RNA–Protein interactions for RNA: ENST00000525051.5

SCRIB-204, Transcript of scribbled planar cell polarity protein, humanhuman

TSL 1 (best)

Gene SCRIB, Length 1,685 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRIB-204ENST00000525051 NISCHQ9Y2I1 1504 aa43.36■■■■■ 4.53
SCRIB-204ENST00000525051 CCDC180Q9P1Z9 1646 aa38.4■■■■□ 3.74
SCRIB-204ENST00000525051 ABCC9O60706 1549 aa37.38■■■■□ 3.57
SCRIB-204ENST00000525051 DCAF8L2P0C7V8 631 aa36.18■■■■□ 3.38
SCRIB-204ENST00000525051 ZCCHC6Q5VYS8 1495 aaKnown RBP36.17■■■■□ 3.38
SCRIB-204ENST00000525051 NACADO15069 1562 aa36.02■■■■□ 3.36
SCRIB-204ENST00000525051 RB1CC1Q8TDY2 1594 aa36■■■■□ 3.35
SCRIB-204ENST00000525051 MYO15BQ96JP2 1530 aa35.84■■■■□ 3.33
SCRIB-204ENST00000525051 DCAF1Q9Y4B6 1507 aa35.82■■■■□ 3.33
SCRIB-204ENST00000525051 UNC13AQ9UPW8 1703 aa35.34■■■■□ 3.25
SCRIB-204ENST00000525051 SCRIBQ14160 1630 aa35.14■■■■□ 3.22
SCRIB-204ENST00000525051 PABPN1Q86U42 306 aaKnown RBP eCLIP35.01■■■■□ 3.194e-7■■□□□ 14.5
SCRIB-204ENST00000525051 BICRAQ9NZM4 1560 aa34.99■■■■□ 3.19
SCRIB-204ENST00000525051 SHROOM4Q9ULL8 1493 aa34.53■■■■□ 3.12
SCRIB-204ENST00000525051 DNAJC5BQ9UF47 199 aa34.13■■■■□ 3.05
SCRIB-204ENST00000525051 EIF4G1Q04637 1599 aaKnown RBP34.01■■■■□ 3.03
SCRIB-204ENST00000525051 CC2D2AQ9P2K1 1620 aa33.82■■■■□ 3
SCRIB-204ENST00000525051 CECR2Q9BXF3 1484 aa33.81■■■■□ 3
SCRIB-204ENST00000525051 SMARCA4P51532 1647 aa33.6■■■□□ 2.97
SCRIB-204ENST00000525051 BAZ1AQ9NRL2 1556 aaPredicted RBP33.55■■■□□ 2.96
SCRIB-204ENST00000525051 MROH2BQ7Z745 1585 aa33.47■■■□□ 2.95
SCRIB-204ENST00000525051 SUPT5HO00267 1087 aaKnown RBP33.39■■■□□ 2.94
SCRIB-204ENST00000525051 ATAD2BQ9ULI0 1458 aa33.33■■■□□ 2.93
SCRIB-204ENST00000525051 SMARCA2P51531 1590 aa33.26■■■□□ 2.92
SCRIB-204ENST00000525051 NCAPD3P42695 1498 aa33.25■■■□□ 2.91
SCRIB-204ENST00000525051 PEG3Q9GZU2 1588 aa33.23■■■□□ 2.91
SCRIB-204ENST00000525051 RSF1Q96T23 1441 aaPredicted RBP33.16■■■□□ 2.9
SCRIB-204ENST00000525051 WIZO95785 1651 aa33.16■■■□□ 2.9
SCRIB-204ENST00000525051 HMGXB3Q12766 1538 aa33.09■■■□□ 2.89
SCRIB-204ENST00000525051 BAZ1BQ9UIG0 1483 aaKnown RBP33.06■■■□□ 2.88
SCRIB-204ENST00000525051 TOP2AP11388 1531 aaKnown RBP32.73■■■□□ 2.83
SCRIB-204ENST00000525051 NESP48681 1621 aa32.47■■■□□ 2.79
SCRIB-204ENST00000525051 CCDC88BA6NC98 1476 aa32.39■■■□□ 2.77
SCRIB-204ENST00000525051 LAMC3Q9Y6N6 1575 aa32.32■■■□□ 2.76
SCRIB-204ENST00000525051 CADPSQ9ULU8 1353 aa32.3■■■□□ 2.76
SCRIB-204ENST00000525051 CHIC1Q5VXU3 224 aa32.28■■■□□ 2.76
SCRIB-204ENST00000525051 CFTRP13569 1480 aa32.17■■■□□ 2.74
SCRIB-204ENST00000525051 ERCC6Q03468 1493 aa32.14■■■□□ 2.73
SCRIB-204ENST00000525051 KIF21AQ7Z4S6 1674 aa32.09■■■□□ 2.73
SCRIB-204ENST00000525051 PDS5BQ9NTI5 1447 aa32.07■■■□□ 2.72
SCRIB-204ENST00000525051 PRDM2Q13029 1718 aa31.99■■■□□ 2.71
SCRIB-204ENST00000525051 FANCD2Q9BXW9 1451 aa31.95■■■□□ 2.7
SCRIB-204ENST00000525051 THOC2Q8NI27 1593 aaKnown RBP31.86■■■□□ 2.69
SCRIB-204ENST00000525051 CEP164Q9UPV0 1460 aa31.86■■■□□ 2.69
SCRIB-204ENST00000525051 MRC2Q9UBG0 1479 aa31.75■■■□□ 2.67
SCRIB-204ENST00000525051 CUX2O14529 1486 aa31.66■■■□□ 2.66
SCRIB-204ENST00000525051 WDR62O43379 1518 aa31.65■■■□□ 2.66
SCRIB-204ENST00000525051 URB2Q14146 1524 aaKnown RBP31.64■■■□□ 2.66
SCRIB-204ENST00000525051 TOPBP1Q92547 1522 aa31.48■■■□□ 2.63
SCRIB-204ENST00000525051 DNMBPQ6XZF7 1577 aa31.44■■■□□ 2.62
SCRIB-204ENST00000525051 ABCC8Q09428 1581 aa31.41■■■□□ 2.62
SCRIB-204ENST00000525051 TRIM41Q8WV44 630 aa31.37■■■□□ 2.61
SCRIB-204ENST00000525051 CUX1P39880 1505 aa31.37■■■□□ 2.61
SCRIB-204ENST00000525051 POLA1P09884 1462 aaPredicted RBP31.23■■■□□ 2.59
SCRIB-204ENST00000525051 WRNQ14191 1432 aaPredicted RBP eCLIP31.23■■■□□ 2.59
SCRIB-204ENST00000525051 SYNJ1O43426 1573 aa31.2■■■□□ 2.59
SCRIB-204ENST00000525051 FGD5Q6ZNL6 1462 aa31.2■■■□□ 2.59
SCRIB-204ENST00000525051 IFT140Q96RY7 1462 aa31.16■■■□□ 2.58
SCRIB-204ENST00000525051 TOP2BQ02880 1626 aa31.15■■■□□ 2.58
SCRIB-204ENST00000525051 BIVM-ERCC5R4GMW8 1640 aa31.15■■■□□ 2.58
SCRIB-204ENST00000525051 TARBP1Q13395 1621 aaKnown RBP31.14■■■□□ 2.58
SCRIB-204ENST00000525051 RAD54L2Q9Y4B4 1467 aa31.14■■■□□ 2.57
SCRIB-204ENST00000525051 ZNF608Q9ULD9 1512 aaPredicted RBP31.09■■■□□ 2.57
SCRIB-204ENST00000525051 SOGA1O94964 1423 aa31.09■■■□□ 2.57
SCRIB-204ENST00000525051 LOC105371045A0A1W2PR82 267 aa31.02■■■□□ 2.56
SCRIB-204ENST00000525051 EIF4G3O43432 1585 aaKnown RBP30.96■■■□□ 2.55
SCRIB-204ENST00000525051 WDR97A6NE52 1622 aa30.96■■■□□ 2.55
SCRIB-204ENST00000525051 AQRO60306 1485 aaKnown RBP eCLIP30.94■■■□□ 2.542e-7■■□□□ 12.8
SCRIB-204ENST00000525051 TDRD9Q8NDG6 1382 aaKnown RBP30.93■■■□□ 2.54
SCRIB-204ENST00000525051 ABCA10Q8WWZ4 1543 aa30.87■■■□□ 2.53
SCRIB-204ENST00000525051 FAM9AQ8IZU1 332 aaPredicted RBP30.78■■■□□ 2.52
SCRIB-204ENST00000525051 ABCA5Q8WWZ7 1642 aa30.76■■■□□ 2.52
SCRIB-204ENST00000525051 GAPVD1Q14C86 1478 aa30.74■■■□□ 2.51
SCRIB-204ENST00000525051 PBRM1Q86U86 1689 aa30.71■■■□□ 2.51
SCRIB-204ENST00000525051 GRIN2BQ13224 1484 aa30.67■■■□□ 2.5
SCRIB-204ENST00000525051 SNAPC4Q5SXM2 1469 aa30.63■■■□□ 2.49
SCRIB-204ENST00000525051 EEA1Q15075 1411 aa30.62■■■□□ 2.49
SCRIB-204ENST00000525051 CHD1O14646 1710 aa30.56■■■□□ 2.48
SCRIB-204ENST00000525051 MAGI1Q96QZ7 1491 aaPredicted RBP30.54■■■□□ 2.48
SCRIB-204ENST00000525051 KIF27Q86VH2 1401 aa30.53■■■□□ 2.48
SCRIB-204ENST00000525051 RUSC2Q8N2Y8 1516 aa30.52■■■□□ 2.48
SCRIB-204ENST00000525051 FBLN2P98095 1184 aa30.51■■■□□ 2.47
SCRIB-204ENST00000525051 ERICH3Q5RHP9 1530 aa30.5■■■□□ 2.47
SCRIB-204ENST00000525051 SYNJ2O15056 1496 aa30.44■■■□□ 2.46
SCRIB-204ENST00000525051 ADAMTS12P58397 1594 aa30.44■■■□□ 2.46
SCRIB-204ENST00000525051 OSCARQ8IYS5 282 aa30.44■■■□□ 2.46
SCRIB-204ENST00000525051 CHMP7Q8WUX9 453 aaPredicted RBP30.42■■■□□ 2.46
SCRIB-204ENST00000525051 DNAJC5Q9H3Z4 198 aa30.42■■■□□ 2.46
SCRIB-204ENST00000525051 IGF1RP08069 1367 aa30.42■■■□□ 2.46
SCRIB-204ENST00000525051 CSRNP3Q8WYN3 585 aa30.39■■■□□ 2.46
SCRIB-204ENST00000525051 FHAD1B1AJZ9 1412 aa30.36■■■□□ 2.45
SCRIB-204ENST00000525051 GRIN2AQ12879 1464 aa30.31■■■□□ 2.44
SCRIB-204ENST00000525051 CUL7Q14999 1698 aa30.29■■■□□ 2.44
SCRIB-204ENST00000525051 EHMT2Q96KQ7 1210 aa30.28■■■□□ 2.44
SCRIB-204ENST00000525051 KIF21BO75037 1637 aa30.24■■■□□ 2.43
SCRIB-204ENST00000525051 CARMIL1Q5VZK9 1371 aa30.22■■■□□ 2.43
SCRIB-204ENST00000525051 TNIKQ9UKE5 1360 aa30.22■■■□□ 2.43
SCRIB-204ENST00000525051 GOLGA3Q08378 1498 aa30.2■■■□□ 2.43
SCRIB-204ENST00000525051 CEP170Q5SW79 1584 aa30.18■■■□□ 2.42
SCRIB-204ENST00000525051 CLASP1Q7Z460 1538 aa30.17■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms