RNA–Protein interactions for RNA: ENST00000527825.1

CHD7-205, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 434 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-205ENST00000527825 AEBP2Q6ZN18 517 aaPredicted RBP15.07■□□□□ 0
CHD7-205ENST00000527825 CHIC1Q5VXU3 224 aa14.36□□□□□ -0.11
CHD7-205ENST00000527825 SENP3Q9H4L4 574 aaPredicted RBP12.83□□□□□ -0.36
CHD7-205ENST00000527825 PHF23Q9BUL5 403 aaPredicted RBP12.67□□□□□ -0.38
CHD7-205ENST00000527825 FOXD1Q16676 465 aa11.96□□□□□ -0.49
CHD7-205ENST00000527825 PLPPR3Q6T4P5 718 aa11.5□□□□□ -0.57
CHD7-205ENST00000527825 PPP6R1Q9UPN7 881 aa11.24□□□□□ -0.61
CHD7-205ENST00000527825 ADRA2BP18089 450 aa11.2□□□□□ -0.62
CHD7-205ENST00000527825 PIAS4Q8N2W9 510 aaPredicted RBP11.19□□□□□ -0.62
CHD7-205ENST00000527825 MSH5O43196 834 aa11.15□□□□□ -0.62
CHD7-205ENST00000527825 POTEDQ86YR6 584 aa10.78□□□□□ -0.68
CHD7-205ENST00000527825 NISCHQ9Y2I1 1504 aa10.29□□□□□ -0.76
CHD7-205ENST00000527825 MAPK8IP2Q13387 824 aaPredicted RBP10.27□□□□□ -0.77
CHD7-205ENST00000527825 SCAF1Q9H7N4 1312 aaKnown RBP10.22□□□□□ -0.77
CHD7-205ENST00000527825 DMRT2Q9Y5R5 561 aa10.19□□□□□ -0.78
CHD7-205ENST00000527825 PPP4R3CPQ6ZMV5 832 aa10.09□□□□□ -0.79
CHD7-205ENST00000527825 ABCC9O60706 1549 aa9.93□□□□□ -0.82
CHD7-205ENST00000527825 CNKSR2Q8WXI2 1034 aa9.88□□□□□ -0.83
CHD7-205ENST00000527825 HOXD11P31277 338 aaPredicted RBP9.83□□□□□ -0.84
CHD7-205ENST00000527825 RNF216Q9NWF9 866 aaPredicted RBP9.78□□□□□ -0.84
CHD7-205ENST00000527825 DCAF8L1A6NGE4 600 aa9.77□□□□□ -0.85
CHD7-205ENST00000527825 NCBP3Q53F19 620 aaKnown RBP9.71□□□□□ -0.86
CHD7-205ENST00000527825 DNAJC5BQ9UF47 199 aa9.61□□□□□ -0.87
CHD7-205ENST00000527825 NPM3O75607 178 aaKnown RBP9.6□□□□□ -0.87
CHD7-205ENST00000527825 CCDC180Q9P1Z9 1646 aa9.54□□□□□ -0.88
CHD7-205ENST00000527825 CACNB1Q02641 598 aaPredicted RBP9.53□□□□□ -0.88
CHD7-205ENST00000527825 RNF39Q9H2S5 420 aa9.53□□□□□ -0.88
CHD7-205ENST00000527825 KCNA4P22459 653 aa9.48□□□□□ -0.89
CHD7-205ENST00000527825 C1QBPQ07021 282 aaKnown RBP9.39□□□□□ -0.91
CHD7-205ENST00000527825 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.37□□□□□ -0.916e-7■□□□□ 10.9
CHD7-205ENST00000527825 RB1CC1Q8TDY2 1594 aa9.29□□□□□ -0.92
CHD7-205ENST00000527825 DNAJC5Q9H3Z4 198 aa9.23□□□□□ -0.93
CHD7-205ENST00000527825 U3KPZ7 1027 aaPredicted RBP9.19□□□□□ -0.94
CHD7-205ENST00000527825 UNC13AQ9UPW8 1703 aa9.15□□□□□ -0.94
CHD7-205ENST00000527825 SLC4A2P04920 1241 aa9.15□□□□□ -0.94
CHD7-205ENST00000527825 PABPN1Q86U42 306 aaKnown RBP eCLIP9.13□□□□□ -0.95
CHD7-205ENST00000527825 NACADO15069 1562 aa9.07□□□□□ -0.96
CHD7-205ENST00000527825 SPINK5Q9NQ38 1064 aaPredicted RBP9.04□□□□□ -0.96
CHD7-205ENST00000527825 CAPN15O75808 1086 aa9.01□□□□□ -0.97
CHD7-205ENST00000527825 CECR2Q9BXF3 1484 aa8.99□□□□□ -0.97
CHD7-205ENST00000527825 DCAF8L2P0C7V8 631 aa8.97□□□□□ -0.97
CHD7-205ENST00000527825 CC2D2AQ9P2K1 1620 aa8.97□□□□□ -0.97
CHD7-205ENST00000527825 BICRAQ9NZM4 1560 aa8.96□□□□□ -0.97
CHD7-205ENST00000527825 DSG3P32926 999 aa8.95□□□□□ -0.98
CHD7-205ENST00000527825 SLC4A1APQ9BWU0 796 aaKnown RBP8.95□□□□□ -0.98
CHD7-205ENST00000527825 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.93□□□□□ -0.98
CHD7-205ENST00000527825 HNRNPUL2Q1KMD3 747 aaKnown RBP8.93□□□□□ -0.98
CHD7-205ENST00000527825 APLP2Q06481 763 aa8.91□□□□□ -0.98
CHD7-205ENST00000527825 SAMD1Q6SPF0 538 aaPredicted RBP8.9□□□□□ -0.98
CHD7-205ENST00000527825 TRHP20396 242 aaPredicted RBP8.89□□□□□ -0.99
CHD7-205ENST00000527825 MYCNP04198 464 aaPredicted RBP8.87□□□□□ -0.99
CHD7-205ENST00000527825 ZNF219Q9P2Y4 722 aaPredicted RBP8.86□□□□□ -0.99
CHD7-205ENST00000527825 ABCB7O75027 752 aa8.83□□□□□ -1
CHD7-205ENST00000527825 EIF4G1Q04637 1599 aaKnown RBP8.82□□□□□ -1
CHD7-205ENST00000527825 FOXD4L1Q9NU39 408 aa8.81□□□□□ -1
CHD7-205ENST00000527825 SHROOM4Q9ULL8 1493 aa8.81□□□□□ -1
CHD7-205ENST00000527825 CUX2O14529 1486 aa8.76□□□□□ -1.01
CHD7-205ENST00000527825 MYO15BQ96JP2 1530 aa8.74□□□□□ -1.01
CHD7-205ENST00000527825 ZBTB22O15209 634 aa8.73□□□□□ -1.01
CHD7-205ENST00000527825 TRIM41Q8WV44 630 aa8.72□□□□□ -1.01
CHD7-205ENST00000527825 ATF5Q9Y2D1 282 aaPredicted RBP8.67□□□□□ -1.02
CHD7-205ENST00000527825 ERCC6Q03468 1493 aa8.66□□□□□ -1.02
CHD7-205ENST00000527825 POLA2Q14181 598 aa8.66□□□□□ -1.02
CHD7-205ENST00000527825 SCRIBQ14160 1630 aa8.65□□□□□ -1.02
CHD7-205ENST00000527825 EHMT2Q96KQ7 1210 aa8.59□□□□□ -1.03
CHD7-205ENST00000527825 CSRNP3Q8WYN3 585 aa8.53□□□□□ -1.04
CHD7-205ENST00000527825 RBM42Q9BTD8 480 aaKnown RBP8.52□□□□□ -1.05
CHD7-205ENST00000527825 ATXN8OSP0DMR3 200 aa8.51□□□□□ -1.05
CHD7-205ENST00000527825 ZBTB12Q9Y330 459 aaPredicted RBP8.48□□□□□ -1.05
CHD7-205ENST00000527825 DCAF1Q9Y4B6 1507 aa8.46□□□□□ -1.05
CHD7-205ENST00000527825 POTEHQ6S545 545 aa8.46□□□□□ -1.06
CHD7-205ENST00000527825 THOC2Q8NI27 1593 aaKnown RBP8.42□□□□□ -1.06
CHD7-205ENST00000527825 ZCCHC6Q5VYS8 1495 aaKnown RBP8.41□□□□□ -1.06
CHD7-205ENST00000527825 OSCARQ8IYS5 282 aa8.41□□□□□ -1.06
CHD7-205ENST00000527825 NESP48681 1621 aa8.37□□□□□ -1.07
CHD7-205ENST00000527825 SMARCA2P51531 1590 aa8.37□□□□□ -1.07
CHD7-205ENST00000527825 KIF21AQ7Z4S6 1674 aa8.36□□□□□ -1.07
CHD7-205ENST00000527825 BAZ1AQ9NRL2 1556 aaPredicted RBP8.35□□□□□ -1.07
CHD7-205ENST00000527825 AKT1S1Q96B36 256 aa8.34□□□□□ -1.07
CHD7-205ENST00000527825 CHRDL2Q6WN34 429 aa8.32□□□□□ -1.08
CHD7-205ENST00000527825 NCAPD3P42695 1498 aa8.32□□□□□ -1.08
CHD7-205ENST00000527825 FBLN2P98095 1184 aa8.3□□□□□ -1.08
CHD7-205ENST00000527825 LAMC3Q9Y6N6 1575 aa8.3□□□□□ -1.08
CHD7-205ENST00000527825 MKRN4PQ13434 485 aaPredicted RBP8.28□□□□□ -1.08
CHD7-205ENST00000527825 REM2Q8IYK8 340 aaPredicted RBP8.27□□□□□ -1.09
CHD7-205ENST00000527825 RIMBP3CA6NJZ7 1639 aa8.27□□□□□ -1.09
CHD7-205ENST00000527825 RIMBP3BA6NNM3 1639 aa8.27□□□□□ -1.09
CHD7-205ENST00000527825 RIMBP3Q9UFD9 1639 aa8.27□□□□□ -1.09
CHD7-205ENST00000527825 HMGXB3Q12766 1538 aa8.27□□□□□ -1.09
CHD7-205ENST00000527825 ATAD2BQ9ULI0 1458 aa8.24□□□□□ -1.09
CHD7-205ENST00000527825 PDS5BQ9NTI5 1447 aa8.23□□□□□ -1.09
CHD7-205ENST00000527825 SPDYE2BA6NHP3 402 aa8.23□□□□□ -1.09
CHD7-205ENST00000527825 SPDYE6P0CI01 402 aa8.23□□□□□ -1.09
CHD7-205ENST00000527825 SPDYE2Q495Y8 402 aa8.23□□□□□ -1.09
CHD7-205ENST00000527825 MRC2Q9UBG0 1479 aa8.19□□□□□ -1.1
CHD7-205ENST00000527825 BAZ1BQ9UIG0 1483 aaKnown RBP8.19□□□□□ -1.1
CHD7-205ENST00000527825 PITPNM1O00562 1244 aa8.19□□□□□ -1.1
CHD7-205ENST00000527825 SMARCA4P51532 1647 aa8.18□□□□□ -1.1
CHD7-205ENST00000527825 WDR62O43379 1518 aa8.17□□□□□ -1.1
CHD7-205ENST00000527825 ARHGEF11O15085 1522 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms