RNA–Protein interactions for RNA: ENST00000524877.5

BEST1-203, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 5,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-203ENST00000524877 HNRNPUQ00839 825 aaKnown RBP eCLIP22.62■■□□□ 1.21
BEST1-203ENST00000524877 NUDCQ9Y266 331 aa22.62■■□□□ 1.21
BEST1-203ENST00000524877 POLA1P09884 1462 aaPredicted RBP22.61■■□□□ 1.21
BEST1-203ENST00000524877 SIN3AQ96ST3 1273 aa22.59■■□□□ 1.21
BEST1-203ENST00000524877 ARXQ96QS3 562 aa22.58■■□□□ 1.2
BEST1-203ENST00000524877 SYNJ2O15056 1496 aa22.57■■□□□ 1.2
BEST1-203ENST00000524877 HDGFL2Q7Z4V5 671 aaPredicted RBP22.56■■□□□ 1.2
BEST1-203ENST00000524877 MAPK8IP3Q9UPT6 1336 aa22.55■■□□□ 1.2
BEST1-203ENST00000524877 MPHOSPH9Q99550 1183 aa22.55■■□□□ 1.2
BEST1-203ENST00000524877 PAK3O75914 559 aaPredicted RBP22.54■■□□□ 1.2
BEST1-203ENST00000524877 EIF3AQ14152 1382 aaKnown RBP22.51■■□□□ 1.19
BEST1-203ENST00000524877 UNC13AQ9UPW8 1703 aa22.51■■□□□ 1.19
BEST1-203ENST00000524877 PNNQ9H307 717 aaKnown RBP22.51■■□□□ 1.19
BEST1-203ENST00000524877 CUX1P39880 1505 aa22.5■■□□□ 1.19
BEST1-203ENST00000524877 TOP2BQ02880 1626 aa22.49■■□□□ 1.19
BEST1-203ENST00000524877 NPHP1O15259 732 aa22.49■■□□□ 1.19
BEST1-203ENST00000524877 MYH16Q9H6N6 1097 aa22.49■■□□□ 1.19
BEST1-203ENST00000524877 FOXD1Q16676 465 aa22.48■■□□□ 1.19
BEST1-203ENST00000524877 SOX12O15370 315 aa22.48■■□□□ 1.19
BEST1-203ENST00000524877 SYNJ1O43426 1573 aa22.47■■□□□ 1.19
BEST1-203ENST00000524877 TNNT2P45379 298 aaPredicted RBP22.47■■□□□ 1.19
BEST1-203ENST00000524877 TIMELESSQ9UNS1 1208 aa22.46■■□□□ 1.19
BEST1-203ENST00000524877 NUTM2DQ5VT03 806 aaPredicted RBP22.46■■□□□ 1.19
BEST1-203ENST00000524877 UACAQ9BZF9 1416 aa22.45■■□□□ 1.19
BEST1-203ENST00000524877 ROCK2O75116 1388 aaKnown RBP22.45■■□□□ 1.18
BEST1-203ENST00000524877 ARHGAP5Q13017 1502 aa22.44■■□□□ 1.18
BEST1-203ENST00000524877 CSB-PGBD3P0DP91 1061 aa22.44■■□□□ 1.18
BEST1-203ENST00000524877 CCDC9Q9Y3X0 531 aaKnown RBP22.43■■□□□ 1.18
BEST1-203ENST00000524877 ANP32EQ9BTT0 268 aa22.41■■□□□ 1.18
BEST1-203ENST00000524877 U2SURPO15042 1029 aaKnown RBP22.4■■□□□ 1.18
BEST1-203ENST00000524877 CC2D1BQ5T0F9 858 aaKnown RBP22.39■■□□□ 1.18
BEST1-203ENST00000524877 RAB3GAP2Q9H2M9 1393 aa22.39■■□□□ 1.17
BEST1-203ENST00000524877 MORC1Q86VD1 984 aa22.39■■□□□ 1.17
BEST1-203ENST00000524877 MYOM3Q5VTT5 1437 aa22.38■■□□□ 1.17
BEST1-203ENST00000524877 ERICH3Q5RHP9 1530 aa22.37■■□□□ 1.17
BEST1-203ENST00000524877 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.37■■□□□ 1.17
BEST1-203ENST00000524877 ANP32AP39687 249 aaKnown RBP22.36■■□□□ 1.17
BEST1-203ENST00000524877 NGDNQ8NEJ9 315 aaKnown RBP22.36■■□□□ 1.17
BEST1-203ENST00000524877 LAS1LQ9Y4W2 734 aaKnown RBP22.36■■□□□ 1.17
BEST1-203ENST00000524877 VGFO15240 615 aaPredicted RBP22.36■■□□□ 1.17
BEST1-203ENST00000524877 MAGI1Q96QZ7 1491 aaPredicted RBP22.36■■□□□ 1.17
BEST1-203ENST00000524877 CCDC144AA2RUR9 1427 aa22.35■■□□□ 1.17
BEST1-203ENST00000524877 ABCA10Q8WWZ4 1543 aa22.34■■□□□ 1.17
BEST1-203ENST00000524877 CASKIN1Q8WXD9 1431 aa22.34■■□□□ 1.17
BEST1-203ENST00000524877 EFCAB5A4FU69 1503 aa22.33■■□□□ 1.17
BEST1-203ENST00000524877 TERF2IPQ9NYB0 399 aa22.31■■□□□ 1.16
BEST1-203ENST00000524877 KIAA0586Q9BVV6 1533 aa22.3■■□□□ 1.16
BEST1-203ENST00000524877 PEG3Q9GZU2 1588 aa22.3■■□□□ 1.16
BEST1-203ENST00000524877 KIF21BO75037 1637 aa22.3■■□□□ 1.16
BEST1-203ENST00000524877 NEUROD2Q15784 382 aa22.28■■□□□ 1.16
BEST1-203ENST00000524877 POGZQ7Z3K3 1410 aa22.27■■□□□ 1.16
BEST1-203ENST00000524877 UPF2Q9HAU5 1272 aaKnown RBP22.27■■□□□ 1.16
BEST1-203ENST00000524877 FYCO1Q9BQS8 1478 aa22.26■■□□□ 1.15
BEST1-203ENST00000524877 PLEKHH2Q8IVE3 1493 aa22.26■■□□□ 1.15
BEST1-203ENST00000524877 RTF1Q92541 710 aaKnown RBP22.26■■□□□ 1.15
BEST1-203ENST00000524877 MEX3CQ5U5Q3 659 aaKnown RBP22.24■■□□□ 1.15
BEST1-203ENST00000524877 HECW1Q76N89 1606 aa22.24■■□□□ 1.15
BEST1-203ENST00000524877 KIF15Q9NS87 1388 aa22.23■■□□□ 1.15
BEST1-203ENST00000524877 URB2Q14146 1524 aaKnown RBP22.23■■□□□ 1.15
BEST1-203ENST00000524877 CUL7Q14999 1698 aa22.23■■□□□ 1.15
BEST1-203ENST00000524877 GRIN2AQ12879 1464 aa22.21■■□□□ 1.15
BEST1-203ENST00000524877 HSPA5P11021 654 aaKnown RBP22.2■■□□□ 1.15
BEST1-203ENST00000524877 IQGAP2Q13576 1575 aa22.2■■□□□ 1.14
BEST1-203ENST00000524877 TRAK1Q9UPV9 953 aa22.19■■□□□ 1.14
BEST1-203ENST00000524877 NUTM2FA1L443 756 aa22.18■■□□□ 1.14
BEST1-203ENST00000524877 NCOA2Q15596 1464 aa22.17■■□□□ 1.14
BEST1-203ENST00000524877 AFAP1Q8N556 730 aa22.17■■□□□ 1.14
BEST1-203ENST00000524877 FGD6Q6ZV73 1430 aa22.16■■□□□ 1.14
BEST1-203ENST00000524877 FTSJ3Q8IY81 847 aaKnown RBP22.16■■□□□ 1.14
BEST1-203ENST00000524877 ATF3P18847 181 aa22.16■■□□□ 1.14
BEST1-203ENST00000524877 KTN1Q86UP2 1357 aaKnown RBP22.15■■□□□ 1.14
BEST1-203ENST00000524877 ZNF644Q9H582 1327 aaPredicted RBP22.15■■□□□ 1.14
BEST1-203ENST00000524877 HSP90AA1P07900 732 aaKnown RBP22.15■■□□□ 1.14
BEST1-203ENST00000524877 LRRC9Q6ZRR7 1453 aa22.13■■□□□ 1.13
BEST1-203ENST00000524877 NBR1Q14596 966 aa22.13■■□□□ 1.13
BEST1-203ENST00000524877 FKBP8Q14318 412 aa22.13■■□□□ 1.13
BEST1-203ENST00000524877 EHBP1L1Q8N3D4 1523 aa22.12■■□□□ 1.13
BEST1-203ENST00000524877 AMPHP49418 695 aa22.12■■□□□ 1.13
BEST1-203ENST00000524877 CCDC136Q96JN2 1154 aa22.12■■□□□ 1.13
BEST1-203ENST00000524877 ANP32BQ92688 251 aaKnown RBP22.12■■□□□ 1.13
BEST1-203ENST00000524877 TROQ12816 1431 aaPredicted RBP22.11■■□□□ 1.13
BEST1-203ENST00000524877 EVA1CP58658 441 aa22.11■■□□□ 1.13
BEST1-203ENST00000524877 L3MBTL2Q969R5 705 aa22.1■■□□□ 1.13
BEST1-203ENST00000524877 CHMP4BQ9H444 224 aaKnown RBP22.1■■□□□ 1.13
BEST1-203ENST00000524877 PRXQ9BXM0 1461 aa22.1■■□□□ 1.13
BEST1-203ENST00000524877 EVC2Q86UK5 1308 aa22.09■■□□□ 1.13
BEST1-203ENST00000524877 ZNF608Q9ULD9 1512 aaPredicted RBP22.08■■□□□ 1.12
BEST1-203ENST00000524877 CD109Q6YHK3 1445 aa22.07■■□□□ 1.12
BEST1-203ENST00000524877 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.07■■□□□ 1.12
BEST1-203ENST00000524877 THEMISQ8N1K5 641 aaPredicted RBP22.06■■□□□ 1.12
BEST1-203ENST00000524877 SCAPERQ9BY12 1400 aa22.06■■□□□ 1.12
BEST1-203ENST00000524877 ANKRD50Q9ULJ7 1429 aa22.06■■□□□ 1.12
BEST1-203ENST00000524877 CALD1Q05682 793 aaKnown RBP22.06■■□□□ 1.12
BEST1-203ENST00000524877 MS4A1P11836 297 aa22.05■■□□□ 1.12
BEST1-203ENST00000524877 MIER1Q8N108 512 aa22.05■■□□□ 1.12
BEST1-203ENST00000524877 PSME1Q06323 249 aa22.04■■□□□ 1.12
BEST1-203ENST00000524877 RAPGEF3O95398 923 aa22.04■■□□□ 1.12
BEST1-203ENST00000524877 GOLGA2Q08379 1002 aa22.03■■□□□ 1.12
BEST1-203ENST00000524877 TMX4Q9H1E5 349 aaPredicted RBP22.02■■□□□ 1.12
BEST1-203ENST00000524877 MINK1Q8N4C8 1332 aaPredicted RBP22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms