POTEFA5A3E0 1075 aa7.21□□□□□ -1.26
CHD7-205ENST00000527825 TRIM35Q9UPQ4 493 aa7.21□□□□□ -1.26
CHD7-205ENST00000527825 PREX1Q8TCU6 1659 aa7.21□□□□□ -1.26
CHD7-205ENST00000527825 FER1L4A9Z1Z3 1794 aa7.2□□□□□ -1.26
CHD7-205ENST00000527825 IQGAP2Q13576 1575 aa7.2□□□□□ -1.26
CHD7-205ENST00000527825 GSE1Q14687 1217 aa7.19□□□□□ -1.26
CHD7-205ENST00000527825 KCNH8Q96L42 1107 aa7.19□□□□□ -1.26
CHD7-205ENST00000527825 TMEM106CQ9BVX2 250 aa7.19□□□□□ -1.26
CHD7-205ENST00000527825 ARAP3Q8WWN8 1544 aa7.18□□□□□ -1.26
CHD7-205ENST00000527825 SPOCK2Q92563 424 aa7.18□□□□□ -1.26
CHD7-205ENST00000527825 COLQQ9Y215 455 aaPredicted RBP7.18□□□□□ -1.26
CHD7-205ENST00000527825 STRCQ7RTU9 1775 aa7.18□□□□□ -1.26
CHD7-205ENST00000527825 SEC24BO95487 1268 aa7.17□□□□□ -1.26
CHD7-205ENST00000527825 PCDHB8Q9UN66 801 aa7.17□□□□□ -1.26
CHD7-205ENST00000527825 IER5LQ5T953 404 aa7.16□□□□□ -1.26
CHD7-205ENST00000527825 POGZQ7Z3K3 1410 aa7.16□□□□□ -1.26
CHD7-205ENST00000527825 MAMSTRQ6ZN01 415 aa7.15□□□□□ -1.26
CHD7-205ENST00000527825 MED1Q15648 1581 aaPredicted RBP7.14□□□□□ -1.27
CHD7-205ENST00000527825 IQSEC2Q5JU85 1478 aa7.14□□□□□ -1.27
CHD7-205ENST00000527825 YEATS2Q9ULM3 1422 aa7.14□□□□□ -1.27
CHD7-205ENST00000527825 ARHGEF40Q8TER5 1519 aa7.13□□□□□ -1.27
CHD7-205ENST00000527825 FANCAO15360 1455 aa7.13□□□□□ -1.27
CHD7-205ENST00000527825 PHLDB1Q86UU1 1377 aa7.13□□□□□ -1.27
CHD7-205ENST00000527825 SCUBE2Q9NQ36 999 aa7.13□□□□□ -1.27
CHD7-205ENST00000527825 KIAA0556O60303 1618 aa7.12□□□□□ -1.27
CHD7-205ENST00000527825 TTC37Q6PGP7 1564 aa7.12□□□□□ -1.27
CHD7-205ENST00000527825 DISP1Q96F81 1524 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms