RNA–Protein interactions for RNA: ENST00000524127.5

CTNNA1-241, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 483 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-241ENST00000524127 BCL11AQ9H165 835 aa7.03□□□□□ -1.28
CTNNA1-241ENST00000524127 ABCA9Q8IUA7 1624 aa7.02□□□□□ -1.29
CTNNA1-241ENST00000524127 KCNH8Q96L42 1107 aa7.02□□□□□ -1.29
CTNNA1-241ENST00000524127 TTC37Q6PGP7 1564 aa7.02□□□□□ -1.29
CTNNA1-241ENST00000524127 KDM6BO15054 1643 aa7.01□□□□□ -1.29
CTNNA1-241ENST00000524127 KIF14Q15058 1648 aa7.01□□□□□ -1.29
CTNNA1-241ENST00000524127 HECW1Q76N89 1606 aa7.01□□□□□ -1.29
CTNNA1-241ENST00000524127 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.01□□□□□ -1.296e-6■■■■■ 38.2
CTNNA1-241ENST00000524127 FMN1Q68DA7 1419 aa7□□□□□ -1.29
CTNNA1-241ENST00000524127 CASKIN1Q8WXD9 1431 aa7□□□□□ -1.29
CTNNA1-241ENST00000524127 NEFLP07196 543 aa6.99□□□□□ -1.29
CTNNA1-241ENST00000524127 MYT1LQ9UL68 1186 aa6.99□□□□□ -1.29
CTNNA1-241ENST00000524127 CD109Q6YHK3 1445 aa6.99□□□□□ -1.29
CTNNA1-241ENST00000524127 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.98□□□□□ -1.29
CTNNA1-241ENST00000524127 PPP1R15AO75807 674 aaPredicted RBP6.98□□□□□ -1.29
CTNNA1-241ENST00000524127 KANK4Q5T7N3 995 aaPredicted RBP6.98□□□□□ -1.29
CTNNA1-241ENST00000524127 ERICH6BQ5W0A0 696 aa6.98□□□□□ -1.29
CTNNA1-241ENST00000524127 SETD5Q9C0A6 1442 aa6.98□□□□□ -1.29
CTNNA1-241ENST00000524127 FRMPD1Q5SYB0 1578 aa6.98□□□□□ -1.29
CTNNA1-241ENST00000524127 RAB3GAP2Q9H2M9 1393 aa6.97□□□□□ -1.29
CTNNA1-241ENST00000524127 FKBP8Q14318 412 aa6.97□□□□□ -1.29
CTNNA1-241ENST00000524127 RBM19Q9Y4C8 960 aaKnown RBP6.97□□□□□ -1.29
CTNNA1-241ENST00000524127 FYCO1Q9BQS8 1478 aa6.97□□□□□ -1.29
CTNNA1-241ENST00000524127 FANCIQ9NVI1 1328 aa6.97□□□□□ -1.29
CTNNA1-241ENST00000524127 CDC42BPBQ9Y5S2 1711 aa6.96□□□□□ -1.29
CTNNA1-241ENST00000524127 TIAM1Q13009 1591 aa6.96□□□□□ -1.29
CTNNA1-241ENST00000524127 TROQ12816 1431 aaPredicted RBP6.95□□□□□ -1.3
CTNNA1-241ENST00000524127 ATP1B4Q9UN42 357 aaPredicted RBP6.95□□□□□ -1.3
CTNNA1-241ENST00000524127 CDC42BPAQ5VT25 1732 aa6.95□□□□□ -1.3
CTNNA1-241ENST00000524127 RICTORQ6R327 1708 aa6.95□□□□□ -1.3
CTNNA1-241ENST00000524127 SIGLEC1Q9BZZ2 1709 aa6.95□□□□□ -1.3
CTNNA1-241ENST00000524127 TEX14Q8IWB6 1497 aa6.94□□□□□ -1.3
CTNNA1-241ENST00000524127 MYO5CQ9NQX4 1742 aa6.94□□□□□ -1.3
CTNNA1-241ENST00000524127 PLEKHD1A6NEE1 506 aa6.94□□□□□ -1.3
CTNNA1-241ENST00000524127 ARAP3Q8WWN8 1544 aa6.94□□□□□ -1.3
CTNNA1-241ENST00000524127 CCDC18Q5T9S5 1454 aa6.92□□□□□ -1.3
CTNNA1-241ENST00000524127 LRRC9Q6ZRR7 1453 aa6.92□□□□□ -1.3
CTNNA1-241ENST00000524127 NEO1Q92859 1461 aa6.92□□□□□ -1.3
CTNNA1-241ENST00000524127 ARHGEF12Q9NZN5 1544 aa6.92□□□□□ -1.3
CTNNA1-241ENST00000524127 PREX2Q70Z35 1606 aa6.92□□□□□ -1.3
CTNNA1-241ENST00000524127 ANP32CO43423 234 aa6.92□□□□□ -1.3
CTNNA1-241ENST00000524127 RAPGEF3O95398 923 aa6.92□□□□□ -1.3
CTNNA1-241ENST00000524127 PLCH2O75038 1416 aa6.92□□□□□ -1.3
CTNNA1-241ENST00000524127 AKNAQ7Z591 1439 aa6.92□□□□□ -1.3
CTNNA1-241ENST00000524127 KDM4FA0A1W2PPD8 638 aa6.91□□□□□ -1.3
CTNNA1-241ENST00000524127 FANCAO15360 1455 aa6.91□□□□□ -1.3
CTNNA1-241ENST00000524127 DDX10Q13206 875 aaKnown RBP6.9□□□□□ -1.3
CTNNA1-241ENST00000524127 GPATCH8Q9UKJ3 1502 aaKnown RBP6.9□□□□□ -1.31
CTNNA1-241ENST00000524127 YEATS2Q9ULM3 1422 aa6.89□□□□□ -1.31
CTNNA1-241ENST00000524127 SAMD9LQ8IVG5 1584 aa6.89□□□□□ -1.31
CTNNA1-241ENST00000524127 ITSN2Q9NZM3 1697 aa6.88□□□□□ -1.31
CTNNA1-241ENST00000524127 ABCC1P33527 1531 aa6.88□□□□□ -1.31
CTNNA1-241ENST00000524127 ZMYM4Q5VZL5 1548 aa6.88□□□□□ -1.31
CTNNA1-241ENST00000524127 BCANQ96GW7 911 aa6.88□□□□□ -1.31
CTNNA1-241ENST00000524127 CDK11AQ9UQ88 783 aaPredicted RBP6.88□□□□□ -1.31
CTNNA1-241ENST00000524127 CFAP74Q9C0B2 1584 aa6.87□□□□□ -1.31
CTNNA1-241ENST00000524127 ARHGAP5Q13017 1502 aa6.87□□□□□ -1.31
CTNNA1-241ENST00000524127 EHBP1L1Q8N3D4 1523 aa6.87□□□□□ -1.31
CTNNA1-241ENST00000524127 ARHGEF40Q8TER5 1519 aa6.87□□□□□ -1.31
CTNNA1-241ENST00000524127 DENND4BO75064 1496 aaPredicted RBP6.87□□□□□ -1.31
CTNNA1-241ENST00000524127 ADGRL1O94910 1474 aa6.87□□□□□ -1.31
CTNNA1-241ENST00000524127 POGZQ7Z3K3 1410 aa6.87□□□□□ -1.31
CTNNA1-241ENST00000524127 SCAPERQ9BY12 1400 aa6.87□□□□□ -1.31
CTNNA1-241ENST00000524127 TRAPPC8Q9Y2L5 1435 aa6.87□□□□□ -1.31
CTNNA1-241ENST00000524127 PHLDB1Q86UU1 1377 aa6.87□□□□□ -1.31
CTNNA1-241ENST00000524127 KDM5CP41229 1560 aa6.86□□□□□ -1.31
CTNNA1-241ENST00000524127 ZNF644Q9H582 1327 aaPredicted RBP6.86□□□□□ -1.31
CTNNA1-241ENST00000524127 KIDINS220Q9ULH0 1771 aa6.86□□□□□ -1.31
CTNNA1-241ENST00000524127 NCOA2Q15596 1464 aa6.85□□□□□ -1.31
CTNNA1-241ENST00000524127 CACNB1Q02641 598 aaPredicted RBP6.85□□□□□ -1.31
CTNNA1-241ENST00000524127 AFAP1Q8N556 730 aa6.85□□□□□ -1.31
CTNNA1-241ENST00000524127 ABCA6Q8N139 1617 aa6.85□□□□□ -1.31
CTNNA1-241ENST00000524127 SYCP2Q9BX26 1530 aa6.85□□□□□ -1.31
CTNNA1-241ENST00000524127 SUPT6HQ7KZ85 1726 aaKnown RBP6.84□□□□□ -1.31
CTNNA1-241ENST00000524127 MTUS2Q5JR59 1369 aa6.84□□□□□ -1.31
CTNNA1-241ENST00000524127 ADAMTSL3P82987 1691 aa6.84□□□□□ -1.31
CTNNA1-241ENST00000524127 DIP2CQ9Y2E4 1556 aa6.84□□□□□ -1.31
CTNNA1-241ENST00000524127 EFCAB2Q5VUJ9 269 aa6.84□□□□□ -1.31
CTNNA1-241ENST00000524127 ERICH6Q7L0X2 663 aa6.84□□□□□ -1.31
CTNNA1-241ENST00000524127 SIN3AQ96ST3 1273 aa6.84□□□□□ -1.31
CTNNA1-241ENST00000524127 PPP4R2Q9NY27 417 aa6.84□□□□□ -1.31
CTNNA1-241ENST00000524127 BCORL1Q5H9F3 1711 aa6.84□□□□□ -1.31
CTNNA1-241ENST00000524127 HFM1A2PYH4 1435 aa6.84□□□□□ -1.32
CTNNA1-241ENST00000524127 TONSLQ96HA7 1378 aa6.83□□□□□ -1.32
CTNNA1-241ENST00000524127 ZFYVE16Q7Z3T8 1539 aa6.83□□□□□ -1.32
CTNNA1-241ENST00000524127 MBD5Q9P267 1494 aa6.83□□□□□ -1.32
CTNNA1-241ENST00000524127 HECW2Q9P2P5 1572 aa6.82□□□□□ -1.32
CTNNA1-241ENST00000524127 ITGAEP38570 1179 aa6.82□□□□□ -1.32
CTNNA1-241ENST00000524127 HNRNPMP52272 730 aaKnown RBP eCLIP6.82□□□□□ -1.327e-14■■■■■ 45.2
CTNNA1-241ENST00000524127 TRIM52Q96A61 297 aa6.82□□□□□ -1.32
CTNNA1-241ENST00000524127 MADDQ8WXG6 1647 aa6.82□□□□□ -1.32
CTNNA1-241ENST00000524127 INO80Q9ULG1 1556 aaPredicted RBP6.82□□□□□ -1.32
CTNNA1-241ENST00000524127 ZNF518AQ6AHZ1 1483 aa6.81□□□□□ -1.32
CTNNA1-241ENST00000524127 MLH3Q9UHC1 1453 aa6.81□□□□□ -1.32
CTNNA1-241ENST00000524127 ZNF777Q9ULD5 760 aaPredicted RBP6.81□□□□□ -1.32
CTNNA1-241ENST00000524127 FGD6Q6ZV73 1430 aa6.81□□□□□ -1.32
CTNNA1-241ENST00000524127 CAMSAP2Q08AD1 1489 aa6.8□□□□□ -1.32
CTNNA1-241ENST00000524127 MAGI2Q86UL8 1455 aa6.8□□□□□ -1.32
CTNNA1-241ENST00000524127 PTPN23Q9H3S7 1636 aa6.8□□□□□ -1.32
CTNNA1-241ENST00000524127 FAM50AQ14320 339 aaKnown RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms