RNA–Protein interactions for RNA: ENST00000524203.1

PCM1-221, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-221ENST00000524203 CTTNBP2Q8WZ74 1663 aa11.35□□□□□ -0.59
PCM1-221ENST00000524203 ZNF335Q9H4Z2 1342 aaPredicted RBP11.35□□□□□ -0.59
PCM1-221ENST00000524203 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.34□□□□□ -0.59
PCM1-221ENST00000524203 HNRNPUL2Q1KMD3 747 aaKnown RBP11.34□□□□□ -0.59
PCM1-221ENST00000524203 HECW1Q76N89 1606 aa11.34□□□□□ -0.59
PCM1-221ENST00000524203 PHF23Q9BUL5 403 aaPredicted RBP11.32□□□□□ -0.6
PCM1-221ENST00000524203 SCAF1Q9H7N4 1312 aaKnown RBP11.32□□□□□ -0.6
PCM1-221ENST00000524203 NCOA1Q15788 1441 aa11.31□□□□□ -0.6
PCM1-221ENST00000524203 MAGI2Q86UL8 1455 aa11.31□□□□□ -0.6
PCM1-221ENST00000524203 PIP4K2BP78356 416 aa11.3□□□□□ -0.6
PCM1-221ENST00000524203 CFAP74Q9C0B2 1584 aa11.29□□□□□ -0.6
PCM1-221ENST00000524203 ATP10AO60312 1499 aa11.29□□□□□ -0.6
PCM1-221ENST00000524203 SETD1BQ9UPS6 1966 aaKnown RBP11.28□□□□□ -0.6
PCM1-221ENST00000524203 C9orf84Q5VXU9 1444 aa11.28□□□□□ -0.6
PCM1-221ENST00000524203 NCKAP5LQ9HCH0 1330 aa11.28□□□□□ -0.6
PCM1-221ENST00000524203 C3P01024 1663 aa11.27□□□□□ -0.6
PCM1-221ENST00000524203 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.26□□□□□ -0.61
PCM1-221ENST00000524203 CAMSAP1Q5T5Y3 1602 aa11.26□□□□□ -0.61
PCM1-221ENST00000524203 RAPGEF6Q8TEU7 1601 aa11.26□□□□□ -0.61
PCM1-221ENST00000524203 SCAPERQ9BY12 1400 aa11.26□□□□□ -0.61
PCM1-221ENST00000524203 FAM9AQ8IZU1 332 aaPredicted RBP11.25□□□□□ -0.61
PCM1-221ENST00000524203 TRAPPC8Q9Y2L5 1435 aa11.24□□□□□ -0.61
PCM1-221ENST00000524203 NUP153P49790 1475 aaKnown RBP11.23□□□□□ -0.61
PCM1-221ENST00000524203 SENP3Q9H4L4 574 aaPredicted RBP11.22□□□□□ -0.61
PCM1-221ENST00000524203 PLEKHD1A6NEE1 506 aa11.21□□□□□ -0.61
PCM1-221ENST00000524203 RGS17Q9UGC6 210 aaPredicted RBP11.2□□□□□ -0.62
PCM1-221ENST00000524203 TOM1O60784 492 aa11.18□□□□□ -0.62
PCM1-221ENST00000524203 ESF1Q9H501 851 aaKnown RBP11.18□□□□□ -0.62
PCM1-221ENST00000524203 MYT1LQ9UL68 1186 aa11.17□□□□□ -0.62
PCM1-221ENST00000524203 DIP2CQ9Y2E4 1556 aa11.16□□□□□ -0.62
PCM1-221ENST00000524203 AFAP1Q8N556 730 aa11.16□□□□□ -0.62
PCM1-221ENST00000524203 PLCH2O75038 1416 aa11.16□□□□□ -0.62
PCM1-221ENST00000524203 SAMD9Q5K651 1589 aa11.16□□□□□ -0.62
PCM1-221ENST00000524203 PPP6R1Q9UPN7 881 aa11.15□□□□□ -0.62
PCM1-221ENST00000524203 PKD2Q13563 968 aa11.14□□□□□ -0.63
PCM1-221ENST00000524203 ALKQ9UM73 1620 aa11.13□□□□□ -0.63
PCM1-221ENST00000524203 TCOF1Q13428 1488 aaKnown RBP11.13□□□□□ -0.63
PCM1-221ENST00000524203 ABCA6Q8N139 1617 aa11.13□□□□□ -0.63
PCM1-221ENST00000524203 PRXQ9BXM0 1461 aa11.12□□□□□ -0.63
PCM1-221ENST00000524203 RANGAP1P46060 587 aaPredicted RBP11.12□□□□□ -0.63
PCM1-221ENST00000524203 SUPT6HQ7KZ85 1726 aaKnown RBP11.12□□□□□ -0.63
PCM1-221ENST00000524203 PLA2R1Q13018 1463 aa11.12□□□□□ -0.63
PCM1-221ENST00000524203 ZNF518AQ6AHZ1 1483 aa11.12□□□□□ -0.63
PCM1-221ENST00000524203 KDM5CP41229 1560 aa11.11□□□□□ -0.63
PCM1-221ENST00000524203 AGLP35573 1532 aa11.11□□□□□ -0.63
PCM1-221ENST00000524203 EFCAB2Q5VUJ9 269 aa11.11□□□□□ -0.63
PCM1-221ENST00000524203 POTEAQ6S8J7 498 aa11.11□□□□□ -0.63
PCM1-221ENST00000524203 REREQ9P2R6 1566 aa11.11□□□□□ -0.63
PCM1-221ENST00000524203 NPATQ14207 1427 aa11.1□□□□□ -0.63
PCM1-221ENST00000524203 CNTLNQ9NXG0 1405 aa11.09□□□□□ -0.63
PCM1-221ENST00000524203 CDK13Q14004 1512 aaKnown RBP11.09□□□□□ -0.63
PCM1-221ENST00000524203 MYO3AQ8NEV4 1616 aa11.09□□□□□ -0.63
PCM1-221ENST00000524203 ZNF142P52746 1687 aaPredicted RBP11.09□□□□□ -0.63
PCM1-221ENST00000524203 SETD1AO15047 1707 aaKnown RBP11.09□□□□□ -0.63
PCM1-221ENST00000524203 CPS1P31327 1500 aa11.09□□□□□ -0.63
PCM1-221ENST00000524203 CEP170BQ9Y4F5 1589 aaPredicted RBP11.08□□□□□ -0.64
PCM1-221ENST00000524203 SHANK2Q9UPX8 1470 aa11.08□□□□□ -0.64
PCM1-221ENST00000524203 ZMYM3Q14202 1370 aa11.08□□□□□ -0.64
PCM1-221ENST00000524203 MYO5CQ9NQX4 1742 aa11.07□□□□□ -0.64
PCM1-221ENST00000524203 PTPRKQ15262 1439 aa11.07□□□□□ -0.64
PCM1-221ENST00000524203 MROH2AA6NES4 1674 aa11.06□□□□□ -0.64
PCM1-221ENST00000524203 MLH3Q9UHC1 1453 aa11.05□□□□□ -0.64
PCM1-221ENST00000524203 ARHGAP5Q13017 1502 aa11.04□□□□□ -0.64
PCM1-221ENST00000524203 NEURL4Q96JN8 1562 aa11.03□□□□□ -0.64
PCM1-221ENST00000524203 CLTCQ00610 1675 aaKnown RBP11.03□□□□□ -0.64
PCM1-221ENST00000524203 KIF14Q15058 1648 aa11.02□□□□□ -0.64
PCM1-221ENST00000524203 VWDEQ8N2E2 1590 aa11.02□□□□□ -0.65
PCM1-221ENST00000524203 DNMT1P26358 1616 aaKnown RBP11.01□□□□□ -0.65
PCM1-221ENST00000524203 POLR1AO95602 1720 aaPredicted RBP11.01□□□□□ -0.65
PCM1-221ENST00000524203 KIDINS220Q9ULH0 1771 aa11□□□□□ -0.65
PCM1-221ENST00000524203 A2ML1A8K2U0 1454 aa10.99□□□□□ -0.65
PCM1-221ENST00000524203 UPF1Q92900 1129 aaKnown RBP eCLIP10.98□□□□□ -0.65
PCM1-221ENST00000524203 SRCAPQ6ZRS2 3230 aa10.97□□□□□ -0.65
PCM1-221ENST00000524203 ATP1B4Q9UN42 357 aaPredicted RBP10.97□□□□□ -0.65
PCM1-221ENST00000524203 STRCP1A6NGW2 1772 aa10.96□□□□□ -0.65
PCM1-221ENST00000524203 CDC42BPBQ9Y5S2 1711 aa10.96□□□□□ -0.65
PCM1-221ENST00000524203 RNF17Q9BXT8 1623 aaKnown RBP10.96□□□□□ -0.65
PCM1-221ENST00000524203 ABCC1P33527 1531 aa10.96□□□□□ -0.65
PCM1-221ENST00000524203 LRRC7Q96NW7 1537 aa10.96□□□□□ -0.65
PCM1-221ENST00000524203 ITSN2Q9NZM3 1697 aa10.95□□□□□ -0.66
PCM1-221ENST00000524203 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.94□□□□□ -0.66
PCM1-221ENST00000524203 GGT6Q6P531 493 aa10.94□□□□□ -0.66
PCM1-221ENST00000524203 NPHP4O75161 1426 aaPredicted RBP10.92□□□□□ -0.66
PCM1-221ENST00000524203 ANKLE2Q86XL3 938 aa10.92□□□□□ -0.66
PCM1-221ENST00000524203 SAMD9LQ8IVG5 1584 aa10.91□□□□□ -0.66
PCM1-221ENST00000524203 FBXO31Q5XUX0 539 aaPredicted RBP10.91□□□□□ -0.66
PCM1-221ENST00000524203 TROQ12816 1431 aaPredicted RBP10.91□□□□□ -0.66
PCM1-221ENST00000524203 CDK11AQ9UQ88 783 aaPredicted RBP10.9□□□□□ -0.66
PCM1-221ENST00000524203 PREX2Q70Z35 1606 aa10.89□□□□□ -0.67
PCM1-221ENST00000524203 TRIM52Q96A61 297 aa10.89□□□□□ -0.67
PCM1-221ENST00000524203 SYNMO15061 1565 aa10.89□□□□□ -0.67
PCM1-221ENST00000524203 TNRQ92752 1358 aa10.89□□□□□ -0.67
PCM1-221ENST00000524203 IQGAP1P46940 1657 aa10.89□□□□□ -0.67
PCM1-221ENST00000524203 SPAG9O60271 1321 aaKnown RBP10.88□□□□□ -0.67
PCM1-221ENST00000524203 MED14O60244 1454 aa10.88□□□□□ -0.67
PCM1-221ENST00000524203 PLXNC1O60486 1568 aa10.88□□□□□ -0.67
PCM1-221ENST00000524203 CSRNP3Q8WYN3 585 aa10.88□□□□□ -0.67
PCM1-221ENST00000524203 A2MP01023 1474 aa10.87□□□□□ -0.67
PCM1-221ENST00000524203 CLIP1P30622 1438 aa10.87□□□□□ -0.67
PCM1-221ENST00000524203 DEPDC5O75140 1603 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms