RNA–Protein interactions for RNA: ENST00000525051.5

SCRIB-204, Transcript of scribbled planar cell polarity protein, humanhuman

TSL 1 (best)

Gene SCRIB, Length 1,685 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRIB-204ENST00000525051 CDC42BPAQ5VT25 1732 aa28.32■■■□□ 2.12
SCRIB-204ENST00000525051 KDM6BO15054 1643 aa28.32■■■□□ 2.12
SCRIB-204ENST00000525051 COL17A1Q9UMD9 1497 aaPredicted RBP28.32■■■□□ 2.12
SCRIB-204ENST00000525051 SUPT6HQ7KZ85 1726 aaKnown RBP28.32■■■□□ 2.12
SCRIB-204ENST00000525051 CDC42BPBQ9Y5S2 1711 aa28.32■■■□□ 2.12
SCRIB-204ENST00000525051 NCOA2Q15596 1464 aa28.31■■■□□ 2.12
SCRIB-204ENST00000525051 FANCAO15360 1455 aa28.29■■■□□ 2.12
SCRIB-204ENST00000525051 FGD6Q6ZV73 1430 aa28.28■■■□□ 2.12
SCRIB-204ENST00000525051 PREX2Q70Z35 1606 aa28.27■■■□□ 2.12
SCRIB-204ENST00000525051 NEO1Q92859 1461 aa28.26■■■□□ 2.11
SCRIB-204ENST00000525051 ARHGAP5Q13017 1502 aa28.24■■■□□ 2.11
SCRIB-204ENST00000525051 ARAP3Q8WWN8 1544 aa28.24■■■□□ 2.11
SCRIB-204ENST00000525051 GPATCH8Q9UKJ3 1502 aaKnown RBP28.24■■■□□ 2.11
SCRIB-204ENST00000525051 MYOM3Q5VTT5 1437 aa28.24■■■□□ 2.11
SCRIB-204ENST00000525051 AKNAQ7Z591 1439 aa28.22■■■□□ 2.11
SCRIB-204ENST00000525051 CFAP74Q9C0B2 1584 aa28.22■■■□□ 2.11
SCRIB-204ENST00000525051 EFCAB2Q5VUJ9 269 aa28.2■■■□□ 2.11
SCRIB-204ENST00000525051 DHX57Q6P158 1386 aaKnown RBP28.2■■■□□ 2.1
SCRIB-204ENST00000525051 FAM50AQ14320 339 aaKnown RBP28.16■■■□□ 2.1
SCRIB-204ENST00000525051 CLSPNQ9HAW4 1339 aa28.15■■■□□ 2.1
SCRIB-204ENST00000525051 ITSN2Q9NZM3 1697 aa28.14■■■□□ 2.1
SCRIB-204ENST00000525051 ADGRL1O94910 1474 aa28.14■■■□□ 2.1
SCRIB-204ENST00000525051 RAPGEF3O95398 923 aa28.14■■■□□ 2.1
SCRIB-204ENST00000525051 ITGAEP38570 1179 aa28.13■■■□□ 2.09
SCRIB-204ENST00000525051 CFDP1Q9UEE9 299 aaPredicted RBP28.13■■■□□ 2.09
SCRIB-204ENST00000525051 ZNF777Q9ULD5 760 aaPredicted RBP28.13■■■□□ 2.09
SCRIB-204ENST00000525051 TCOF1Q13428 1488 aaKnown RBP28.12■■■□□ 2.09
SCRIB-204ENST00000525051 FRMPD1Q5SYB0 1578 aa28.11■■■□□ 2.09
SCRIB-204ENST00000525051 SAMD9LQ8IVG5 1584 aa28.11■■■□□ 2.09
SCRIB-204ENST00000525051 SCAPERQ9BY12 1400 aa28.11■■■□□ 2.09
SCRIB-204ENST00000525051 SETD5Q9C0A6 1442 aa28.11■■■□□ 2.09
SCRIB-204ENST00000525051 RAB3GAP2Q9H2M9 1393 aa28.11■■■□□ 2.09
SCRIB-204ENST00000525051 RICTORQ6R327 1708 aa28.1■■■□□ 2.09
SCRIB-204ENST00000525051 PTPN23Q9H3S7 1636 aa28.09■■■□□ 2.09
SCRIB-204ENST00000525051 DENND4BO75064 1496 aaPredicted RBP28.08■■■□□ 2.09
SCRIB-204ENST00000525051 ZNF644Q9H582 1327 aaPredicted RBP28.08■■■□□ 2.08
SCRIB-204ENST00000525051 ARHGEF12Q9NZN5 1544 aa28.07■■■□□ 2.08
SCRIB-204ENST00000525051 ABCC1P33527 1531 aa28.07■■■□□ 2.08
SCRIB-204ENST00000525051 MIA2Q96PC5 1412 aa28.06■■■□□ 2.08
SCRIB-204ENST00000525051 PTPRKQ15262 1439 aa28.05■■■□□ 2.08
SCRIB-204ENST00000525051 POGZQ7Z3K3 1410 aa28.02■■■□□ 2.08
SCRIB-204ENST00000525051 SYCP2Q9BX26 1530 aa28.01■■■□□ 2.07
SCRIB-204ENST00000525051 HNRNPMP52272 730 aaKnown RBP eCLIP28■■■□□ 2.07
SCRIB-204ENST00000525051 AFAP1Q8N556 730 aa28■■■□□ 2.07
SCRIB-204ENST00000525051 TRAPPC8Q9Y2L5 1435 aa27.99■■■□□ 2.07
SCRIB-204ENST00000525051 CAMSAP2Q08AD1 1489 aa27.96■■■□□ 2.07
SCRIB-204ENST00000525051 HFM1A2PYH4 1435 aa27.95■■■□□ 2.07
SCRIB-204ENST00000525051 ZNF518AQ6AHZ1 1483 aa27.94■■■□□ 2.06
SCRIB-204ENST00000525051 PLEKHH2Q8IVE3 1493 aa27.94■■■□□ 2.06
SCRIB-204ENST00000525051 KIAA1107Q9UPP5 1409 aa27.94■■■□□ 2.06
SCRIB-204ENST00000525051 ZMYM4Q5VZL5 1548 aa27.94■■■□□ 2.06
SCRIB-204ENST00000525051 KDM5CP41229 1560 aa27.93■■■□□ 2.06
SCRIB-204ENST00000525051 MBD5Q9P267 1494 aa27.92■■■□□ 2.06
SCRIB-204ENST00000525051 YEATS2Q9ULM3 1422 aa27.88■■■□□ 2.05
SCRIB-204ENST00000525051 NAIPQ13075 1403 aa27.87■■■□□ 2.05
SCRIB-204ENST00000525051 HECW2Q9P2P5 1572 aa27.85■■■□□ 2.05
SCRIB-204ENST00000525051 ZFYVE16Q7Z3T8 1539 aa27.85■■■□□ 2.05
SCRIB-204ENST00000525051 MAGI2Q86UL8 1455 aa27.84■■■□□ 2.05
SCRIB-204ENST00000525051 ARHGEF40Q8TER5 1519 aa27.84■■■□□ 2.05
SCRIB-204ENST00000525051 KIDINS220Q9ULH0 1771 aa27.83■■■□□ 2.05
SCRIB-204ENST00000525051 MLH3Q9UHC1 1453 aa27.82■■■□□ 2.04
SCRIB-204ENST00000525051 MYT1LQ9UL68 1186 aa27.81■■■□□ 2.04
SCRIB-204ENST00000525051 ARHGEF5Q12774 1597 aa27.81■■■□□ 2.04
SCRIB-204ENST00000525051 DNMT1P26358 1616 aaKnown RBP27.8■■■□□ 2.04
SCRIB-204ENST00000525051 GCC2Q8IWJ2 1684 aa27.79■■■□□ 2.04
SCRIB-204ENST00000525051 CCDC141Q6ZP82 1450 aa27.79■■■□□ 2.04
SCRIB-204ENST00000525051 SPAG9O60271 1321 aaKnown RBP27.79■■■□□ 2.04
SCRIB-204ENST00000525051 ABCA6Q8N139 1617 aa27.78■■■□□ 2.04
SCRIB-204ENST00000525051 SIGLEC1Q9BZZ2 1709 aa27.78■■■□□ 2.04
SCRIB-204ENST00000525051 INO80Q9ULG1 1556 aaPredicted RBP27.77■■■□□ 2.04
SCRIB-204ENST00000525051 DIP2CQ9Y2E4 1556 aa27.76■■■□□ 2.03
SCRIB-204ENST00000525051 ATP7AQ04656 1500 aa27.75■■■□□ 2.03
SCRIB-204ENST00000525051 DAPK1P53355 1430 aa27.75■■■□□ 2.03
SCRIB-204ENST00000525051 RSPH4AQ5TD94 716 aa27.75■■■□□ 2.03
SCRIB-204ENST00000525051 ABCC5O15440 1437 aa27.74■■■□□ 2.03
SCRIB-204ENST00000525051 ATP10AO60312 1499 aa27.73■■■□□ 2.03
SCRIB-204ENST00000525051 ROCK1Q13464 1354 aa27.71■■■□□ 2.03
SCRIB-204ENST00000525051 CROCC2H7BZ55 1655 aa27.7■■■□□ 2.02
SCRIB-204ENST00000525051 TSPY4P0CV99 314 aa27.68■■■□□ 2.02
SCRIB-204ENST00000525051 TSPY10P0CW01 314 aa27.68■■■□□ 2.02
SCRIB-204ENST00000525051 RTEL1-TNFRSF6BF6WH68 1400 aa27.67■■■□□ 2.02
SCRIB-204ENST00000525051 C9orf84Q5VXU9 1444 aa27.67■■■□□ 2.02
SCRIB-204ENST00000525051 MAST1Q9Y2H9 1570 aa27.66■■■□□ 2.02
SCRIB-204ENST00000525051 ADGBQ8N7X0 1667 aa27.64■■■□□ 2.02
SCRIB-204ENST00000525051 ARID4BQ4LE39 1312 aaPredicted RBP27.64■■■□□ 2.02
SCRIB-204ENST00000525051 ZNF316A6NFI3 1004 aaPredicted RBP27.63■■■□□ 2.01
SCRIB-204ENST00000525051 CHIC2Q9UKJ5 165 aa27.63■■■□□ 2.01
SCRIB-204ENST00000525051 REREQ9P2R6 1566 aa27.62■■■□□ 2.01
SCRIB-204ENST00000525051 RRP7BPQ9NSQ0 103 aa27.62■■■□□ 2.01
SCRIB-204ENST00000525051 KDM4FA0A1W2PPD8 638 aa27.61■■■□□ 2.01
SCRIB-204ENST00000525051 SHANK2Q9UPX8 1470 aa27.6■■■□□ 2.01
SCRIB-204ENST00000525051 BCORL1Q5H9F3 1711 aa27.59■■■□□ 2.01
SCRIB-204ENST00000525051 ADGRL2O95490 1459 aa27.58■■■□□ 2.01
SCRIB-204ENST00000525051 A2MP01023 1474 aa27.58■■■□□ 2.01
SCRIB-204ENST00000525051 PLXNC1O60486 1568 aa27.57■■■□□ 2
SCRIB-204ENST00000525051 MLECQ14165 292 aa27.56■■■□□ 2
SCRIB-204ENST00000525051 AGLP35573 1532 aa27.53■■■□□ 2
SCRIB-204ENST00000525051 TIMELESSQ9UNS1 1208 aa27.52■■■□□ 2
SCRIB-204ENST00000525051 ADAMTSL3P82987 1691 aa27.52■■■□□ 2
SCRIB-204ENST00000525051 DHX29Q7Z478 1369 aaKnown RBP27.52■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms