RNA–Protein interactions for RNA: ENST00000524877.5

BEST1-203, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 5,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-203ENST00000524877 NISCHQ9Y2I1 1504 aa31.19■■■□□ 2.58
BEST1-203ENST00000524877 DCAF8L2P0C7V8 631 aa31.16■■■□□ 2.58
BEST1-203ENST00000524877 SHROOM4Q9ULL8 1493 aa28.7■■■□□ 2.18
BEST1-203ENST00000524877 SUPT5HO00267 1087 aaKnown RBP28.62■■■□□ 2.17
BEST1-203ENST00000524877 FAM9AQ8IZU1 332 aaPredicted RBP27.58■■■□□ 2.01
BEST1-203ENST00000524877 ABCC9O60706 1549 aa27.41■■□□□ 1.98
BEST1-203ENST00000524877 EHMT2Q96KQ7 1210 aa27.38■■□□□ 1.97
BEST1-203ENST00000524877 APLP2Q06481 763 aa27.16■■□□□ 1.94
BEST1-203ENST00000524877 MYT1Q01538 1121 aa27.02■■□□□ 1.92
BEST1-203ENST00000524877 PELP1Q8IZL8 1130 aaKnown RBP26.83■■□□□ 1.89
BEST1-203ENST00000524877 PABPN1Q86U42 306 aaKnown RBP eCLIP26.81■■□□□ 1.88
BEST1-203ENST00000524877 TRIM41Q8WV44 630 aa26.77■■□□□ 1.88
BEST1-203ENST00000524877 RANGAP1P46060 587 aaPredicted RBP26.66■■□□□ 1.86
BEST1-203ENST00000524877 ATP1B4Q9UN42 357 aaPredicted RBP26.59■■□□□ 1.85
BEST1-203ENST00000524877 UBTFP17480 764 aaKnown RBP26.43■■□□□ 1.82
BEST1-203ENST00000524877 CCDC180Q9P1Z9 1646 aa26.33■■□□□ 1.81
BEST1-203ENST00000524877 TTBK1Q5TCY1 1321 aaPredicted RBP26.28■■□□□ 1.8
BEST1-203ENST00000524877 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.01■■□□□ 1.75
BEST1-203ENST00000524877 HNRNPUL2Q1KMD3 747 aaKnown RBP26.01■■□□□ 1.75
BEST1-203ENST00000524877 MYT1LQ9UL68 1186 aa25.93■■□□□ 1.74
BEST1-203ENST00000524877 SCRIBQ14160 1630 aa25.92■■□□□ 1.74
BEST1-203ENST00000524877 RB1CC1Q8TDY2 1594 aa25.91■■□□□ 1.74
BEST1-203ENST00000524877 ZCCHC6Q5VYS8 1495 aaKnown RBP25.77■■□□□ 1.72
BEST1-203ENST00000524877 FBLN2P98095 1184 aa25.66■■□□□ 1.7
BEST1-203ENST00000524877 NACADO15069 1562 aa25.57■■□□□ 1.68
BEST1-203ENST00000524877 PCGF6Q9BYE7 350 aa25.52■■□□□ 1.68
BEST1-203ENST00000524877 ERICH6Q7L0X2 663 aa25.37■■□□□ 1.65
BEST1-203ENST00000524877 CCER1Q8TC90 406 aaPredicted RBP25.36■■□□□ 1.65
BEST1-203ENST00000524877 CHIC1Q5VXU3 224 aa25.3■■□□□ 1.64
BEST1-203ENST00000524877 ITGAEP38570 1179 aa25.25■■□□□ 1.63
BEST1-203ENST00000524877 PPARGC1BQ86YN6 1023 aaKnown RBP25.25■■□□□ 1.63
BEST1-203ENST00000524877 ZEB1P37275 1124 aaPredicted RBP25.13■■□□□ 1.61
BEST1-203ENST00000524877 CENPBP07199 599 aaPredicted RBP25.05■■□□□ 1.6
BEST1-203ENST00000524877 LOC105371045A0A1W2PR82 267 aa25.03■■□□□ 1.6
BEST1-203ENST00000524877 NPM1P06748 294 aaKnown RBP eCLIP24.97■■□□□ 1.59
BEST1-203ENST00000524877 FAM50AQ14320 339 aaKnown RBP24.93■■□□□ 1.58
BEST1-203ENST00000524877 BAZ1BQ9UIG0 1483 aaKnown RBP24.92■■□□□ 1.58
BEST1-203ENST00000524877 ERCC6Q03468 1493 aa24.91■■□□□ 1.58
BEST1-203ENST00000524877 DCAF1Q9Y4B6 1507 aa24.84■■□□□ 1.57
BEST1-203ENST00000524877 P3H3Q8IVL6 736 aa24.83■■□□□ 1.57
BEST1-203ENST00000524877 TRIM26Q12899 539 aaPredicted RBP24.82■■□□□ 1.56
BEST1-203ENST00000524877 CHMP7Q8WUX9 453 aaPredicted RBP24.81■■□□□ 1.56
BEST1-203ENST00000524877 CSRNP3Q8WYN3 585 aa24.81■■□□□ 1.56
BEST1-203ENST00000524877 CDK11AQ9UQ88 783 aaPredicted RBP24.81■■□□□ 1.56
BEST1-203ENST00000524877 ARID3CA6NKF2 412 aa24.79■■□□□ 1.56
BEST1-203ENST00000524877 TRIM52Q96A61 297 aa24.75■■□□□ 1.55
BEST1-203ENST00000524877 POLR3GLQ9BT43 218 aa24.71■■□□□ 1.55
BEST1-203ENST00000524877 ESF1Q9H501 851 aaKnown RBP24.66■■□□□ 1.54
BEST1-203ENST00000524877 BAZ1AQ9NRL2 1556 aaPredicted RBP24.64■■□□□ 1.53
BEST1-203ENST00000524877 SLC4A1APQ9BWU0 796 aaKnown RBP24.61■■□□□ 1.53
BEST1-203ENST00000524877 ZNF777Q9ULD5 760 aaPredicted RBP24.59■■□□□ 1.53
BEST1-203ENST00000524877 RSF1Q96T23 1441 aaPredicted RBP24.55■■□□□ 1.52
BEST1-203ENST00000524877 BCANQ96GW7 911 aa24.52■■□□□ 1.52
BEST1-203ENST00000524877 SMARCA2P51531 1590 aa24.4■■□□□ 1.5
BEST1-203ENST00000524877 MYO15BQ96JP2 1530 aa24.38■■□□□ 1.49
BEST1-203ENST00000524877 PLPPR3Q6T4P5 718 aa24.31■■□□□ 1.48
BEST1-203ENST00000524877 PDS5BQ9NTI5 1447 aa24.3■■□□□ 1.48
BEST1-203ENST00000524877 CECR2Q9BXF3 1484 aa24.3■■□□□ 1.48
BEST1-203ENST00000524877 YTHDC1Q96MU7 727 aaKnown RBP24.28■■□□□ 1.48
BEST1-203ENST00000524877 WRNQ14191 1432 aaPredicted RBP eCLIP24.28■■□□□ 1.48
BEST1-203ENST00000524877 STAG3Q9UJ98 1225 aa24.27■■□□□ 1.48
BEST1-203ENST00000524877 ZNF326Q5BKZ1 582 aaKnown RBP24.23■■□□□ 1.47
BEST1-203ENST00000524877 NEUROD1Q13562 356 aa24.23■■□□□ 1.47
BEST1-203ENST00000524877 CNGB1Q14028 1251 aaPredicted RBP24.21■■□□□ 1.47
BEST1-203ENST00000524877 KIF27Q86VH2 1401 aa24.2■■□□□ 1.46
BEST1-203ENST00000524877 NEFLP07196 543 aa24.2■■□□□ 1.46
BEST1-203ENST00000524877 KCNH8Q96L42 1107 aa24.12■■□□□ 1.45
BEST1-203ENST00000524877 EEA1Q15075 1411 aa24.1■■□□□ 1.45
BEST1-203ENST00000524877 PLEKHD1A6NEE1 506 aa24.09■■□□□ 1.45
BEST1-203ENST00000524877 CHGAP10645 457 aaKnown RBP24.09■■□□□ 1.45
BEST1-203ENST00000524877 MTUS2Q5JR59 1369 aa24.07■■□□□ 1.44
BEST1-203ENST00000524877 TSPY4P0CV99 314 aa24.06■■□□□ 1.44
BEST1-203ENST00000524877 TSPY10P0CW01 314 aa24.06■■□□□ 1.44
BEST1-203ENST00000524877 MROH2BQ7Z745 1585 aa24.03■■□□□ 1.44
BEST1-203ENST00000524877 TRHP20396 242 aaPredicted RBP24.02■■□□□ 1.44
BEST1-203ENST00000524877 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.96■■□□□ 1.43
BEST1-203ENST00000524877 GOLGA3Q08378 1498 aa23.96■■□□□ 1.43
BEST1-203ENST00000524877 ARID4BQ4LE39 1312 aaPredicted RBP23.95■■□□□ 1.42
BEST1-203ENST00000524877 CLIP1P30622 1438 aa23.93■■□□□ 1.42
BEST1-203ENST00000524877 CUX2O14529 1486 aa23.92■■□□□ 1.42
BEST1-203ENST00000524877 EIF4G1Q04637 1599 aaKnown RBP23.92■■□□□ 1.42
BEST1-203ENST00000524877 CCDC88BA6NC98 1476 aa23.91■■□□□ 1.42
BEST1-203ENST00000524877 CADPSQ9ULU8 1353 aa23.89■■□□□ 1.42
BEST1-203ENST00000524877 CEP164Q9UPV0 1460 aa23.88■■□□□ 1.41
BEST1-203ENST00000524877 CHIC2Q9UKJ5 165 aa23.87■■□□□ 1.41
BEST1-203ENST00000524877 TOP2AP11388 1531 aaKnown RBP23.87■■□□□ 1.41
BEST1-203ENST00000524877 ATAD2BQ9ULI0 1458 aa23.86■■□□□ 1.41
BEST1-203ENST00000524877 SOGA1O94964 1423 aa23.85■■□□□ 1.41
BEST1-203ENST00000524877 SMARCA4P51532 1647 aa23.81■■□□□ 1.4
BEST1-203ENST00000524877 CARMIL1Q5VZK9 1371 aa23.79■■□□□ 1.4
BEST1-203ENST00000524877 HRCP23327 699 aa23.77■■□□□ 1.4
BEST1-203ENST00000524877 NEFMP07197 916 aa23.76■■□□□ 1.39
BEST1-203ENST00000524877 CARMIL2Q6F5E8 1435 aa23.74■■□□□ 1.39
BEST1-203ENST00000524877 WIZO95785 1651 aa23.73■■□□□ 1.39
BEST1-203ENST00000524877 CFDP1Q9UEE9 299 aaPredicted RBP23.71■■□□□ 1.39
BEST1-203ENST00000524877 SLC24A1O60721 1099 aa23.7■■□□□ 1.38
BEST1-203ENST00000524877 PPP1R15AO75807 674 aaPredicted RBP23.69■■□□□ 1.38
BEST1-203ENST00000524877 TDRD9Q8NDG6 1382 aaKnown RBP23.67■■□□□ 1.38
BEST1-203ENST00000524877 RTL5Q5HYW3 569 aaPredicted RBP23.67■■□□□ 1.38
BEST1-203ENST00000524877 TONSLQ96HA7 1378 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms