RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 EHBP1L1Q8N3D4 1523 aa25.57■■□□□ 1.68
SSSCA1-202ENST00000526433 CDC42BPAQ5VT25 1732 aa25.56■■□□□ 1.68
SSSCA1-202ENST00000526433 PREX2Q70Z35 1606 aa25.55■■□□□ 1.68
SSSCA1-202ENST00000526433 GPATCH8Q9UKJ3 1502 aaKnown RBP25.55■■□□□ 1.68
SSSCA1-202ENST00000526433 CCNB3Q8WWL7 1395 aa25.55■■□□□ 1.68
SSSCA1-202ENST00000526433 APLP2Q06481 763 aa25.54■■□□□ 1.68
SSSCA1-202ENST00000526433 FRMPD1Q5SYB0 1578 aa25.53■■□□□ 1.68
SSSCA1-202ENST00000526433 RICTORQ6R327 1708 aa25.53■■□□□ 1.68
SSSCA1-202ENST00000526433 MAP3K1Q13233 1512 aa25.53■■□□□ 1.68
SSSCA1-202ENST00000526433 KANK4Q5T7N3 995 aaPredicted RBP25.52■■□□□ 1.68
SSSCA1-202ENST00000526433 ZNF777Q9ULD5 760 aaPredicted RBP25.52■■□□□ 1.68
SSSCA1-202ENST00000526433 CFDP1Q9UEE9 299 aaPredicted RBP25.51■■□□□ 1.67
SSSCA1-202ENST00000526433 LRRC9Q6ZRR7 1453 aa25.5■■□□□ 1.67
SSSCA1-202ENST00000526433 POGZQ7Z3K3 1410 aa25.47■■□□□ 1.67
SSSCA1-202ENST00000526433 AFAP1Q8N556 730 aa25.47■■□□□ 1.67
SSSCA1-202ENST00000526433 SUPT6HQ7KZ85 1726 aaKnown RBP25.46■■□□□ 1.67
SSSCA1-202ENST00000526433 KDM4FA0A1W2PPD8 638 aa25.46■■□□□ 1.67
SSSCA1-202ENST00000526433 NCOA2Q15596 1464 aa25.46■■□□□ 1.67
SSSCA1-202ENST00000526433 AEBP2Q6ZN18 517 aaPredicted RBP25.43■■□□□ 1.66
SSSCA1-202ENST00000526433 ZMYM4Q5VZL5 1548 aa25.42■■□□□ 1.66
SSSCA1-202ENST00000526433 ARHGEF12Q9NZN5 1544 aa25.42■■□□□ 1.66
SSSCA1-202ENST00000526433 HNRNPMP52272 730 aaKnown RBP eCLIP25.41■■□□□ 1.66
SSSCA1-202ENST00000526433 ABCC1P33527 1531 aa25.41■■□□□ 1.66
SSSCA1-202ENST00000526433 ZNF518AQ6AHZ1 1483 aa25.4■■□□□ 1.66
SSSCA1-202ENST00000526433 MAGI2Q86UL8 1455 aa25.4■■□□□ 1.66
SSSCA1-202ENST00000526433 SAMD9LQ8IVG5 1584 aa25.4■■□□□ 1.66
SSSCA1-202ENST00000526433 TRAPPC8Q9Y2L5 1435 aa25.4■■□□□ 1.66
SSSCA1-202ENST00000526433 ZNF644Q9H582 1327 aaPredicted RBP25.38■■□□□ 1.65
SSSCA1-202ENST00000526433 MYT1LQ9UL68 1186 aa25.38■■□□□ 1.65
SSSCA1-202ENST00000526433 ITSN2Q9NZM3 1697 aa25.38■■□□□ 1.65
SSSCA1-202ENST00000526433 YEATS2Q9ULM3 1422 aa25.37■■□□□ 1.65
SSSCA1-202ENST00000526433 ZFYVE16Q7Z3T8 1539 aa25.36■■□□□ 1.65
SSSCA1-202ENST00000526433 KIAA1107Q9UPP5 1409 aa25.36■■□□□ 1.65
SSSCA1-202ENST00000526433 PLEKHH2Q8IVE3 1493 aa25.35■■□□□ 1.65
SSSCA1-202ENST00000526433 ARHGEF40Q8TER5 1519 aa25.34■■□□□ 1.65
SSSCA1-202ENST00000526433 KDM5CP41229 1560 aa25.34■■□□□ 1.65
SSSCA1-202ENST00000526433 ARID4BQ4LE39 1312 aaPredicted RBP25.34■■□□□ 1.65
SSSCA1-202ENST00000526433 SYCP2Q9BX26 1530 aa25.32■■□□□ 1.64
SSSCA1-202ENST00000526433 MLH3Q9UHC1 1453 aa25.3■■□□□ 1.64
SSSCA1-202ENST00000526433 ATP10AO60312 1499 aa25.29■■□□□ 1.64
SSSCA1-202ENST00000526433 SPAG9O60271 1321 aaKnown RBP25.28■■□□□ 1.64
SSSCA1-202ENST00000526433 HECW2Q9P2P5 1572 aa25.27■■□□□ 1.64
SSSCA1-202ENST00000526433 MYOM3Q5VTT5 1437 aa25.25■■□□□ 1.63
SSSCA1-202ENST00000526433 MBD5Q9P267 1494 aa25.25■■□□□ 1.63
SSSCA1-202ENST00000526433 CAMSAP2Q08AD1 1489 aa25.23■■□□□ 1.63
SSSCA1-202ENST00000526433 KIDINS220Q9ULH0 1771 aa25.23■■□□□ 1.63
SSSCA1-202ENST00000526433 C9orf84Q5VXU9 1444 aa25.22■■□□□ 1.63
SSSCA1-202ENST00000526433 RSPH4AQ5TD94 716 aa25.22■■□□□ 1.63
SSSCA1-202ENST00000526433 MIA2Q96PC5 1412 aa25.21■■□□□ 1.63
SSSCA1-202ENST00000526433 DIP2CQ9Y2E4 1556 aa25.2■■□□□ 1.62
SSSCA1-202ENST00000526433 SIGLEC1Q9BZZ2 1709 aa25.2■■□□□ 1.62
SSSCA1-202ENST00000526433 BCORL1Q5H9F3 1711 aa25.19■■□□□ 1.62
SSSCA1-202ENST00000526433 ABCA6Q8N139 1617 aa25.19■■□□□ 1.62
SSSCA1-202ENST00000526433 MLECQ14165 292 aa25.18■■□□□ 1.62
SSSCA1-202ENST00000526433 ADAMTSL3P82987 1691 aa25.17■■□□□ 1.62
SSSCA1-202ENST00000526433 ATP7AQ04656 1500 aa25.15■■□□□ 1.62
SSSCA1-202ENST00000526433 TSPY4P0CV99 314 aa25.14■■□□□ 1.62
SSSCA1-202ENST00000526433 TSPY10P0CW01 314 aa25.14■■□□□ 1.62
SSSCA1-202ENST00000526433 PPARGC1BQ86YN6 1023 aaKnown RBP25.14■■□□□ 1.62
SSSCA1-202ENST00000526433 CCDC141Q6ZP82 1450 aa25.14■■□□□ 1.61
SSSCA1-202ENST00000526433 ARHGEF5Q12774 1597 aa25.12■■□□□ 1.61
SSSCA1-202ENST00000526433 REREQ9P2R6 1566 aa25.12■■□□□ 1.61
SSSCA1-202ENST00000526433 INO80Q9ULG1 1556 aaPredicted RBP25.12■■□□□ 1.61
SSSCA1-202ENST00000526433 RTEL1-TNFRSF6BF6WH68 1400 aa25.12■■□□□ 1.61
SSSCA1-202ENST00000526433 FGD6Q6ZV73 1430 aa25.11■■□□□ 1.61
SSSCA1-202ENST00000526433 PTPN23Q9H3S7 1636 aa25.09■■□□□ 1.61
SSSCA1-202ENST00000526433 MADDQ8WXG6 1647 aa25.08■■□□□ 1.61
SSSCA1-202ENST00000526433 AGLP35573 1532 aa25.07■■□□□ 1.6
SSSCA1-202ENST00000526433 A2MP01023 1474 aa25.06■■□□□ 1.6
SSSCA1-202ENST00000526433 PTPRMP28827 1452 aa25.05■■□□□ 1.6
SSSCA1-202ENST00000526433 TCOF1Q13428 1488 aaKnown RBP25.03■■□□□ 1.6
SSSCA1-202ENST00000526433 ADGBQ8N7X0 1667 aa25.02■■□□□ 1.6
SSSCA1-202ENST00000526433 RIMS1Q86UR5 1692 aaKnown RBP25.01■■□□□ 1.59
SSSCA1-202ENST00000526433 FAM50AQ14320 339 aaKnown RBP25.01■■□□□ 1.59
SSSCA1-202ENST00000526433 DHX29Q7Z478 1369 aaKnown RBP25.01■■□□□ 1.59
SSSCA1-202ENST00000526433 ABCC5O15440 1437 aa25■■□□□ 1.59
SSSCA1-202ENST00000526433 FER1L4A9Z1Z3 1794 aa24.99■■□□□ 1.59
SSSCA1-202ENST00000526433 PLPPR3Q6T4P5 718 aa24.98■■□□□ 1.59
SSSCA1-202ENST00000526433 PLXNC1O60486 1568 aa24.97■■□□□ 1.59
SSSCA1-202ENST00000526433 MAST1Q9Y2H9 1570 aa24.97■■□□□ 1.59
SSSCA1-202ENST00000526433 ESF1Q9H501 851 aaKnown RBP24.97■■□□□ 1.59
SSSCA1-202ENST00000526433 DAPK1P53355 1430 aa24.95■■□□□ 1.59
SSSCA1-202ENST00000526433 GGT6Q6P531 493 aa24.95■■□□□ 1.58
SSSCA1-202ENST00000526433 KIF3BO15066 747 aa24.93■■□□□ 1.58
SSSCA1-202ENST00000526433 CHIC2Q9UKJ5 165 aa24.93■■□□□ 1.58
SSSCA1-202ENST00000526433 DNMT1P26358 1616 aaKnown RBP24.93■■□□□ 1.58
SSSCA1-202ENST00000526433 CEBPAP49715 358 aaPredicted RBP24.91■■□□□ 1.58
SSSCA1-202ENST00000526433 SHANK2Q9UPX8 1470 aa24.9■■□□□ 1.58
SSSCA1-202ENST00000526433 CROCC2H7BZ55 1655 aa24.9■■□□□ 1.58
SSSCA1-202ENST00000526433 RRP7BPQ9NSQ0 103 aa24.89■■□□□ 1.58
SSSCA1-202ENST00000526433 PPP6R1Q9UPN7 881 aa24.88■■□□□ 1.57
SSSCA1-202ENST00000526433 CNTLNQ9NXG0 1405 aa24.86■■□□□ 1.57
SSSCA1-202ENST00000526433 ANKRD30AQ9BXX3 1397 aa24.84■■□□□ 1.57
SSSCA1-202ENST00000526433 KIF15Q9NS87 1388 aa24.84■■□□□ 1.57
SSSCA1-202ENST00000526433 DUOX2Q9NRD8 1548 aa24.82■■□□□ 1.56
SSSCA1-202ENST00000526433 NCOA1Q15788 1441 aa24.81■■□□□ 1.56
SSSCA1-202ENST00000526433 ZMYM3Q14202 1370 aa24.8■■□□□ 1.56
SSSCA1-202ENST00000526433 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.8■■□□□ 1.56
SSSCA1-202ENST00000526433 C3P01024 1663 aa24.79■■□□□ 1.56
SSSCA1-202ENST00000526433 ITGAEP38570 1179 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 154.9 ms